Gene Details:

• Gene ID: AT2G43060
• Gene Symbol: AtIBH1, IBH1
• Gene Name: ILI1 binding bHLH 1
• Description: ILI1 binding bHLH 1;(source:Araport11)
• TAIR Accession: locus:2053718
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT2G43060.1

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)

Gene Ontology:

• GO:0044248  — acts upstream of or within — cellular catabolic process
• GO:0000976  — enables — transcription cis-regulatory region binding
• GO:0006355  — involved in — regulation of DNA-templated transcription
• GO:0046983  — enables — protein dimerization activity
• GO:0005515  — enables — protein binding
• GO:0009639  — acts upstream of or within — response to red or far red light
• GO:0009651  — acts upstream of or within — response to salt stress
• GO:0036293  — acts upstream of or within — response to decreased oxygen levels
• GO:0009415  — acts upstream of or within — response to water
• GO:0003700  — enables — DNA-binding transcription factor activity
• GO:0009416  — acts upstream of or within — response to light stimulus
• GO:0009741  — acts upstream of or within — response to brassinosteroid
• GO:0005634  — located in — nucleus

Function-related keywords:

• root ,  vascular leaf ,  stamen ,  sepal ,  flower ,  cotyledon ,  hypocotyl ,  collective leaf structure ,  pollen

Literature:

• Arabidopsis transcriptome profiling indicates that multiple regulatory pathways are activated during cold acclimation in addition to the CBF cold response pathway.   DOI:  10.1105/tpc.003483 ;  PMID:  12172015
• The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity.   DOI:  10.1093/molbev/msg088 ;  PMID:  12679534
• Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana.   DOI:  10.1105/tpc.151140 ;  PMID:  14600211
• Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis.   DOI:  10.1104/pp.103.034736 ;  PMID:  15047898
• Plant body weight-induced secondary growth in Arabidopsis and its transcription phenotype revealed by whole-transcriptome profiling.   DOI:  10.1104/pp.104.038844 ;  PMID:  15194820
• A global survey of gene regulation during cold acclimation in Arabidopsis thaliana.   DOI:  10.1371/journal.pgen.0010026 ;  PMID:  16121258
• Analysis of the female gametophyte transcriptome of Arabidopsis by comparative expression profiling.   DOI:  10.1104/pp.105.067314 ;  PMID:  16299181
• Biosynthesis of cellulose-enriched tension wood in Populus: global analysis of transcripts and metabolites identifies biochemical and developmental regulators in secondary wall biosynthesis.   DOI:  10.1111/j.1365-313X.2005.02584.x ;  PMID:  16367961
• Antagonistic HLH/bHLH transcription factors mediate brassinosteroid regulation of cell elongation and plant development in rice and Arabidopsis.   DOI:  10.1105/tpc.109.070441 ;  PMID:  20009022
• A triantagonistic basic helix-loop-helix system regulates cell elongation in Arabidopsis.   DOI:  10.1105/tpc.112.105023 ;  PMID:  23161888
• A triple helix-loop-helix/basic helix-loop-helix cascade controls cell elongation downstream of multiple hormonal and environmental signaling pathways in Arabidopsis.   DOI:  10.1105/tpc.112.105163 ;  PMID:  23221598
• ATBS1 INTERACTING FACTORs negatively regulate Arabidopsis cell elongation in the triantagonistic bHLH system.   DOI:  10.4161/psb.23448 ;  PMID:  23333962
• Antagonistic regulation of growth and immunity by the Arabidopsis basic helix-loop-helix transcription factor homolog of brassinosteroid enhanced expression2 interacting with increased leaf inclination1 binding bHLH1.   DOI:  10.1104/pp.113.234625 ;  PMID:  24443525
• Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.   DOI:  10.1186/1471-2229-13-229 ;  PMID:  24377444
• Helix-loop-helix/basic helix-loop-helix transcription factor network represses cell elongation in Arabidopsis through an apparent incoherent feed-forward loop.   DOI:  10.1073/pnas.1400203111 ;  PMID:  24505057
• Promoter-based integration in plant defense regulation.   DOI:  10.1104/pp.114.248716 ;  PMID:  25352272
• An Arabidopsis gene regulatory network for secondary cell wall synthesis.   DOI:  10.1038/nature14099 ;  PMID:  25533953
• Induction of a dwarf phenotype with IBH1 may enable increased production of plant-made pharmaceuticals in plant factory conditions.   DOI:  10.1111/pbi.12437 ;  PMID:  26190496
• The antagonistic basic helix-loop-helix partners BEE and IBH1 contribute to control plant tolerance to abiotic stress.   DOI:  10.1016/j.plantsci.2018.03.024 ;  PMID:  29650152
• Phospho-Mutant Activity Assays Provide Evidence for the Negative Regulation of Transcriptional Regulator PRE1 by Phosphorylation.   DOI:  10.3390/ijms21239183 ;  PMID:  33276448
• bHLH transcription factors LP1 and LP2 regulate longitudinal cell elongation.   DOI:  10.1093/plphys/kiab387 ;  PMID:  34618066
• Overexpression of HLH4 Inhibits Cell Elongation and Anthocyanin Biosynthesis in Arabidopsis thaliana.   DOI:  10.3390/cells11071087 ;  PMID:  35406652
• The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity.   DOI:  10.1093/molbev/msg088 ;  PMID:  12679534

Sequences: