Gene Details:

• Gene ID: AT2G43010
• Gene Symbol: AtPIF4, PIF4, SRL2
• Gene Name: phytochrome interacting factor 4
• Description: phytochrome interacting factor 4;(source:Araport11)
• TAIR Accession: locus:2053733
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT2G43010.1     AT2G43010.2     AT2G43010.5     AT2G43010.4     AT2G43010.3

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)

Gene Ontology:

• GO:0010928  — acts upstream of or within — regulation of auxin mediated signaling pathway
• GO:0005515  — enables — protein binding
• GO:0005634  — located in — nucleus
• GO:0003677  — enables — DNA binding
• GO:0010600  — acts upstream of or within — regulation of auxin biosynthetic process
• GO:0009638  — acts upstream of or within — phototropism
• GO:0009704  — acts upstream of or within — de-etiolation
• GO:1990841  — enables — promoter-specific chromatin binding
• GO:0010017  — acts upstream of or within — red or far-red light signaling pathway
• GO:0010244  — involved in — response to low fluence blue light stimulus by blue low-fluence system
• GO:0005634  — is active in — nucleus
• GO:0003700  — enables — DNA-binding transcription factor activity
• GO:0010161  — acts upstream of or within — red light signaling pathway
• GO:0046983  — enables — protein dimerization activity

Germplasm Phenotype:

• CS2107737  — Exclusive expression in nucleus, constitutive photomorphogenic phenotype in darkness
• CS2109728  — Late flowering under long days at 21 Celsius and under short days at 27 Celsius.
• CS2109729  — Late flowering under long days at 21 Celsius and under short days at 27 Celsius.
• CS2109731  — Early flowering under short days.
• CS2109732  — Early flowering under short days.
• CS66043  — Hypocotyl hypersensitivity to red light.
• CS66046  — Hypocotyl hypersensitivity to red light is greater than the one of either single mutant.
• CS66048  — Seedlings show mild deetiolation phenotype in pseudo-dark conditions, with separated cotyledons.
• CS66049  — Seedlings show severe cop-like deetiolation phenotype in pseudo-dark and true dark conditions, with an unfolded hook and cotyledon separation.
• CS66500  — Seedlings show deetiolation phenotype in pseudo-dark conditions, with an unfolded hook and cotyledon separation.
• CS68095  — Increased photomorphogenic phenotype in darkness compared to pif double mutant combinations.
• CS68096  — Increased photomorphogenic phenotype in darkness compared to pif single mutants, which are generally unaffected.
• CS68811  — Unknown phenotype. *As seen in the other pif mutants, it is likely that this stock has an increased photomorphogenic phenotype in darkness compared to wildtype. However, the increased photomorphogenic phenotype is not confirmed as this mutant was never analyzed in detail by the authors.
• CS69173  — No visible phenotype.
• CS71662  — Short hypocotyl in darkness (D). Hypocotyl does not shorten with increasing amount of R light.
• CS72485  — additional shortening of the hypocotyl in shade conditions compared to pifq (CS66049)
• CS72489  — reduced shade-induced elongation
• CS72490  — reduced shade-induced elongation
• pif4-101/pil6-1  — Reduced hypocotyl elongation, compact rosette. Defects in shade avoidance.
• pifq  — Reduced symptoms of B. cinerea at six days post inoculation.
• srl2  — Hypersensitivity to continuous red light

Function-related keywords:

• shoot axis apex ,  leaf lamina base ,  root ,  shoot system ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  cotyledon ,  petiole ,  hypocotyl ,  leaf apex ,  collective leaf structure ,  pollen

Literature:

• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• PIF4, a phytochrome-interacting bHLH factor, functions as a negative regulator of phytochrome B signaling in Arabidopsis.   DOI:  10.1093/emboj/21.10.2441 ;  PMID:  12006496
• The Arabidopsis COG1 gene encodes a Dof domain transcription factor and negatively regulates phytochrome signaling.   DOI:  10.1046/j.1365-313x.2003.01710.x ;  PMID:  12694592
• The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity.   DOI:  10.1093/molbev/msg088 ;  PMID:  12679534
• A Link between circadian-controlled bHLH factors and the APRR1/TOC1 quintet in Arabidopsis thaliana.   DOI:  10.1093/pcp/pcg078 ;  PMID:  12826627
• HYPERSENSITIVE TO RED AND BLUE 1, a ZZ-type zinc finger protein, regulates phytochrome B-mediated red and cryptochrome-mediated blue light responses.   DOI:  10.1105/tpc.104.029165 ;  PMID:  15705950
• Arabidopsis SHORT HYPOCOTYL UNDER BLUE1 contains SPX and EXS domains and acts in cryptochrome signaling.   DOI:  10.1105/tpc.105.037879 ;  PMID:  16500988
• Phytochrome-mediated inhibition of shade avoidance involves degradation of growth-promoting bHLH transcription factors.   DOI:  10.1111/j.1365-313X.2007.03341.x ;  PMID:  18047474
• The Arabidopsis phytochrome-interacting factor PIF7, together with PIF3 and PIF4, regulates responses to prolonged red light by modulating phyB levels.   DOI:  10.1105/tpc.107.052142 ;  PMID:  18252845
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• The circadian clock regulates the photoperiodic response of hypocotyl elongation through a coincidence mechanism in Arabidopsis thaliana.   DOI:  10.1093/pcp/pcp028 ;  PMID:  19233867
• Rhythmic growth explained by coincidence between internal and external cues.   DOI:  10.1038/nature05946 ;  PMID:  17589502
• HYPERSENSITIVE TO RED AND BLUE 1 and its C-terminal regulatory function control FLOWERING LOCUS T expression.   DOI:  10.1111/j.1365-313X.2007.03295.x ;  PMID:  17916114
• The common function of a novel subfamily of B-Box zinc finger proteins with reference to circadian-associated events in Arabidopsis thaliana.   DOI:  10.1271/bbb.80041 ;  PMID:  18540109
• phytochrome B and PIF4 regulate stomatal development in response to light quantity.   DOI:  10.1016/j.cub.2008.12.046 ;  PMID:  19185498
• Plant development: PIF4 integrates diverse environmental signals.   DOI:  10.1016/j.cub.2009.01.051 ;  PMID:  19321147
• High temperature-mediated adaptations in plant architecture require the bHLH transcription factor PIF4.   DOI:  10.1016/j.cub.2009.01.046 ;  PMID:  19249207
• Phytochromes promote seedling light responses by inhibiting four negatively-acting phytochrome-interacting factors.   DOI:  10.1073/pnas.0812219106 ;  PMID:  19380720
• Over-expression of an AT-hook gene, AHL22, delays flowering and inhibits the elongation of the hypocotyl in Arabidopsis thaliana.   DOI:  10.1007/s11103-009-9507-9 ;  PMID:  19517252
• Hormonal regulation of temperature-induced growth in Arabidopsis.   DOI:  10.1111/j.1365-313X.2009.03983.x ;  PMID:  19686536
• Inhibition of the shade avoidance response by formation of non-DNA binding bHLH heterodimers.   DOI:  10.1038/emboj.2009.306 ;  PMID:  19851283
• REVEILLE1, a Myb-like transcription factor, integrates the circadian clock and auxin pathways.   DOI:  10.1073/pnas.0813035106 ;  PMID:  19805390
• Definition of early transcriptional circuitry involved in light-induced reversal of PIF-imposed repression of photomorphogenesis in young Arabidopsis seedlings.   DOI:  10.1105/tpc.109.070672 ;  PMID:  19920208
• Phytochrome B is involved in mediating red light-induced stomatal opening in Arabidopsis thaliana.   DOI:  10.1093/mp/ssp097 ;  PMID:  19965572
• Transcriptional diversification and functional conservation between DELLA proteins in Arabidopsis.   DOI:  10.1093/molbev/msq012 ;  PMID:  20093430
• Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.   DOI:  10.1016/j.diff.2010.02.003 ;  PMID:  20219281
• Genes underlying quantitative variation in ecologically important traits: PIF4 (phytochrome interacting factor 4) is associated with variation in internode length, flowering time, and fruit set in Arabidopsis thaliana.   DOI:  10.1111/j.1365-294X.2010.04538.x ;  PMID:  20456226
• Arabidopsis PHYTOCHROME INTERACTING FACTOR proteins promote phytochrome B polyubiquitination by COP1 E3 ligase in the nucleus.   DOI:  10.1105/tpc.109.072520 ;  PMID:  20605855
• Multiple phytochrome-interacting bHLH transcription factors repress premature seedling photomorphogenesis in darkness.   DOI:  10.1016/j.cub.2008.10.058 ;  PMID:  19062289
• The GATA-type transcription factors GNC and GNL/CGA1 repress gibberellin signaling downstream from DELLA proteins and PHYTOCHROME-INTERACTING FACTORS.   DOI:  10.1101/gad.594910 ;  PMID:  20844019
• Genomewide characterization of the light-responsive and clock-controlled output pathways in Lotus japonicus with special emphasis of its uniqueness.   DOI:  10.1093/pcp/pcq140 ;  PMID:  20833628
• Phytochrome interacting factors 4 and 5 redundantly limit seedling de-etiolation in continuous far-red light.   DOI:  10.1111/j.1365-313X.2009.03971.x ;  PMID:  19619162
• Unique status of NIA2 in nitrate assimilation: NIA2 expression is promoted by HY5/HYH and inhibited by PIF4.   DOI:  10.4161/psb.4.11.9795 ;  PMID:  20009559
• SPATULA links daytime temperature and plant growth rate.   DOI:  10.1016/j.cub.2010.07.028 ;  PMID:  20705468
• PHYTOCHROME-INTERACTING FACTORS PIF4 and PIF5 are implicated in the regulation of hypocotyl elongation in response to blue light in Arabidopsis thaliana.   DOI:  10.1271/bbb.100586 ;  PMID:  21150090
• Light receptor action is critical for maintaining plant biomass at warm ambient temperatures.   DOI:  10.1111/j.1365-313X.2010.04434.x ;  PMID:  21265897
• Genomic analysis of circadian clock-, light-, and growth-correlated genes reveals PHYTOCHROME-INTERACTING FACTOR5 as a modulator of auxin signaling in Arabidopsis.   DOI:  10.1104/pp.111.172684 ;  PMID:  21430186
• A DELLA in disguise: SPATULA restrains the growth of the developing Arabidopsis seedling.   DOI:  10.1105/tpc.110.082594 ;  PMID:  21478445
• Nitric oxide regulates DELLA content and PIF expression to promote photomorphogenesis in Arabidopsis.   DOI:  10.1104/pp.111.177741 ;  PMID:  21562334
• Phytochromes inhibit hypocotyl negative gravitropism by regulating the development of endodermal amyloplasts through phytochrome-interacting factors.   DOI:  10.1073/pnas.1011066108 ;  PMID:  21220341
• Phytochrome-interacting factor 4 and 5 (PIF4 and PIF5) activate the homeobox ATHB2 and auxin-inducible IAA29 genes in the coincidence mechanism underlying photoperiodic control of plant growth of Arabidopsis thaliana.   DOI:  10.1093/pcp/pcr076 ;  PMID:  21666227
• The ELF4-ELF3-LUX complex links the circadian clock to diurnal control of hypocotyl growth.   DOI:  10.1038/nature10182 ;  PMID:  21753751
• Diurnal dependence of growth responses to shade in Arabidopsis: role of hormone, clock, and light signaling.   DOI:  10.1093/mp/ssr122 ;  PMID:  22311777
• ELF3 recruitment to the PRR9 promoter requires other Evening Complex members in the Arabidopsis circadian clock.   DOI:  10.4161/psb.18766 ;  PMID:  22307044
• Gibberellin metabolism, perception and signaling pathways in Arabidopsis.   DOI:  10.1199/tab.0103 ;  PMID:  22303234
• Phytochrome-interacting factor 4 (PIF4) regulates auxin biosynthesis at high temperature.   DOI:  10.1073/pnas.1110682108 ;  PMID:  22123947
• Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling.   DOI:  10.1111/j.1365-313X.2012.05033.x ;  PMID:  22536829
• Phytochrome signaling in green Arabidopsis seedlings: impact assessment of a mutually negative phyB-PIF feedback loop.   DOI:  10.1093/mp/sss031 ;  PMID:  22492120
• PIF4-mediated activation of YUCCA8 expression integrates temperature into the auxin pathway in regulating arabidopsis hypocotyl growth.   DOI:  10.1371/journal.pgen.1002594 ;  PMID:  22479194
• Shade avoidance.   DOI:  10.1199/tab.0157 ;  PMID:  22582029
• Carbon deprivation-driven transcriptome reprogramming in detached developmentally arresting Arabidopsis inflorescences.   DOI:  10.1104/pp.112.203083 ;  PMID:  22930749
• Photoperiodic regulation of the C-repeat binding factor (CBF) cold acclimation pathway and freezing tolerance in Arabidopsis thaliana.   DOI:  10.1073/pnas.1211295109 ;  PMID:  22927419
• A light-regulated genetic module was recruited to carpel development in Arabidopsis following a structural change to SPATULA.   DOI:  10.1105/tpc.112.097915 ;  PMID:  22851763
• High temperature acclimation through PIF4 signaling.   DOI:  10.1016/j.tplants.2012.09.002 ;  PMID:  23040086
• and PIF4-mediated double coincidence mechanism is implicated in the thermosensitive photoperiodic control of plant architectures in Arabidopsis thaliana.   DOI:  10.1093/pcp/pcs141 ;  PMID:  23037004
• and PIF4-controlled plant growth: a coincidence mechanism directly integrates a hormone signaling network into the photoperiodic control of plant architectures in Arabidopsis thaliana.   DOI:  10.1093/pcp/pcs137 ;  PMID:  23037003
• Circadian clock and PIF4-mediated external coincidence mechanism coordinately integrates both of the cues from seasonal changes in photoperiod and temperature to regulate plant growth in Arabidopsis thaliana.   DOI:  10.4161/psb.22863 ;  PMID:  23154509
• A competitive peptide inhibitor KIDARI negatively regulates HFR1 by forming nonfunctional heterodimers in Arabidopsis photomorphogenesis.   DOI:  10.1007/s10059-013-2159-2 ;  PMID:  23224238
• Soluble carbohydrates regulate auxin biosynthesis via PIF proteins in Arabidopsis.   DOI:  10.1105/tpc.112.104794 ;  PMID:  23209113
• The unique function of the Arabidopsis circadian clock gene PRR5 in the regulation of shade avoidance response.   DOI:  10.4161/psb.23534 ;  PMID:  23333981
• Verification at the protein level of the PIF4-mediated external coincidence model for the temperature-adaptive photoperiodic control of plant growth in Arabidopsis thaliana.   DOI:  10.4161/psb.23390 ;  PMID:  23299336
• Interactions between HLH and bHLH factors modulate light-regulated plant development.   DOI:  10.1093/mp/sss011 ;  PMID:  22331621
• Transcription factor PIF4 controls the thermosensory activation of flowering.   DOI:  10.1038/nature10928 ;  PMID:  22437497
• Interaction between BZR1 and PIF4 integrates brassinosteroid and environmental responses.   DOI:  10.1038/ncb2545 ;  PMID:  22820378
• PIF4 and PIF5 transcription factors link blue light and auxin to regulate the phototropic response in Arabidopsis.   DOI:  10.1105/tpc.113.112417 ;  PMID:  23757399
• Homeodomain-Leucine Zipper II family of transcription factors to the limelight: central regulators of plant development.   DOI:  10.4161/psb.25447 ;  PMID:  23838958
• Heat shock-induced fluctuations in clock and light signaling enhance phytochrome B-mediated Arabidopsis deetiolation.   DOI:  10.1105/tpc.113.114306 ;  PMID:  23933882
• Phytochrome-induced SIG2 expression contributes to photoregulation of phytochrome signalling and photomorphogenesis in Arabidopsis thaliana.   DOI:  10.1093/jxb/ert308 ;  PMID:  24078666
• PIF1 promotes phytochrome-regulated growth under photoperiodic conditions in Arabidopsis together with PIF3, PIF4, and PIF5.   DOI:  10.1093/jxb/ert465 ;  PMID:  24420574
• Transcription of ST2A encoding a sulfotransferase family protein that is involved and PIF4/PIF5-mediated external coincidence mechanism in Arabidopsis thaliana.   DOI:  10.1271/bbb.130559 ;  PMID:  24317064
• Ambient temperature signalling in plants.   DOI:  10.1016/j.pbi.2013.08.004 ;  PMID:  24021869
• The time of day effects of warm temperature on flowering time involve PIF4 and PIF5.   DOI:  10.1093/jxb/ert487 ;  PMID:  24574484
• Helix-loop-helix/basic helix-loop-helix transcription factor network represses cell elongation in Arabidopsis through an apparent incoherent feed-forward loop.   DOI:  10.1073/pnas.1400203111 ;  PMID:  24505057
• Ambient temperature signal feeds into the circadian clock transcriptional circuitry through the EC night-time repressor in Arabidopsis thaliana.   DOI:  10.1093/pcp/pcu030 ;  PMID:  24500967
• Cell elongation is regulated through a central circuit of interacting transcription factors in the Arabidopsis hypocotyl.   DOI:  10.7554/eLife.03031 ;  PMID:  24867218
• UV-B detected by the UVR8 photoreceptor antagonizes auxin signaling and plant shade avoidance.   DOI:  10.1073/pnas.1403052111 ;  PMID:  25071218
• Phytochrome-interacting transcription factors PIF4 and PIF5 induce leaf senescence in Arabidopsis.   DOI:  10.1038/ncomms5636 ;  PMID:  25119965
• Characterization of stress-responsive lncRNAs in Arabidopsis thaliana by integrating expression, epigenetic and structural features.   DOI:  10.1111/tpj.12679 ;  PMID:  25256571
• Age-triggered and dark-induced leaf senescence require the bHLH transcription factors PIF3, 4, and 5.   DOI:  10.1093/mp/ssu109 ;  PMID:  25296857
• Differentially phased leaf growth and movements in Arabidopsis depend on coordinated circadian and light regulation.   DOI:  10.1105/tpc.114.129031 ;  PMID:  25281688
• FCA mediates thermal adaptation of stem growth by attenuating auxin action in Arabidopsis.   DOI:  10.1038/ncomms6473 ;  PMID:  25400039
• Natural diversity in daily rhythms of gene expression contributes to phenotypic variation.   DOI:  10.1073/pnas.1422242112 ;  PMID:  25548158
• The DET1-COP1-HY5 pathway constitutes a multipurpose signaling module regulating plant photomorphogenesis and thermomorphogenesis.   DOI:  10.1016/j.celrep.2014.11.043 ;  PMID:  25533339
• Thermoperiodic control of hypocotyl elongation depends on auxin-induced ethylene signaling that controls downstream PHYTOCHROME INTERACTING FACTOR3 activity.   DOI:  10.1104/pp.114.254425 ;  PMID:  25516603
• Linked circadian outputs control elongation growth and flowering in response to photoperiod and temperature.   DOI:  10.15252/msb.20145766 ;  PMID:  25600997
• ELF3-PIF4 interaction regulates plant growth independently of the Evening Complex.   DOI:  10.1016/j.cub.2014.10.070 ;  PMID:  25557667
• A Novel Arabidopsis microRNA promotes IAA biosynthesis via the indole-3-acetaldoxime pathway by suppressing superroot1.   DOI:  10.1093/pcp/pcu216 ;  PMID:  25552472
• The transcriptional regulator BBX24 impairs DELLA activity to promote shade avoidance in Arabidopsis thaliana.   DOI:  10.1038/ncomms7202 ;  PMID:  25656233
• Gibberellin driven growth in elf3 mutants requires PIF4 and PIF5.   DOI:  10.4161/15592324.2014.992707 ;  PMID:  25738547
• The Transcriptional Regulator BBX19 Promotes Hypocotyl Growth by Facilitating COP1-Mediated EARLY FLOWERING3 Degradation in Arabidopsis.   DOI:  10.1105/tpc.15.00044 ;  PMID:  25841036
• Insight into a Physiological Role for the EC Night-Time Repressor in the Arabidopsis Circadian Clock.   DOI:  10.1093/pcp/pcv094 ;  PMID:  26108788
• Insight into the mechanism of end-of-day far-red light (EODFR)-induced shade avoidance responses in Arabidopsis thaliana.   DOI:  10.1080/09168451.2015.1065171 ;  PMID:  26193333
• Dynamic subnuclear relocalisation of WRKY40 in response to Abscisic acid in Arabidopsis thaliana.   DOI:  10.1038/srep13369 ;  PMID:  26293691
• Natural variants of ELF3 affect thermomorphogenesis by transcriptionally modulating PIF4-dependent auxin response genes.   DOI:  10.1186/s12870-015-0566-6 ;  PMID:  26269119
• Phytochrome-interacting factors PIF4 and PIF5 negatively regulate anthocyanin biosynthesis under red light in Arabidopsis seedlings.   DOI:  10.1016/j.plantsci.2015.06.001 ;  PMID:  26259175
• Gibberellic acid signaling is required for ambient temperature-mediated induction of flowering in Arabidopsis thaliana.   DOI:  10.1111/tpj.13051 ;  PMID:  26466761
• Enhancement of hypocotyl elongation by LOV KELCH PROTEIN2 production is mediated by auxin and phytochrome-interacting factors in Arabidopsis thaliana.   DOI:  10.1007/s00299-015-1896-4 ;  PMID:  26601822
• Arabidopsis LEAFY COTYLEDON1 Mediates Postembryonic Development via Interacting with PHYTOCHROME-INTERACTING FACTOR4.   DOI:  10.1105/tpc.15.00750 ;  PMID:  26566918
• O-GlcNAcylation of master growth repressor DELLA by SECRET AGENT modulates multiple signaling pathways in Arabidopsis.   DOI:  10.1101/gad.270587.115 ;  PMID:  26773002
• PCH1 integrates circadian and light-signaling pathways to control photoperiod-responsive growth in Arabidopsis.   DOI:  10.7554/eLife.13292 ;  PMID:  26839287
• Importance of epidermal clocks for regulation of hypocotyl elongation through PIF4 and IAA29.   DOI:  10.1080/15592324.2016.1143999 ;  PMID:  26829165
• Photoperiodic and thermosensory pathways interact through CONSTANS to promote flowering at high temperature under short days.   DOI:  10.1111/tpj.13183 ;  PMID:  27117775
• Convergence of CONSTITUTIVE PHOTOMORPHOGENESIS 1 and PHYTOCHROME INTERACTING FACTOR signalling during shade avoidance.   DOI:  10.1111/nph.13965 ;  PMID:  27105120
• Cryptochrome 1 interacts with PIF4 to regulate high temperature-mediated hypocotyl elongation in response to blue light.   DOI:  10.1073/pnas.1511437113 ;  PMID:  26699514
• Molecular and genetic control of plant thermomorphogenesis.   DOI:  10.1038/nplants.2015.190 ;  PMID:  27250752
• Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling.   DOI:  10.1038/nplants.2016.13 ;  PMID:  27249348
