AT2G43420

Gene Details

Gene ID: AT2G43420
Gene Symbol: RTN20
Gene Name: reticulon 20
Description: 3-beta hydroxysteroid dehydrogenase/isomerase family protein;(source:Araport11)
TAIR Accession: locus:2058223
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)

GO:0103067 — enables — 4alpha-carboxy-5alpha-cholesta-8-en-3beta-ol:NAD(P)+ 3-dehydrogenase (decarboxylating) activity
GO:0103066 — enables — 4alpha-carboxy-4beta-methyl-5alpha-cholesta-8-en-3beta-ol:NAD(P)+ 3-oxidoreductase (decarboxylating) activity
GO:0005783 — located in — endoplasmic reticulum
GO:0010468 — acts upstream of or within — regulation of gene expression
GO:0047012 — enables — sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity
GO:0005515 — enables — protein binding
GO:0071669 — acts upstream of or within — plant-type cell wall organization or biogenesis
GO:0036211 — acts upstream of or within — protein modification process
GO:0016616 — enables — oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0000252 — enables — C-3 sterol dehydrogenase (C-4 sterol decarboxylase) activity
GO:0003854 — enables — 3-beta-hydroxy-delta5-steroid dehydrogenase activity
GO:0043170 — acts upstream of or within — macromolecule metabolic process
GO:0009506 — located in — plasmodesma
GO:0009888 — acts upstream of or within — tissue development

Functional Keywords

Literature and News

Gene Resources

Homologs

Sequences

cDNA Sequence

>AT2G43420.1
AGATAATTTACATAAATTAAGTCAAATCCATAGATTTATGGCAAAAAAGTGTGAATATTAAATTATAATTACACAGCCGAAGAATAAAGGAAAACGCTAAAAGGTTGCGCGAGTGGAGAGTCTGCCCGCCAAGCAACCCCTAGTATTCAGCTTTTTGTGCACTGATCCAACTCGACTCGGCCTTTTTCTCTGAGTTGACTCGACCGAGAAAAGGCGATAGAGCTGGGGTTTAATTCGGCGATAACAATGGACGAAGATTCCGTCCATGGCGATTCTCACCTCAAGACATGTGTCGTCCTCGGCGGACGAGGGTTCATTGGTCGATCGCTTGTCTCCAGATTGCTTCGTCTCGGAAACTGGACAGTCCGAGTCGCAGATTCCGGTCACACTCTCCATCTTGATGAATCCGATTCGCTCCTCGAGGATGCTCTCTCCTCCGGCCGCGCTTCTTATCACTGCGTCGATGTTCGTGATAAACCTCAGATCGTTAAAGTTACCGAGGGTTCCTATGTTGTATTTTACATGGGAGCTACTGATTTACGTTCCCATGATTACTTTGACTGCTACAAGGTTATAGTTCAAGGTACAAGAAATGTGATTTCTGCCTGTCGTGAATCTGGAGTCAGAAAACTTATCTACAACAGTACAGCTGATGTTGTTTTTGATGGTTCCCAACCTATACGTGATGGTGATGAATCCTTGAGACGTCCTTTGAAGTTCCAATCTATGTTGACAGACTTCAAAGCTCAAGCAGAAGCGTTGATCAAATTGGCTAACAACCGAGATGGTCTCTTAACTTGTGCACTTCGCTCTAGCATTGTATTTGGACCTGGTGACACAGAGTTTGTACCTTTTTTGGTGAATCTAGCCAAGTCCGGATATGCAAAGTTTATACTCGGGAGTGGTGAAAATATCTCTGATTTCACTTACTCGGAGAACGTTTCTCATGCACATATTTGCGCCGTTAAAGCATTAGATTCACAGATGGAGTTTGTGGCTGGAAAGGAATTTTTTATCACAAACCTCAAGCCGGTCAGATTTTGGGACTTTGTAAGCCATATAGTTGAAGGTCTGGGATACCCAAGACCATCCATTAAACTTCCTGTTCGGCTGGTTTTGTATGTTTTCTCACTTCTTAAGTGGACACATGAAAAGGAGGGCCTTGGGAGTAATTATGACACAGCACATCAGTATGCTCTGTTAGCTTCATCAACGAGAACTTTTAACTGCAATGCAGCTAAGAAGCATCTTGGTTACACACCTGTTGTGACACTTGAAGATGGTATTGCATCAACGCTTCAATGGTTCTCTCGGGATCTTGAGAAGTCTGATGACACAATCATTCAATCTACTGCAGATCAGCTTCTTGGTTGTGGGAAAGTTGCAGACATCTTGCTGTGGAGAAATGAGAAGAAAACCTTCGTTTCTTTTCTTGTCCTAAACTTGTTTTATTACTGGTTCTTCTTTTCTGGAAACACATTTACTTCATCTGCAGCCCAACTTCTGTTTATATTTGCTGTTGCTCTCTATGGAGTCTCTTTTGTGCCGTCAAAGATTTTCGGGTTTCAAGTCAACAAAATACCCCCATGGAGATTTGAGATCTCCGAATCCGCTGTGAGAGATCTTAGTAGTGATATCGTAGTTGTCTGGAATCAAGGAGTTCGCAGTTTTAAATCCTTAAGCAGTGGAGGAGACTGGATCAAGTTCTTCAAGATTGCAGGATCACTGTATCTCCTCAAACTGATTGTATCCCGTTCATTGGCAGCATTTCTTTTCACAGTTATGTCGTTCTCATTCACCGGTTTCTTCATCTACGAGCAATACGAGCTTGAGCTCTACCACCTAGCCCGGATATTCGTCGAATGCTTAACATTTATTAAAAGGATGGTGATACCTGTTTCTGATGCTTCATCTAAACCAATGTTCATGTGAAGCTTCCAAAGTCCTCCACTAAACGAACACCAACAATCCCAGAGACTAATTGCAGTTATTAGATGTCTTATGTACAAACATTATGCTATCAGGATGTAATCTTCACTGAGAGGGGATGGATATATGATTATTTACGAATTTGCCATAACTACTATCAAAATGCACCGTTTTGATCCGGTTTCCAAAAAAAAAAGAAAAAAAAGGAAAGTATCCTTATATATCCTT

