Information report for AT2G43090
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0009098 — involved in — leucine biosynthetic process
- GO:0009098 — acts upstream of or within — leucine biosynthetic process
- GO:0009507 — located in — chloroplast
- GO:0009570 — located in — chloroplast stroma
- GO:0009536 — located in — plastid
- GO:0009658 — acts upstream of or within — chloroplast organization
- GO:0019761 — acts upstream of or within — glucosinolate biosynthetic process
- GO:0005739 — located in — mitochondrion
- GO:0048229 — involved in — gametophyte development
- GO:0003861 — enables — 3-isopropylmalate dehydratase activity
Functional Keywords
Literature and News
- Transcriptional profiling of Arabidopsis tissues reveals the unique characteristics of the pollen transcriptome. DOI: 10.1104/pp.103.028241 ; PMID: 14500793
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Retrograde plastid redox signals in the expression of nuclear genes for chloroplast proteins of Arabidopsis thaliana. DOI: 10.1074/jbc.M406358200 ; PMID: 15561727
- Stress-induced protein S-glutathionylation in Arabidopsis. DOI: 10.1104/pp.104.058917 ; PMID: 16055689
- Identification of Arabidopsis salt and osmotic stress responsive proteins using two-dimensional difference gel electrophoresis and mass spectrometry. DOI: 10.1002/pmic.200401282 ; PMID: 16254930
- Coordinated activation of metabolic pathways for antioxidants and defence compounds by jasmonates and their roles in stress tolerance in Arabidopsis. DOI: 10.1111/j.1365-313X.2005.02560.x ; PMID: 16262714
- Alternative and effective proteomic analysis in Arabidopsis. DOI: 10.1002/pmic.200700346 ; PMID: 17828791
- The small subunit 1 of the Arabidopsis isopropylmalate isomerase is required for normal growth and development and the early stages of glucosinolate formation. DOI: 10.1371/journal.pone.0091071 ; PMID: 24608865
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- as Well as Plastid Type-Specific Expression Define the Roles of Distinct Small Subunits of Isopropylmalate Isomerase. DOI: 10.3389/fpls.2020.00808 ; PMID: 32612621
- Comparative proteomic analysis of NaCl stress-responsive proteins in Arabidopsis roots. DOI: 10.1093/jxb/erm207 ; PMID: 17916636
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts. DOI: 10.1074/mcp.M500180-MCP200 ; PMID: 16207701
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: F4IQ61
- EMBL: CP002685
- AlphaFoldDB: F4IQ61
- EnsemblPlants: AT2G43090.2
- Gramene: AT2G43090.2
- ExpressionAtlas: AT2G43090
- InterPro: IPR015928, IPR050075
- PANTHER: PTHR43345, PTHR43345:SF2
- SUPFAM: SSF52016
- Gene3D: 3.20.19.10
- OrthoDB: F4IQ61
- SWISS-MODEL: F4IQ61
Sequences
cDNA Sequence
- >AT2G43090.2
AATCTTGACCACAGCAAAGAGAAACAAACAATGGCGGCTTCTCTGCAATCAGCAAACCCTACATTGTCACGAACCCTAGCTTCTCCGAACAAACCTTCCTCCTTCGCCACCTTCCGATCTCCATTTCTCAGATTCAATTCAACATCCGTCGCTTCCAATTTCAAACCCCTAGTTTCTCGAGAAGCATCCTCATCGTTCGTCACTCGCTCCGCCGCCGAGCCACAAGAAAGAAAAACCTTCCATGGACTGTGCTATGTCGTCGGCGACAACATCGACACTGACCAAATCATTCCCGCGGAGTTTCTCACTCTCGTCCCTTCGAATCCAGAGGAATACGAGAAACTCGGTTCTTACGCTTTAGTTGGTCTTCCAGCTTCTTACAAGGAACGATTCGTTCAGCCAGGAGCAGCGGGAGCTAAAGCAGTGGTGGCTCAGTCTTATGCTAGAATCTTTTTCAGGAACTCTGTTGCTACTGGTGAGGTTTATCCTTTGGATTCTGAAGTTAGGGTTTGTGATGAGTGTACAACTGGTGATGTTGCGACTGTTGAGTTGAGGGAAGGAGATAGTATTTTGATCAATCATACGACTGGGAAAGAGTACAAGCTTAAGCCGATTGGTGATGCTGGACCAGTGATTGATGCTGGTGGTATATTTGCTTATGCTAGGAAAGCTGGAATGATTCCATCTGCTGCTGCTTGATTTTGACTTCAGGTGTCAATGGAAGTGCATGAGAGTCACTTCAAGGATCTTGATCCAATAATAAGAATATGTAATGTTTCCAAAAGCTTATGAACCTAATCTATGTTTTATGAATATATATGACTATCGGCTTTAGTCTTCAGTATCAGTTTCTTGTTTACATTTGGATGTATCAGCTGCTAAAAAAATGCATAGTTTCCCATCCCATTTGAAACGACGTTTTCTCTCATGTCTTCCACTAATATAATCTTCTGGTCATG - >AT2G43090.1
