Gene Details:
- Gene ID: AT2G43140
- Gene Symbol: bHLH129
- Gene Name:
- Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein;(source:Araport11)
- TAIR Accession: locus:2041051
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Gene Ontology:
- GO:0010629 — acts upstream of or within — negative regulation of gene expression
- GO:0005634 — located in — nucleus
- GO:0071215 — acts upstream of or within — cellular response to abscisic acid stimulus
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0046983 — enables — protein dimerization activity
Germplasm Phenotype:
- SALK_123812C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:no change,osmotic stress:no change,salt stress:decreased,ABA:no change,hypoxia:ND.
Function-related keywords:
Literature:
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. DOI: 10.1093/molbev/msg088 ; PMID: 12679534
- The Arabidopsis basic/helix-loop-helix transcription factor family. DOI: 10.1105/tpc.013839 ; PMID: 12897250
- Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana. DOI: 10.1105/tpc.151140 ; PMID: 14600211
- Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7(ARR7) overexpression in cytokinin response. DOI: 10.1007/s00438-006-0177-x ; PMID: 17061125
- Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. DOI: 10.1016/j.diff.2010.02.003 ; PMID: 20219281
- An ABA down-regulated bHLH transcription repressor gene, bHLH129 regulates root elongation and ABA response when overexpressed in Arabidopsis. DOI: 10.1038/srep17587 ; PMID: 26625868
- The G-Box Transcriptional Regulatory Code in Arabidopsis. DOI: 10.1104/pp.17.01086 ; PMID: 28864470
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. DOI: 10.1093/molbev/msg088 ; PMID: 12679534
Sequences:
cDNA Sequence
- >AT2G43140.1
TATAGTATTAATTAATAACTACTCAAAGTCTCTTTCTCTCAAACCCTCTCCTCAAGATTTTTTCCTAAGCATCAGATTAGCTTTTGTAGGGTTTTTCTTTTCCGGTTTCATGTACCCTCCTAATTCCTCTAAGTCCACCGCTCATGACGGCGGCGGCGATGCCGACACCAATCAATATGACTCAGCCGCTGGAGCTACCCGTGATTTCTCCTCTCTTGGCCCTCAAACCCACCATCATCCGCCACCGCAGCGGCAGCAGCAGCATCAGCAGAATCCCAACCTCGTCGGCCATTATTTACCGGGCGAGCCATCTTCCATCGGATTCGATTCCAACGCTTCTTCTTCGTCTTCTTTGTTCCGACACAGAAGCTCTCCGGCTGGATTCTACGACCAACATCTTCCCACTGATCCCAACGGTAACTTTTTCGTTTCTTTATTTTTCCAACTTTTTTTTCACCCCACCAAAGAGTTCTCCTCCTAATTAATTGGATTTAATTAGTGCTGAATCTAGTCGACATAATTTACATATTATACAATTATACACATATCAAGAATTTTTTTTTTAAGTGTTCAACTTTTTTTGCACATTAAAAAATTTGTTACAACATTTAATAAATATATGTTTCCTATAAGTTAGACAAATTTGGTATAGAAAAAAAAACAAAATTAAAATTCCATATTAGTATTCGAAAACATTTTAAAAAATGAATATGTTATTTTACATCGATAAAGTCGGCAAGTAAATTGGTGTAGCACGTAAGTTTTGACTTACTGTAATCTAAACCATGTAGTCTTGGTTTTGTTTCGATGACTTAAGTAATTTGTCTATAGGTTGGAATTTGTTTGGTTTCCCTCCATACGACTTTTGTTTTGTTTTAATTAAAGACCAATAAGTATCAACCACGTAATTGAAAACCTAATACACATGTAGTTCTCAAAATATATCTATTTGCTTTAGTCAATACTTAATCTATCTCTAGATCTTATACACACCTTTCTCTTTCAGCTTATGTCTGAAGAGATTAACCATGGTTGATCTTAGTCATATGTATACATGTGTACACACGTATATATACATGCATGAATAATCAAATACGTATTTCCAATAGTGGCAAGTTGTTTATTTTAATAATGCAATATAAAACACACACTTGCCAAAAGTATATGTTAAAAAACGAATCGTTACAAAAAGAAATAAAAGTATAGTCCACTTGGAAATAATATATCCATCCCACTTGCTCTTTTTCTTCTGACAAAGCAGCCATGATGGCCTACCCCTGCTGACATGGCTTGATCATGGTCACTATTTTGATTTTTGGATACGCCTACTTGTCATTATATATAATAAGCTTTATTACTATAGTGTTAGTTGCAAGTAATAATTTATATTATTTTTGTGCAATTTGATCTTCGGTTCATTGCATATGTCCGGTTCACATTCCCTGTAATCCATGTGCGAGCCCCAAGAAATTTTACCCCCTCTTGCATTATTATATACATACTACTTTGTATAGTATATGATAGTAATTGGAATTCGAATGGTGAATATTTCTAAGATTCTTTTTCAGGAATCCTTATTCTCTACCAAATTGGCGATAATTAAAATATATATAAGTAGAGAGACTAGAGACAAAGGAAGGGGTCCTCGAGTTTCGAAGACGACCCATTCTCTTCTTATTTTGTACTAAAGATTTTTAAAATCAAACTGGTTATTAAAATACTGAGATAACAAGTTATAAACCTACATTACATTCTTTCTTTCTCTTTCAATCTAAATTTGTTGATGGAAGAAGGAACAGGTTTTTCTCTAGGACGGCCAAACGGAGGCTACGGCGGAGGAGGAGAGCAAGGGCCGTCGAGGTTGAAGTCGGAGCTGAGATTCTCTAGTGGGAGTAGTAGCCATCAAGAACATAATTCTCTACCGCGAATCTCGGAGGTTGAAGCGGCTGCAGCGGCTAGAAACGGTGTCGCATCAAGTAGTATGAGTTTTGGAAATAATCGTACTAACAATTGGGACAACTCGTCTTCTCATATCAGTTTCACCATTGATCAACCCGGAAAACGGTCCAAGAACTCCGACTTTTTCACCTTAGAAACTCAGTATAGCATGCCGCAAACAACTCTGGAAATGGCGACAATGGAGAACTTGATGAACATCCCAGAGGACTCGGTGCCTTGTAGGGCTAGAGCCAAGCGCGGCTTCGCGACTCACCCACGCAGCATTGCTGAAAGGGAGAGAAGAACGAGGATAAGCGGGAAGCTGAAGAAGCTACAAGAACTTGTGCCTAATATGGACAAGCAAACGAGCTACGCAGATATGTTGGATTTGGCTGTTGAGCATATCAAAGGTCTTCAGCACCAAGTAGAGTCACTGGAAAAGGGAATGGAGAGATGTACTTGTGGGGCATGCAAGAAGCGATGATGAATGATATTGTTCCAAGTATGATGCAATAAAGTATAGAAGAAAAGGAGATCACTTACGAACCAAATTCTAAGACAGAAAGAAACATAGCAAAAAGGAGTTATTTTGGAGGTCTAAAGAAAGTGATGATGGATTAATGAAGGCTGGTTTTGTTACTCTCTGAAAGTCTTGACCTTTATTATAACTTAAAATTCGATCAATCGATTTTTTTTTTCCTGTTTTCCTCAAAGTTGGTTAATTTTAGCTTAGAGCAAAACCCATTATTTGAGATTGAAAGAGATGCGCGTTTGTGTGTGTGAATATAATCCTACGTTTTGAATTTTGATCTGTGAATAAAAATCTCAGAAAAACATCAGGAGGATCATAGTTGTTTTCAACAAATGTATATAAAATAAAACCTTAATTGAACCAAATTCATTATTTCAA - >AT2G43140.2