• DELLA-mediated PIF degradation contributes to coordination of light and gibberellin signalling in Arabidopsis.   DOI:  10.1038/ncomms11868 ;  PMID:  27282989
• PIF4 Integrates Multiple Environmental and Hormonal Signals for Plant Growth Regulation in Arabidopsis.   DOI:  10.14348/molcells.2016.0126 ;  PMID:  27432188
• Genomic Analysis Reveals Contrasting PIFq Contribution to Diurnal Rhythmic Gene Expression in PIF-Induced and -Repressed Genes.   DOI:  10.3389/fpls.2016.00962 ;  PMID:  27458465
• PIF4 and ELF3 Act Independently in Arabidopsis thaliana Thermoresponsive Flowering.   DOI:  10.1371/journal.pone.0161791 ;  PMID:  27564448
• Local Transcriptional Control of YUCCA Regulates Auxin Promoted Root-Growth Inhibition in Response to Aluminium Stress in Arabidopsis.   DOI:  10.1371/journal.pgen.1006360 ;  PMID:  27716807
• BR-dependent phosphorylation modulates PIF4 transcriptional activity and shapes diurnal hypocotyl growth.   DOI:  10.1101/gad.243675.114 ;  PMID:  25085420
• Cryptochromes Interact Directly with PIFs to Control Plant Growth in Limiting Blue Light.   DOI:  10.1016/j.cell.2015.12.018 ;  PMID:  26724867
• Functional roles of Arabidopsis CKRC2/YUCCA8 gene and the involvement of PIF4 in the regulation of auxin biosynthesis by cytokinin.   DOI:  10.1038/srep36866 ;  PMID:  27827441
• HOS1 Facilitates the Phytochrome B-Mediated Inhibition of PIF4 Function during Hypocotyl Growth in Arabidopsis.   DOI:  10.1016/j.molp.2016.11.009 ;  PMID:  27890635
• UV-B Perceived by the UVR8 Photoreceptor Inhibits Plant Thermomorphogenesis.   DOI:  10.1016/j.cub.2016.11.004 ;  PMID:  27989670
• PIF4 Coordinates Thermosensory Growth and Immunity in Arabidopsis.   DOI:  10.1016/j.cub.2016.11.012 ;  PMID:  28041792
• DET1 and HY5 Control PIF4-Mediated Thermosensory Elongation Growth through Distinct Mechanisms.   DOI:  10.1016/j.celrep.2016.12.046 ;  PMID:  28076780
• The REVEILLE Clock Genes Inhibit Growth of Juvenile and Adult Plants by Control of Cell Size.   DOI:  10.1104/pp.17.00109 ;  PMID:  28254761
• The Arabidopsis O-fucosyltransferase SPINDLY activates nuclear growth repressor DELLA.   DOI:  10.1038/nchembio.2320 ;  PMID:  28244988
• PIF4-controlled auxin pathway contributes to hybrid vigor in Arabidopsis thaliana.   DOI:  10.1073/pnas.1703179114 ;  PMID:  28396418
• HOS1 acts as a key modulator of hypocotyl photomorphogenesis.   DOI:  10.1080/15592324.2017.1315497 ;  PMID:  28426369
• PHYTOCHROME INTERACTING FACTORS mediate metabolic control of the circadian system in Arabidopsis.   DOI:  10.1111/nph.14579 ;  PMID:  28440582
• The transcriptional repressor complex FRS7-FRS12 regulates flowering time and growth in Arabidopsis.   DOI:  10.1038/ncomms15235 ;  PMID:  28492275
• The Arabidopsis SWI/SNF protein BAF60 mediates seedling growth control by modulating DNA accessibility.   DOI:  10.1186/s13059-017-1246-7 ;  PMID:  28619072
• Expanding Roles of PIFs in Signal Integration from Multiple Processes.   DOI:  10.1016/j.molp.2017.07.002 ;  PMID:  28711729
• PIF4 Promotes Expression of LNG1 and LNG2 to Induce Thermomorphogenic Growth in Arabidopsis.   DOI:  10.3389/fpls.2017.01320 ;  PMID:  28791042
• BLADE-ON-PETIOLE proteins act in an E3 ubiquitin ligase complex to regulate PHYTOCHROME INTERACTING FACTOR 4 abundance.   DOI:  10.7554/eLife.26759 ;  PMID:  28826468
• Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways.   DOI:  10.1111/tpj.13747 ;  PMID:  29032592
• Brassinosteroids Dominate Hormonal Regulation of Plant Thermomorphogenesis via BZR1.   DOI:  10.1016/j.cub.2017.11.077 ;  PMID:  29337075
• Coordinated regulation of Arabidopsis microRNA biogenesis and red light signaling through Dicer-like 1 and phytochrome-interacting factor 4.   DOI:  10.1371/journal.pgen.1007247 ;  PMID:  29522510
• POWERDRESS-mediated histone deacetylation is essential for thermomorphogenesis in Arabidopsis thaliana.   DOI:  10.1371/journal.pgen.1007280 ;  PMID:  29547672
• Carbon nanoparticles influence photomorphogenesis and flowering time in Arabidopsis thaliana.   DOI:  10.1007/s00299-018-2277-6 ;  PMID:  29541883
• Rewiring of auxin signaling under persistent shade.   DOI:  10.1073/pnas.1721110115 ;  PMID:  29724856
• Coordination of Chloroplast Development through the Action of the GNC and GLK Transcription Factor Families.   DOI:  10.1104/pp.18.00414 ;  PMID:  30002259
• High ambient temperature antagonizes ethylene-induced exaggerated apical hook formation in etiolated Arabidopsis seedlings.   DOI:  10.1111/pce.13417 ;  PMID:  30088270
• Integrated Regulation of Apical Hook Development by Transcriptional Coupling of EIN3/EIL1 and PIFs in Arabidopsis.   DOI:  10.1105/tpc.18.00018 ;  PMID:  30104405
• Dynamic regulation of PIF5 by COP1-SPA complex to optimize photomorphogenesis in Arabidopsis.   DOI:  10.1111/tpj.14074 ;  PMID:  30144338
• Dawn and photoperiod sensing by phytochrome A.   DOI:  10.1073/pnas.1803398115 ;  PMID:  30254157
• A gene-stacking approach to overcome the trade-off between drought stress tolerance and growth in Arabidopsis.   DOI:  10.1111/tpj.14110 ;  PMID:  30285298
• DET1 and COP1 Modulate the Coordination of Growth and Immunity in Response to Key Seasonal Signals in Arabidopsis.   DOI:  10.1016/j.celrep.2018.08.096 ;  PMID:  30282035
• COP1 SUPPRESSOR 4 promotes seedling photomorphogenesis by repressing CCA1 and PIF4 expression in Arabidopsis.   DOI:  10.1073/pnas.1813171115 ;  PMID:  30352855
• Molecular bases for the constitutive photomorphogenic phenotypes in Arabidopsis.   DOI:  10.1242/dev.169870 ;  PMID:  30377170
• PIF4-induced BR synthesis is critical to diurnal and thermomorphogenic growth.   DOI:  10.15252/embj.201899552 ;  PMID:  30389669
• Two B-Box Domain Proteins, BBX18 and BBX23, Interact with ELF3 and Regulate Thermomorphogenesis in Arabidopsis.   DOI:  10.1016/j.celrep.2018.10.060 ;  PMID:  30428343
• A phytochrome-B-mediated regulatory mechanism of phosphorus acquisition.   DOI:  10.1038/s41477-018-0294-7 ;  PMID:  30518831
• PIF-mediated sucrose regulation of the circadian oscillator is light quality and temperature dependent.   DOI:  10.3390/genes9120628 ;  PMID:  30551669
• Daytime temperature is sensed by phytochrome B in Arabidopsis through a transcriptional activator HEMERA.   DOI:  10.1038/s41467-018-08059-z ;  PMID:  30635559
• Deetiolation Enhances Phototropism by Modulating NON-PHOTOTROPIC HYPOCOTYL3 Phosphorylation Status.   DOI:  10.1104/pp.19.00206 ;  PMID:  30918082
• Developmental Programming of Thermonastic Leaf Movement.   DOI:  10.1104/pp.19.00139 ;  PMID:  30948554
• The BAP Module: A Multisignal Integrator Orchestrating Growth.   DOI:  10.1016/j.tplants.2019.04.002 ;  PMID:  31076166
• Developmental polarity shapes thermo-induced nastic movements in plants.   DOI:  10.1080/15592324.2019.1617609 ;  PMID:  31084457
• Photoexcited phytochrome B interacts with brassinazole resistant 1 to repress brassinosteroid signaling in Arabidopsis.   DOI:  10.1111/jipb.12822 ;  PMID:  31081597
• Arabidopsis Transcription Factor TCP5 Controls Plant Thermomorphogenesis by Positively Regulating PIF4 Activity.   DOI:  10.1016/j.isci.2019.04.005 ;  PMID:  31078552
• TCP Transcription Factors Associate with PHYTOCHROME INTERACTING FACTOR 4 and CRYPTOCHROME 1 to Regulate Thermomorphogenesis in Arabidopsis thaliana.   DOI:  10.1016/j.isci.2019.04.002 ;  PMID:  31078553
• Class I TCP Transcription Factors Target the Gibberellin Biosynthesis Gene GA20ox1 and the Growth-Promoting Genes HBI1 and PRE6 during Thermomorphogenic Growth in Arabidopsis.   DOI:  10.1093/pcp/pcz137 ;  PMID:  31292642
• Uncovering the molecular signature underlying the light intensity-dependent root development in Arabidopsis thaliana.   DOI:  10.1186/s12864-019-5933-5 ;  PMID:  31325959
• Trehalose-6-phosphate signaling regulates thermoresponsive hypocotyl growth in Arabidopsis thaliana.   DOI:  10.15252/embr.201947828 ;  PMID:  31393060
• The Nutrient Response Transcriptional Regulome of Arabidopsis.   DOI:  10.1016/j.isci.2019.07.045 ;  PMID:  31415997
• PIF transcription factors link a neighbor threat cue to accelerated reproduction in Arabidopsis.   DOI:  10.1038/s41467-019-11882-7 ;  PMID:  31488833
• Arabidopsis PP6 phosphatases dephosphorylate PIF proteins to repress photomorphogenesis.   DOI:  10.1073/pnas.1907540116 ;  PMID:  31527236
• Degradation of the transcription factors PIF4 and PIF5 under UV-B promotes UVR8-mediated inhibition of hypocotyl growth in Arabidopsis.   DOI:  10.1111/tpj.14556 ;  PMID:  31571300
• PHYTOCHROME INTERACTING FACTOR 7 is important for early responses to elevated temperature in Arabidopsis seedlings.   DOI:  10.1111/nph.16316 ;  PMID:  31705802
• HISTONE DEACETYLASE 9 stimulates auxin-dependent thermomorphogenesis in Arabidopsis thaliana by mediating H2A.Z depletion.   DOI:  10.1073/pnas.1911694116 ;  PMID:  31767749
• The Arabidopsis Transcriptome Responds Specifically and Dynamically to High Light Stress.   DOI:  10.1016/j.celrep.2019.11.051 ;  PMID:  31851942
• GIGANTEA Shapes the Photoperiodic Rhythms of Thermomorphogenic Growth in Arabidopsis.   DOI:  10.1016/j.molp.2020.01.003 ;  PMID:  31954919
• Nuclear-encoded sigma factor 6 (SIG6) is involved in the block of greening response in Arabidopsis thaliana.   DOI:  10.1002/ajb2.1423 ;  PMID:  32002990
• Nuclear pore complex components have temperature-influenced roles in plant growth and immunity.   DOI:  10.1111/pce.13741 ;  PMID:  32022936
• PHYTOCHROME-INTERACTING FACTORS Interact with the ABA Receptors PYL8 and PYL9 to Orchestrate ABA Signaling in Darkness.   DOI:  10.1016/j.molp.2020.02.001 ;  PMID:  32059872
• Coordinated Transcriptional Regulation by the UV-B Photoreceptor and Multiple Transcription Factors for Plant UV-B Responses.   DOI:  10.1016/j.molp.2020.02.015 ;  PMID:  32126287
• Pseudo Response Regulators Regulate Photoperiodic Hypocotyl Growth by Repressing PIF4/5 Transcription.   DOI:  10.1104/pp.19.01599 ;  PMID:  32165445
• IPyA glucosylation mediates light and temperature signaling to regulate auxin-dependent hypocotyl elongation in Arabidopsis.   DOI:  10.1073/pnas.2000172117 ;  PMID:  32152121
• AT-Hook Transcription Factors Restrict Petiole Growth by Antagonizing PIFs.   DOI:  10.1016/j.cub.2020.02.017 ;  PMID:  32197081
• MYCs and PIFs Act Independently in Arabidopsis Growth Regulation.   DOI:  10.1534/g3.120.401188 ;  PMID:  32220954
• Arabidopsis thaliana SURFEIT1-like genes link mitochondrial function to early plant development and hormonal growth responses.   DOI:  10.1111/tpj.14762 ;  PMID:  32248588
