Information report for AT2G43020
Gene Details
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Functional Descriptions
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0005739 — located in — mitochondrion
- GO:0006598 — acts upstream of or within — polyamine catabolic process
- GO:0046203 — involved in — spermidine catabolic process
- GO:0006598 — involved in — polyamine catabolic process
- GO:0046592 — enables — polyamine oxidase activity
- GO:0046208 — involved in — spermine catabolic process
- GO:0005777 — is active in — peroxisome
Functional Keywords
Literature and News
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- Gene expression analyses of Arabidopsis chromosome 2 using a genomic DNA amplicon microarray. DOI: 10.1101/gr.552003 ; PMID: 12618363
- Functional differentiation of peroxisomes revealed by expression profiles of peroxisomal genes in Arabidopsis thaliana. DOI: 10.1093/pcp/pcg173 ; PMID: 14701923
- Comparative genomics in salt tolerance between Arabidopsis and aRabidopsis-related halophyte salt cress using Arabidopsis microarray. DOI: 10.1104/pp.104.039909 ; PMID: 15247402
- AraPerox. A database of putative Arabidopsis proteins from plant peroxisomes. DOI: 10.1104/pp.104.043695 ; PMID: 15333753
- Heterologous expression and biochemical characterization of a polyamine oxidase from Arabidopsis involved in polyamine back conversion. DOI: 10.1104/pp.106.080911 ; PMID: 16778015
- Identification of novel conserved peptide uORF homology groups in Arabidopsis and rice reveals ancient eukaryotic origin of select groups and preferential association with transcription factor-encoding genes. DOI: 10.1186/1741-7007-5-32 ; PMID: 17663791
- Bridging the gap between plant and mammalian polyamine catabolism: a novel peroxisomal polyamine oxidase responsible for a full back-conversion pathway in Arabidopsis. DOI: 10.1104/pp.108.123802 ; PMID: 18583528
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- A putative peroxisomal polyamine oxidase, AtPAO4, is involved in polyamine catabolism in Arabidopsis thaliana. DOI: 10.1093/pcp/pcn114 ; PMID: 18703589
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Characterization of five polyamine oxidase isoforms in Arabidopsis thaliana. DOI: 10.1007/s00299-010-0881-1 ; PMID: 20532512
- Functional diversity inside the Arabidopsis polyamine oxidase gene family. DOI: 10.1093/jxb/erq341 ; PMID: 21081665
- and organ-specific expression pattern during seedling growth and flower development. DOI: 10.1007/s00726-011-0999-7 ; PMID: 21814784
- BAIUCAS: a novel BLAST-based algorithm for the identification of upstream open reading frames with conserved amino acid sequences and its application to the Arabidopsis thaliana genome. DOI: 10.1093/bioinformatics/bts303 ; PMID: 22618534
- uORF, a regulatory mechanism of the Arabidopsis polyamine oxidase 2. DOI: 10.1007/s11033-014-3098-5 ; PMID: 24435979