TATAGTATTAATTAATAACTACTCAAAGTCTCTTTCTCTCAAACCCTCTCCTCAAGATTTTTTCCTAAGCATCAGATTAGCTTTTGTAGGGTTTTTCTTTTCCGGTTTCATGTACCCTCCTAATTCCTCTAAGTCCACCGCTCATGACGGCGGCGGCGATGCCGACACCAATCAATATGACTCAGCCGCTGGAGCTACCCGTGATTTCTCCTCTCTTGGCCCTCAAACCCACCATCATCCGCCACCGCAGCGGCAGCAGCAGCATCAGCAGAATCCCAACCTCGTCGGCCATTATTTACCGGGCGAGCCATCTTCCATCGGATTCGATTCCAACGCTTCTTCTTCGTCTTCTTTGTTCCGACACAGAAGCTCTCCGGCTGGATTCTACGACCAACATCTTCCCACTGATCCCAACGGTAACTTTTTCGTTTCTTTATTTTTCCAACTTTTTTTTCACCCCACCAAAGAGTTCTCCTCCTAATTAATTGGATTTAATTAGTGCTGAATCTAGTCGACATAATTTACATATTATACAATTATACACATATCAAGAATTTTTTTTTTAAGTGTTCAACTTTTTTTGCACATTAAAAAATTTGTTACAACATTTAATAAATATATGTTTCCTATAAGTTAGACAAATTTGGTATAGAAAAAAAAACAAAATTAAAATTCCATATTAGTATTCGAAAACATTTTAAAAAATGAATATGTTATTTTACATCGATAAAGTCGGCAAGTAAATTGGTGTAGCACGTAAGTTTTGACTTACTGTAATCTAAACCATGTAGTCTTGGTTTTGTTTCGATGACTTAAGTAATTTGTCTATAGGTTGGAATTTGTTTGGTTTCCCTCCATACGACTTTTGTTTTGTTTTAATTAAAGACCAATAAGTATCAACCACGTAATTGAAAACCTAATACACATGTAGTTCTCAAAATATATCTATTTGCTTTAGTCAATACTTAATCTATCTCTAGATCTTATACACACCTTTCTCTTTCAGCTTATGTCTGAAGAGATTAACCATGGTTGATCTTAGTCATATGTATACATGTGTACACACGTATATATACATGCATGAATAATCAAATACGTATTTCCAATAGTGGCAAGTTGTTTATTTTAATAATGCAATATAAAACACACACTTGCCAAAAGTATATGTTAAAAAACGAATCGTTACAAAAAGAAATAAAAGTATAGTCCACTTGGAAATAATATATCCATCCCACTTGCTCTTTTTCTTCTGACAAAGCAGCCATGATGGCCTACCCCTGCTGACATGGCTTGATCATGGTCACTATTTTGATTTTTGGATACGCCTACTTGTCATTATATATAATAAGCTTTATTACTATAGTGTTAGTTGCAAGTAATAATTTATATTATTTTTGTGCAATTTGATCTTCGGTTCATTGCATATGTCCGGTTCACATTCCCTGTAATCCATGTGCGAGCCCCAAGAAATTTTACCCCCTCTTGCATTATTATATACATACTACTTTGTATAGTATATGATAGTAATTGGAATTCGAATGGTGAATATTTCTAAGATTCTTTTTCAGGAATCCTTATTCTCTACCAAATTGGCGATAATTAAAATATATATAAGTAGAGAGACTAGAGACAAAGGAAGGGGTCCTCGAGTTTCGAAGACGACCCATTCTCTTCTTATTTTGTACTAAAGATTTTTAAAATCAAACTGGTTATTAAAATACTGAGATAACAAGTTATAAACCTACATTACATTCTTTCTTTCTCTTTCAATCTAAATTTGTTGATGGAAGAAGGAACAGGTTTTTCTCTAGGACGGCCAAACGGAGGCTACGGCGGAGGAGGAGAGCAAGGGCCGTCGAGGTTGAAGTCGGAGCTGAGATTCTCTAGTGGGAGTAGTAGCCATCAAGAACATAATTCTCTACCGCGAATCTCGGAGGTTGAAGCGGCTGCAGCGGCTAGAAACGGTGTCGCATCAAGTAGTATGAGTTTTGGAAATAATCGTACTAACAATTGGGACAACTCGTCTTCTCATATCAGTTTCACCATTGATCAACCCGGAAAACGGTCCAAGAACTCCGACTTTTTCACCTTAGAAACTCAGTATAGCATGCCGCAAACAACTCTGGAAATGGCGACAATGGAGAACTTGATGAACATCCCAGAGGACTCGGTGCCTTGTAGGGCTAGAGCCAAGCGCGGCTTCGCGACTCACCCACGCAGCATTGCTGAAAGGGAGAGAAGAACGAGGATAAGCGGGAAGCTGAAGAAGCTACAAGAACTTGTGCCTAATATGGACAAGCAAACGAGCTACGCAGATATGTTGGATTTGGCTGTTGAGCATATCAAAGGTCTTCAGCACCAAGTAGAGTCACTGGAAAAGGGAATGGAGAGATGTACTTGTGGGGCATGCAAGAAGCGATGATGAATGATATTGTTCCAAGTATGATGCAATAAAGTATAGAAGAAAAGGAGATCACTTACGAACCAAATTCTAAGACAGAAAGAAACATAGCAAAAAGGAGTTATTTTGGAGGTCTAAAGAAAGTGATGATGGATTAATGAAGGCTGGTTTTGTTACTCTCTGAAAGTCTTGACCTTTATTATAACTTAAAATTCGATCAATCGATTTTTTTTTTCCTGTTTTCCTCAAAGTTGGTTAATTTTAGCTTAGAGCAAAACCCATTATTTGAGATTGAAAGAGATGCGCGTTTGTGTGTGTGAATATAATCCTACGTTTTGAATTTTGATCTGTGAATAAAAATCTCAGAAAAACATCAGGAGGATCATAGTTGTTTTCAACAAATGTATATAAAATAAAACCTTAATTGAACCAAATTCATTATTTCAA
CDS Sequence
- >AT2G43140.1
ATGGAAGAAGGAACAGGTTTTTCTCTAGGACGGCCAAACGGAGGCTACGGCGGAGGAGGAGAGCAAGGGCCGTCGAGGTTGAAGTCGGAGCTGAGATTCTCTAGTGGGAGTAGTAGCCATCAAGAACATAATTCTCTACCGCGAATCTCGGAGGTTGAAGCGGCTGCAGCGGCTAGAAACGGTGTCGCATCAAGTAGTATGAGTTTTGGAAATAATCGTACTAACAATTGGGACAACTCGTCTTCTCATATCAGTTTCACCATTGATCAACCCGGAAAACGGTCCAAGAACTCCGACTTTTTCACCTTAGAAACTCAGTATAGCATGCCGCAAACAACTCTGGAAATGGCGACAATGGAGAACTTGATGAACATCCCAGAGGACTCGGTGCCTTGTAGGGCTAGAGCCAAGCGCGGCTTCGCGACTCACCCACGCAGCATTGCTGAAAGGGAGAGAAGAACGAGGATAAGCGGGAAGCTGAAGAAGCTACAAGAACTTGTGCCTAATATGGACAAGCAAACGAGCTACGCAGATATGTTGGATTTGGCTGTTGAGCATATCAAAGGTCTTCAGCACCAAGTAGAGTCACTGGAAAAGGGAATGGAGAGATGTACTTGTGGGGCATGCAAGAAGCGATGA - >AT2G43140.2
ATGGAAGAAGGAACAGGTTTTTCTCTAGGACGGCCAAACGGAGGCTACGGCGGAGGAGGAGAGCAAGGGCCGTCGAGGTTGAAGTCGGAGCTGAGATTCTCTAGTGGGAGTAGTAGCCATCAAGAACATAATTCTCTACCGCGAATCTCGGAGGTTGAAGCGGCTGCAGCGGCTAGAAACGGTGTCGCATCAAGTAGTATGAGTTTTGGAAATAATCGTACTAACAATTGGGACAACTCGTCTTCTCATATCAGTTTCACCATTGATCAACCCGGAAAACGGTCCAAGAACTCCGACTTTTTCACCTTAGAAACTCAGTATAGCATGCCGCAAACAACTCTGGAAATGGCGACAATGGAGAACTTGATGAACATCCCAGAGGACTCGGTGCCTTGTAGGGCTAGAGCCAAGCGCGGCTTCGCGACTCACCCACGCAGCATTGCTGAAAGGGAGAGAAGAACGAGGATAAGCGGGAAGCTGAAGAAGCTACAAGAACTTGTGCCTAATATGGACAAGCAAACGAGCTACGCAGATATGTTGGATTTGGCTGTTGAGCATATCAAAGGTCTTCAGCACCAAGTAGAGTCACTGGAAAAGGGAATGGAGAGATGTACTTGTGGGGCATGCAAGAAGCGATGA
Protein Sequence
- >AT2G43140.1
MEEGTGFSLGRPNGGYGGGGEQGPSRLKSELRFSSGSSSHQEHNSLPRISEVEAAAAARNGVASSSMSFGNNRTNNWDNSSSHISFTIDQPGKRSKNSDFFTLETQYSMPQTTLEMATMENLMNIPEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVESLEKGMERCTCGACKKR - >AT2G43140.2
MEEGTGFSLGRPNGGYGGGGEQGPSRLKSELRFSSGSSSHQEHNSLPRISEVEAAAAARNGVASSSMSFGNNRTNNWDNSSSHISFTIDQPGKRSKNSDFFTLETQYSMPQTTLEMATMENLMNIPEDSVPCRARAKRGFATHPRSIAERERRTRISGKLKKLQELVPNMDKQTSYADMLDLAVEHIKGLQHQVESLEKGMERCTCGACKKR