• Plant Biology: AHL Transcription Factors Inhibit Growth-Promoting PIFs.   DOI:  10.1016/j.cub.2020.03.035 ;  PMID:  32315635
• Cold-Induced CBF-PIF3 Interaction Enhances Freezing Tolerance by Stabilizing the phyB Thermosensor in Arabidopsis.   DOI:  10.1016/j.molp.2020.04.006 ;  PMID:  32311530
• MYB30 Is a Key Negative Regulator of Arabidopsis Photomorphogenic Development That Promotes PIF4 and PIF5 Protein Accumulation in the Light.   DOI:  10.1105/tpc.19.00645 ;  PMID:  32371543
• Phytochrome-imposed inhibition of PIF7 activity shapes photoperiodic growth in Arabidopsis together with PIF1, 3, 4 and 5.   DOI:  10.1111/ppl.13123 ;  PMID:  32412656
• UVR8-mediated inhibition of shade avoidance involves HFR1 stabilization in Arabidopsis.   DOI:  10.1371/journal.pgen.1008797 ;  PMID:  32392219
• WRKY33-PIF4 loop is required for the regulation of H(2)O(2) homeostasis.   DOI:  10.1016/j.bbrc.2020.05.041 ;  PMID:  32423827
• The cold response regulator CBF1 promotes Arabidopsis hypocotyl growth at ambient temperatures.   DOI:  10.15252/embj.2019103630 ;  PMID:  32449547
• Genetic Interaction Among Phytochrome, Ethylene and Abscisic Acid Signaling During Dark-Induced Senescence in Arabidopsis thaliana.   DOI:  10.3389/fpls.2020.00564 ;  PMID:  32508856
• Low Blue Light Enhances Phototropism by Releasing Cryptochrome1-Mediated Inhibition of PIF4 Expression.   DOI:  10.1104/pp.20.00243 ;  PMID:  32554507
• Regulation of PIF4-mediated thermosensory growth.   DOI:  10.1016/j.plantsci.2020.110541 ;  PMID:  32563452
• The Intrinsically Disordered Protein CARP9 Bridges HYL1 to AGO1 in the Nucleus to Promote MicroRNA Activity.   DOI:  10.1104/pp.20.00258 ;  PMID:  32636339
• High Ambient Temperature Accelerates Leaf Senescence via PHYTOCHROME-INTERACTING FACTOR 4 and 5 in Arabidopsis.   DOI:  10.14348/molcells.2020.0117 ;  PMID:  32732458
• COLD-REGULATED GENE27 Integrates Signals from Light and the Circadian Clock to Promote Hypocotyl Growth in Arabidopsis.   DOI:  10.1105/tpc.20.00192 ;  PMID:  32732313
• COR27 and COR28 Are Novel Regulators of the COP1-HY5 Regulatory Hub and Photomorphogenesis in Arabidopsis.   DOI:  10.1105/tpc.20.00195 ;  PMID:  32769132
• Regulation of COP1 Function by Brassinosteroid Signaling.   DOI:  10.3389/fpls.2020.01151 ;  PMID:  32849709
• The PIFs Redundantly Control Plant Defense Response against Botrytis cinerea in Arabidopsis.   DOI:  10.3390/plants9091246 ;  PMID:  32967288
• SPAs promote thermomorphogenesis by regulating the phyB-PIF4 module in Arabidopsis.   DOI:  10.1242/dev.189233 ;  PMID:  32994167
• Phytochrome A inhibits shade avoidance responses under strong shade through repressing the brassinosteroid pathway in Arabidopsis.   DOI:  10.1111/tpj.15018 ;  PMID:  33037720
• Regulation of ARGONAUTE10 Expression Enables Temporal and Spatial Precision in Axillary Meristem Initiation in Arabidopsis.   DOI:  10.1016/j.devcel.2020.10.019 ;  PMID:  33232670
• BIC1 acts as a transcriptional coactivator to promote brassinosteroid signaling and plant growth.   DOI:  10.15252/embj.2020104615 ;  PMID:  33280146
• and heat-inducible cell elongation via a two-step HLH/bHLH system.   DOI:  10.1093/jxb/eraa567 ;  PMID:  33258952
• ZEITLUPE enhances expression of PIF4 and YUC8 in the upper aerial parts of Arabidopsis seedlings to positively regulate hypocotyl elongation.   DOI:  10.1007/s00299-020-02643-8 ;  PMID:  33386962
• Co-expression Networks From Gene Expression Variability Between Genetically Identical Seedlings Can Reveal Novel Regulatory Relationships.   DOI:  10.3389/fpls.2020.599464 ;  PMID:  33384705
• Cryptochrome 1 Inhibits Shoot Branching by Repressing the Self-Activated Transciption Loop of PIF4 in Arabidopsis.   DOI:  10.1016/j.xplc.2020.100042 ;  PMID:  33367238
• PHYTOCHROME-INTERACTING FACTOR 4 (PIF4) negatively regulates anthocyanin accumulation by inhibiting PAP1 transcription in Arabidopsis seedlings.   DOI:  10.1016/j.plantsci.2020.110788 ;  PMID:  33487363
• EIN3-Mediated Ethylene Signaling Attenuates Auxin Response during Hypocotyl Thermomorphogenesis.   DOI:  10.1093/pcp/pcab028 ;  PMID:  33594435
• GENOMES UNCOUPLED1-independent retrograde signaling targets the ethylene pathway to repress photomorphogenesis.   DOI:  10.1093/plphys/kiaa015 ;  PMID:  33631804
• Semi-In-Vivo Pull-Down Assay for Blue Light-Dependent Protein Interactions.   DOI:  10.1007/978-1-0716-1370-2_17 ;  PMID:  33656680
• Phytochrome B and PHYTOCHROME INTERACTING FACTOR8 modulate seasonal growth in trees.   DOI:  10.1111/nph.17350 ;  PMID:  33735450
• PHYTOCHROME INTERACTING FACTORS PIF4 and PIF5 promote heat stress induced leaf senescence in Arabidopsis.   DOI:  10.1093/jxb/erab158 ;  PMID:  33830198
• RCB initiates Arabidopsis thermomorphogenesis by stabilizing the thermoregulator PIF4 in the daytime.   DOI:  10.1038/s41467-021-22313-x ;  PMID:  33824329
• Functional convergence of growth responses to shade and warmth in Arabidopsis.   DOI:  10.1111/nph.17430 ;  PMID:  33909310
• The E3 ligase XBAT35 mediates thermoresponsive hypocotyl growth by targeting ELF3 for degradation in Arabidopsis.   DOI:  10.1111/jipb.13107 ;  PMID:  33963671
• Two bHLH transcription factors, bHLH48 and bHLH60, associate with phytochrome interacting factor 7 to regulate hypocotyl elongation in Arabidopsis.   DOI:  10.1016/j.celrep.2021.109054 ;  PMID:  33951433