- POLYAMINE OXIDASE2 of Arabidopsis contributes to ABA mediated plant developmental processes. DOI: 10.1016/j.plaphy.2015.08.003 ; PMID: 26310141
- Reducing Cytoplasmic Polyamine Oxidase Activity in Arabidopsis Increases Salt and Drought Tolerance by Reducing Reactive Oxygen Species Production and Increasing Defense Gene Expression. DOI: 10.3389/fpls.2016.00214 ; PMID: 26973665
- Arabidopsis Polyamine oxidase-2 uORF is required for downstream translational regulation. DOI: 10.1016/j.plaphy.2016.08.006 ; PMID: 27526386
- Polyamine oxidase 2 is involved in regulating excess spermidine contents during seed germination and early seedling development in Arabidopsis thaliana. DOI: 10.1016/j.bbrc.2019.07.022 ; PMID: 31301766
- Decrease of Arabidopsis PAO activity entails increased RBOH activity, ROS content and altered responses to Pseudomonas. DOI: 10.1016/j.plantsci.2019.110372 ; PMID: 32005378
Gene Resources
- UniProt: A0A5S9X6S4
- EMBL: CACRSJ010000105, CACSHJ010000088
- AlphaFoldDB: A0A5S9X6S4
- EnsemblPlants: AT2G43020.1
- Gramene: AT2G43020.1
- KEGG: ath:AT2G43020
- Orthologous matrix: EFFDNYQ
- ExpressionAtlas: AT2G43020
- InterPro: IPR001613, IPR002937, IPR036188
- PANTHER: PTHR10742, PTHR10742:SF386
- SUPFAM: SSF51905, SSF54373
- Gene3D: 3.50.50.60, 3.90.660.10
- OrthoDB: A0A5S9X6S4
- SWISS-MODEL: A0A5S9X6S4
Homologs
- Beta vulgaris BVRB_4g087230
- Brassica napus BnaA09G0152900ZS, BnaC09G0167200ZS
- Brassica oleracea Bo9g036780
- Brassica rapa Bra027014
- Daucus carota DCAR_009981, DCAR_029206
- Medicago truncatula Medtr6g084700
- Oryza sativa OsPAO3, OsPAO5
- Prunus persica PRUPE_1G356300
Sequences
cDNA Sequence
- >AT2G43020.1
CCAAAGCCTAAAAAATCCGACCTTTTTTTGTTTTCTCTCTCTAGAAGTCTCTCTGTTTTCATCTTTCTCTCTCTCTCTCTAGCTCTTCTTCCTCGTTTCTGGCTTTTCTGGGAATTTTGATCCTTTGGCCCCCATTGCTCGCTTGAATTACGAATCAGATATCGCCGATCGTCGTAGATCTGCGTTGATACTGTCCGGCTGAGTAAACAGGGTGAACAAAAACCAAAAACAGAGAGGGGGTTTAAAAATCCTGAAGAAAATCGCATGAATTTGTTTGGAAGCCTGATTTTTTCATCTTCGATTTCGAGCCACTTCACGACTTGTCTTCTCATCTTTATTCTTCATTTCTCTCCCCAGCTTAATAGTAATAATAATAATAATAATAGTAATCGTAATTCCAATAATCTCGAGAGTAATCGTTTGATCAATTGAAAAAAAAATCATGGAGTCCAGGAAAAACTCTGATCGTCAAATGCGTAGAGCTAATTGCTTTTCAGCTGGTGAGAGGATGAAGACAAGGTCGCCCTCCGTGATTGTGATCGGAGGTGGTTTCGGTGGGATTTCAGCTGCTCGCACTCTTCAGGATGCTTCCTTTCAGGTTATGGTACTGGAGTCCCGTGACAGAATTGGTGGACGAGTTCACACTGATTACTCATTTGGTTTTCCTGTTGATCTTGGTGCATCATGGCTGCATGGAGTATGCAAGGAGAATCCTCTCGCACCAGTTATTGGAAGACTTGGACTGCCCTTGTATCGTACTAGCGGTGACAATTCCGTCCTGTATGATCATGATCTCGAGAGCTATGCTCTGTTTGATATGGATGGCAACCAAGTTCCTCAAGAATTGGTAACTCAGATTGGCGTAACGTTTGAGCGTATTTTGGAAGAGATCAATAAAGTCAGGGATGAGCAGGATGCTGACATTTCAATTTCTCAGGCTTTCTCAATTGTCTTTTCTAGGAAACCCGAGCTGAGGTTAGAGGGGCTTGCACACAACGTACTTCAATGGTATGTATGCCGCATGGAAGGATGGTTTGCCGCAGATGCTGAAACCATCTCTGCAAAGTGTTGGGACCAGGAGGAATTGTTGCCTGGTGGACACGGTCTTATGGTTAGAGGGTATCGTCCTGTCATCAATACTCTGGCGAAAGGTCTTGATATCCGAGTAGGCCACAGGGTTACTAAGATTGTCAGGCGGTACAATGGAGTGAAGGTAACGACAGAAAACGGGCAAACTTTTGTTGCGGATGCTGCAGTCATTGCTGTCCCTCTTGGAGTTTTAAAATCGGGAACCATAAAGTTCGAACCTAAGCTACCTGAGTGGAAACAAGAAGCAATCAACGACCTAGGAGTAGGTATTGAGAACAAGATCATACTACATTTTGAGAAAGTCTTTTGGCCGAAAGTAGAGTTTCTAGGAGTGGTAGCTGAAACCTCCTACGGTTGCAGTTATTTTTTGAACCTGCACAAGGCCACGGGTCATCCGGTTCTGGTTTACATGCCGGCTGGTCAGCTTGCCAAAGACATTGAGAAAATGTCTGATGAAGCAGCTGCAAATTTCGCCGTCTTGCAACTCCAGAGAATTCTTCCCGATGCATTGCCTCCGGTACAGTATCTCGTGTCGAGGTGGGGATCTGATGTGAATTCAATGGGATCTTATAGCTATGATATCGTGGGCAAACCTCATGATCTCTACGAGAGGCTTAGGGTTCCAGTGGATAACTTATTCTTTGCCGGTGAAGCGACGAGCTCGAGCTTCCCGGGCTCGGTTCACGGCGCTTATTCAACTGGATTGATGGCAGCTGAAGATTGTAGGATGCGAGTTCTGGAGCGGTATGGTGAGTTGGATCTGTTCCAGCCTGTGATGGGCGAGGAAGGACCTGCCTCTGTACCTCTTCTTATATCTCGTCTCTAAACTCCATCAGTTATCGTTTACTAGAAGGAACCTCAAGTGATGATTGTCTTAATATGAAACTAAAATTATTCTCGTGTCGGATCGTTTAAAACATTCCCAGTCTTATTTTCTCAGTGTTTTTAATTCAATAAATTGGAACATTATATCCTTGTGATATTATTTATATATGATAATCATCTTTAAGAATTCAAGTAC
CDS Sequence
- >AT2G43020.1
ATGGAGTCCAGGAAAAACTCTGATCGTCAAATGCGTAGAGCTAATTGCTTTTCAGCTGGTGAGAGGATGAAGACAAGGTCGCCCTCCGTGATTGTGATCGGAGGTGGTTTCGGTGGGATTTCAGCTGCTCGCACTCTTCAGGATGCTTCCTTTCAGGTTATGGTACTGGAGTCCCGTGACAGAATTGGTGGACGAGTTCACACTGATTACTCATTTGGTTTTCCTGTTGATCTTGGTGCATCATGGCTGCATGGAGTATGCAAGGAGAATCCTCTCGCACCAGTTATTGGAAGACTTGGACTGCCCTTGTATCGTACTAGCGGTGACAATTCCGTCCTGTATGATCATGATCTCGAGAGCTATGCTCTGTTTGATATGGATGGCAACCAAGTTCCTCAAGAATTGGTAACTCAGATTGGCGTAACGTTTGAGCGTATTTTGGAAGAGATCAATAAAGTCAGGGATGAGCAGGATGCTGACATTTCAATTTCTCAGGCTTTCTCAATTGTCTTTTCTAGGAAACCCGAGCTGAGGTTAGAGGGGCTTGCACACAACGTACTTCAATGGTATGTATGCCGCATGGAAGGATGGTTTGCCGCAGATGCTGAAACCATCTCTGCAAAGTGTTGGGACCAGGAGGAATTGTTGCCTGGTGGACACGGTCTTATGGTTAGAGGGTATCGTCCTGTCATCAATACTCTGGCGAAAGGTCTTGATATCCGAGTAGGCCACAGGGTTACTAAGATTGTCAGGCGGTACAATGGAGTGAAGGTAACGACAGAAAACGGGCAAACTTTTGTTGCGGATGCTGCAGTCATTGCTGTCCCTCTTGGAGTTTTAAAATCGGGAACCATAAAGTTCGAACCTAAGCTACCTGAGTGGAAACAAGAAGCAATCAACGACCTAGGAGTAGGTATTGAGAACAAGATCATACTACATTTTGAGAAAGTCTTTTGGCCGAAAGTAGAGTTTCTAGGAGTGGTAGCTGAAACCTCCTACGGTTGCAGTTATTTTTTGAACCTGCACAAGGCCACGGGTCATCCGGTTCTGGTTTACATGCCGGCTGGTCAGCTTGCCAAAGACATTGAGAAAATGTCTGATGAAGCAGCTGCAAATTTCGCCGTCTTGCAACTCCAGAGAATTCTTCCCGATGCATTGCCTCCGGTACAGTATCTCGTGTCGAGGTGGGGATCTGATGTGAATTCAATGGGATCTTATAGCTATGATATCGTGGGCAAACCTCATGATCTCTACGAGAGGCTTAGGGTTCCAGTGGATAACTTATTCTTTGCCGGTGAAGCGACGAGCTCGAGCTTCCCGGGCTCGGTTCACGGCGCTTATTCAACTGGATTGATGGCAGCTGAAGATTGTAGGATGCGAGTTCTGGAGCGGTATGGTGAGTTGGATCTGTTCCAGCCTGTGATGGGCGAGGAAGGACCTGCCTCTGTACCTCTTCTTATATCTCGTCTCTAA
Protein Sequence
- >AT2G43020.1
MESRKNSDRQMRRANCFSAGERMKTRSPSVIVIGGGFGGISAARTLQDASFQVMVLESRDRIGGRVHTDYSFGFPVDLGASWLHGVCKENPLAPVIGRLGLPLYRTSGDNSVLYDHDLESYALFDMDGNQVPQELVTQIGVTFERILEEINKVRDEQDADISISQAFSIVFSRKPELRLEGLAHNVLQWYVCRMEGWFAADAETISAKCWDQEELLPGGHGLMVRGYRPVINTLAKGLDIRVGHRVTKIVRRYNGVKVTTENGQTFVADAAVIAVPLGVLKSGTIKFEPKLPEWKQEAINDLGVGIENKIILHFEKVFWPKVEFLGVVAETSYGCSYFLNLHKATGHPVLVYMPAGQLAKDIEKMSDEAAANFAVLQLQRILPDALPPVQYLVSRWGSDVNSMGSYSYDIVGKPHDLYERLRVPVDNLFFAGEATSSSFPGSVHGAYSTGLMAAEDCRMRVLERYGELDLFQPVMGEEGPASVPLLISRL