CDS Sequence

>AT2G43420.1
ATGGACGAAGATTCCGTCCATGGCGATTCTCACCTCAAGACATGTGTCGTCCTCGGCGGACGAGGGTTCATTGGTCGATCGCTTGTCTCCAGATTGCTTCGTCTCGGAAACTGGACAGTCCGAGTCGCAGATTCCGGTCACACTCTCCATCTTGATGAATCCGATTCGCTCCTCGAGGATGCTCTCTCCTCCGGCCGCGCTTCTTATCACTGCGTCGATGTTCGTGATAAACCTCAGATCGTTAAAGTTACCGAGGGTTCCTATGTTGTATTTTACATGGGAGCTACTGATTTACGTTCCCATGATTACTTTGACTGCTACAAGGTTATAGTTCAAGGTACAAGAAATGTGATTTCTGCCTGTCGTGAATCTGGAGTCAGAAAACTTATCTACAACAGTACAGCTGATGTTGTTTTTGATGGTTCCCAACCTATACGTGATGGTGATGAATCCTTGAGACGTCCTTTGAAGTTCCAATCTATGTTGACAGACTTCAAAGCTCAAGCAGAAGCGTTGATCAAATTGGCTAACAACCGAGATGGTCTCTTAACTTGTGCACTTCGCTCTAGCATTGTATTTGGACCTGGTGACACAGAGTTTGTACCTTTTTTGGTGAATCTAGCCAAGTCCGGATATGCAAAGTTTATACTCGGGAGTGGTGAAAATATCTCTGATTTCACTTACTCGGAGAACGTTTCTCATGCACATATTTGCGCCGTTAAAGCATTAGATTCACAGATGGAGTTTGTGGCTGGAAAGGAATTTTTTATCACAAACCTCAAGCCGGTCAGATTTTGGGACTTTGTAAGCCATATAGTTGAAGGTCTGGGATACCCAAGACCATCCATTAAACTTCCTGTTCGGCTGGTTTTGTATGTTTTCTCACTTCTTAAGTGGACACATGAAAAGGAGGGCCTTGGGAGTAATTATGACACAGCACATCAGTATGCTCTGTTAGCTTCATCAACGAGAACTTTTAACTGCAATGCAGCTAAGAAGCATCTTGGTTACACACCTGTTGTGACACTTGAAGATGGTATTGCATCAACGCTTCAATGGTTCTCTCGGGATCTTGAGAAGTCTGATGACACAATCATTCAATCTACTGCAGATCAGCTTCTTGGTTGTGGGAAAGTTGCAGACATCTTGCTGTGGAGAAATGAGAAGAAAACCTTCGTTTCTTTTCTTGTCCTAAACTTGTTTTATTACTGGTTCTTCTTTTCTGGAAACACATTTACTTCATCTGCAGCCCAACTTCTGTTTATATTTGCTGTTGCTCTCTATGGAGTCTCTTTTGTGCCGTCAAAGATTTTCGGGTTTCAAGTCAACAAAATACCCCCATGGAGATTTGAGATCTCCGAATCCGCTGTGAGAGATCTTAGTAGTGATATCGTAGTTGTCTGGAATCAAGGAGTTCGCAGTTTTAAATCCTTAAGCAGTGGAGGAGACTGGATCAAGTTCTTCAAGATTGCAGGATCACTGTATCTCCTCAAACTGATTGTATCCCGTTCATTGGCAGCATTTCTTTTCACAGTTATGTCGTTCTCATTCACCGGTTTCTTCATCTACGAGCAATACGAGCTTGAGCTCTACCACCTAGCCCGGATATTCGTCGAATGCTTAACATTTATTAAAAGGATGGTGATACCTGTTTCTGATGCTTCATCTAAACCAATGTTCATGTGA

Protein Sequence

>AT2G43420.1
MDEDSVHGDSHLKTCVVLGGRGFIGRSLVSRLLRLGNWTVRVADSGHTLHLDESDSLLEDALSSGRASYHCVDVRDKPQIVKVTEGSYVVFYMGATDLRSHDYFDCYKVIVQGTRNVISACRESGVRKLIYNSTADVVFDGSQPIRDGDESLRRPLKFQSMLTDFKAQAEALIKLANNRDGLLTCALRSSIVFGPGDTEFVPFLVNLAKSGYAKFILGSGENISDFTYSENVSHAHICAVKALDSQMEFVAGKEFFITNLKPVRFWDFVSHIVEGLGYPRPSIKLPVRLVLYVFSLLKWTHEKEGLGSNYDTAHQYALLASSTRTFNCNAAKKHLGYTPVVTLEDGIASTLQWFSRDLEKSDDTIIQSTADQLLGCGKVADILLWRNEKKTFVSFLVLNLFYYWFFFSGNTFTSSAAQLLFIFAVALYGVSFVPSKIFGFQVNKIPPWRFEISESAVRDLSSDIVVVWNQGVRSFKSLSSGGDWIKFFKIAGSLYLLKLIVSRSLAAFLFTVMSFSFTGFFIYEQYELELYHLARIFVECLTFIKRMVIPVSDASSKPMFM