AATCTTGACCACAGCAAAGAGAAACAAACAATGGCGGCTTCTCTGCAATCAGCAAACCCTACATTGTCACGAACCCTAGCTTCTCCGAACAAACCTTCCTCCTTCGCCACCTTCCGATCTCCATTTCTCAGATTCAATTCAACATCCGTCGCTTCCAATTTCAAACCCCTAGTTTCTCGAGAAGCATCCTCATCGTTCGTCACTCGCTCCGCCGCCGAGCCACAAGAAAGAAAAACCTTCCATGGACTGTGCTATGTCGTCGGCGACAACATCGACACTGACCAAATCATTCCCGCGGAGTTTCTCACTCTCGTCCCTTCGAATCCAGAGGAATACGAGAAACTCGGTTCTTACGCTTTAGTTGGTCTTCCAGCTTCTTACAAGGAACGATTCGTTCAGCCAGGAGCAGCGGGAGCTAAAGCAGTGGTGGCTCAGTCTTATGCTAGAATCTTTTTCAGGAACTCTGTTGCTACTGGTGAGGTTTATCCTTTGGATTCTGAAGTTAGGGTTTGTGATGAGTGTACAACTGGTGATGTTGCGACTGTTGAGTTGAGGGAAGGAGATAGTATTTTGATCAATCATACGACTGGGAAAGAGTACAAGCTTAAGCCGATTGGTGATGCTGGACCAGTGATTGATGCTGGTGGTATATTTGCTTATGCTAGGAAAGCTGGAATGATTCCATCTGCTGCTGCTTGATTTTGACTTCAGGTGTCAATGGAAGTGCATGAGAGTCACTTCAAGGATCTTGATCCAATAATAAGAATATGTAATGTTTCCAAAAGCTTATGAACCTAATCTATGTTTTATGAATATATATGACTATCGGCTTTAGTCTTCAGTATCAGTTTCTTGTTTACATTTGGATGTATCAGCTGCTAAAAAAATGCATAGTTTCCCATCCCATTTGAAACGACGTTTTCTCTCATGTCTTCCACTAATATAATCTTCTGGTCATG
CDS Sequence
- >AT2G43090.2
ATGGCGGCTTCTCTGCAATCAGCAAACCCTACATTGTCACGAACCCTAGCTTCTCCGAACAAACCTTCCTCCTTCGCCACCTTCCGATCTCCATTTCTCAGATTCAATTCAACATCCGTCGCTTCCAATTTCAAACCCCTAGTTTCTCGAGAAGCATCCTCATCGTTCGTCACTCGCTCCGCCGCCGAGCCACAAGAAAGAAAAACCTTCCATGGACTGTGCTATGTCGTCGGCGACAACATCGACACTGACCAAATCATTCCCGCGGAGTTTCTCACTCTCGTCCCTTCGAATCCAGAGGAATACGAGAAACTCGGTTCTTACGCTTTAGTTGGTCTTCCAGCTTCTTACAAGGAACGATTCGTTCAGCCAGGAGCAGCGGGAGCTAAAGCAGTGGTGGCTCAGTCTTATGCTAGAATCTTTTTCAGGAACTCTGTTGCTACTGGTGAGGTTTATCCTTTGGATTCTGAAGTTAGGGTTTGTGATGAGTGTACAACTGGTGATGTTGCGACTGTTGAGTTGAGGGAAGGAGATAGTATTTTGATCAATCATACGACTGGGAAAGAGTACAAGCTTAAGCCGATTGGTGATGCTGGACCAGTGATTGATGCTGGTGGTATATTTGCTTATGCTAGGAAAGCTGGAATGATTCCATCTGCTGCTGCTTGA - >AT2G43090.1
ATGGCGGCTTCTCTGCAATCAGCAAACCCTACATTGTCACGAACCCTAGCTTCTCCGAACAAACCTTCCTCCTTCGCCACCTTCCGATCTCCATTTCTCAGATTCAATTCAACATCCGTCGCTTCCAATTTCAAACCCCTAGTTTCTCGAGAAGCATCCTCATCGTTCGTCACTCGCTCCGCCGCCGAGCCACAAGAAAGAAAAACCTTCCATGGACTGTGCTATGTCGTCGGCGACAACATCGACACTGACCAAATCATTCCCGCGGAGTTTCTCACTCTCGTCCCTTCGAATCCAGAGGAATACGAGAAACTCGGTTCTTACGCTTTAGTTGGTCTTCCAGCTTCTTACAAGGAACGATTCGTTCAGCCAGGAGCAGCGGGAGCTAAAGCAGTGGTGGCTCAGTCTTATGCTAGAATCTTTTTCAGGAACTCTGTTGCTACTGGTGAGGTTTATCCTTTGGATTCTGAAGTTAGGGTTTGTGATGAGTGTACAACTGGTGATGTTGCGACTGTTGAGTTGAGGGAAGGAGATAGTATTTTGATCAATCATACGACTGGGAAAGAGTACAAGCTTAAGCCGATTGGTGATGCTGGACCAGTGATTGATGCTGGTGGTATATTTGCTTATGCTAGGAAAGCTGGAATGATTCCATCTGCTGCTGCTTGA
Protein Sequence
- >AT2G43090.2
MAASLQSANPTLSRTLASPNKPSSFATFRSPFLRFNSTSVASNFKPLVSREASSSFVTRSAAEPQERKTFHGLCYVVGDNIDTDQIIPAEFLTLVPSNPEEYEKLGSYALVGLPASYKERFVQPGAAGAKAVVAQSYARIFFRNSVATGEVYPLDSEVRVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDAGGIFAYARKAGMIPSAAA - >AT2G43090.1
MAASLQSANPTLSRTLASPNKPSSFATFRSPFLRFNSTSVASNFKPLVSREASSSFVTRSAAEPQERKTFHGLCYVVGDNIDTDQIIPAEFLTLVPSNPEEYEKLGSYALVGLPASYKERFVQPGAAGAKAVVAQSYARIFFRNSVATGEVYPLDSEVRVCDECTTGDVATVELREGDSILINHTTGKEYKLKPIGDAGPVIDAGGIFAYARKAGMIPSAAA