• XBAT31 regulates thermoresponsive hypocotyl growth through mediating degradation of the thermosensor ELF3 in Arabidopsis.   DOI:  10.1126/sciadv.abf4427 ;  PMID:  33962946
• Phytochrome interacting factor proteins regulate cytokinesis in Arabidopsis.   DOI:  10.1016/j.celrep.2021.109095 ;  PMID:  33979615
• An autoregulatory negative feedback loop controls thermomorphogenesis in Arabidopsis.   DOI:  10.1371/journal.pgen.1009595 ;  PMID:  34061850
• Guard cells control hypocotyl elongation through HXK1, HY5, and PIF4.   DOI:  10.1038/s42003-021-02283-y ;  PMID:  34155329
• The INO80 chromatin remodeling complex promotes thermomorphogenesis by connecting H2A.Z eviction and active transcription in Arabidopsis.   DOI:  10.1016/j.molp.2021.07.001 ;  PMID:  34242850
• Exploring PIF4 's contribution to early flowering in plants under daily variable temperature and its tissue-specific flowering gene network.   DOI:  10.1002/pld3.339 ;  PMID:  34355114
• PIL transcription factors directly interact with SPLs and repress tillering/branching in plants.   DOI:  10.1111/nph.17872 ;  PMID:  34800046
• PIF4-PAP1 interaction affects MYB-bHLH-WD40 complex formation and anthocyanin accumulation in Arabidopsis.   DOI:  10.1016/j.jplph.2021.153558 ;  PMID:  34798465
• The PCY-SAG14 phytocyanin module regulated by PIFs and miR408 promotes dark-induced leaf senescence in Arabidopsis.   DOI:  10.1073/pnas.2116623119 ;  PMID:  35022242
• High temperature perception in leaves promotes vascular regeneration and graft formation in distant tissues.   DOI:  10.1242/dev.200079 ;  PMID:  35217857
• Hysteresis in PHYTOCHROME-INTERACTING FACTOR 4 and EARLY-FLOWERING 3 dynamics dominates warm daytime memory in Arabidopsis.   DOI:  10.1093/plcell/koac078 ;  PMID:  35234947
• SWELLMAP 2, a phyB-Interacting Splicing Factor, Negatively Regulates Seedling Photomorphogenesis in Arabidopsis.   DOI:  10.3389/fpls.2022.836519 ;  PMID:  35222493
• Plant AFC2 kinase desensitizes thermomorphogenesis through modulation of alternative splicing.   DOI:  10.1016/j.isci.2022.104051 ;  PMID:  35345463
• High Ambient Temperature Regulated the Plant Systemic Response to the Beneficial Endophytic Fungus Serendipita indica.   DOI:  10.3389/fpls.2022.844572 ;  PMID:  35371134
• SMAX1 potentiates phytochrome B-mediated hypocotyl thermomorphogenesis.   DOI:  10.1093/plcell/koac124 ;  PMID:  35478037
• PEAPOD repressors modulate and coordinate developmental responses to light intensity in Arabidopsis.   DOI:  10.1111/nph.18198 ;  PMID:  35510737
• MEDIATOR SUBUNIT17 integrates jasmonate and auxin signaling pathways to regulate thermomorphogenesis.   DOI:  10.1093/plphys/kiac220 ;  PMID:  35567489
• WRKY2 and WRKY10 regulate the circadian expression of PIF4 during the day through interactions with CCA1/LHY and phyB.   DOI:  10.1016/j.xplc.2021.100265 ;  PMID:  35529947
• The histone H3K27 demethylase REF6/JMJ12 promotes thermomorphogenesis in Arabidopsis.   DOI:  10.1093/nsr/nwab213 ;  PMID:  35591912
• REVEILLE 7 inhibits the expression of the circadian clock gene EARLY FLOWERING 4 to fine-tune hypocotyl growth in response to warm temperatures.   DOI:  10.1111/jipb.13284 ;  PMID:  35603836
• The HDA9-HY5 module epigenetically regulates flowering time in Arabidopsis thaliana.   DOI:  10.1002/jcp.30761 ;  PMID:  35491506
• PIF4 Promotes Expression of HSFA2 to Enhance Basal Thermotolerance in Arabidopsis.   DOI:  10.3390/ijms23116017 ;  PMID:  35682701
• Shade triggers posttranscriptional PHYTOCHROME-INTERACTING FACTOR-dependent increases in H3K4 trimethylation.   DOI:  10.1093/plphys/kiac282 ;  PMID:  35674379
• Phytochrome-Dependent Regulation of ZFP6 and ZFPH Impacts Photomorphogenesis in Arabidopsis thaliana.   DOI:  10.3389/fpls.2022.846262 ;  PMID:  35720591
• EARLY FLOWERING 3 represses the nighttime growth response to sucrose in Arabidopsis.   DOI:  10.1007/s43630-022-00264-6 ;  PMID:  35867260
• and PIF4-mediated signaling.   DOI:  10.1111/jipb.13329 ;  PMID:  35848532
• Organ-specific COP1 control of BES1 stability adjusts plant growth patterns under shade or warmth.   DOI:  10.1016/j.devcel.2022.07.003 ;  PMID:  35901789
• High temperature restricts cell division and leaf size by coordination of PIF4 and TCP4 transcription factors.   DOI:  10.1093/plphys/kiac345 ;  PMID:  35880840
• A Phytochrome B-PIF4-MYC2/MYC4 module inhibits secondary cell wall thickening in response to shaded light.   DOI:  10.1016/j.xplc.2022.100416 ;  PMID:  35927944
• PIF4 enhances DNA binding of CDF2 to co-regulate target gene expression and promote Arabidopsis hypocotyl cell elongation.   DOI:  10.1038/s41477-022-01213-y ;  PMID:  35970973
• PIF7 is a master regulator of thermomorphogenesis in shade.   DOI:  10.1038/s41467-022-32585-6 ;  PMID:  36038577
• PHYTOCHROME-INTERACTING FACTOR 4/HEMERA-mediated thermosensory growth requires the Mediator subunit MED14.   DOI:  10.1093/plphys/kiac412 ;  PMID:  36063057
• POWERDRESS positively regulates systemic acquired resistance in Arabidopsis.   DOI:  10.1007/s00299-022-02926-2 ;  PMID:  36152035
• Activation tagging identifies WRKY14 as a repressor of plant thermomorphogenesis in Arabidopsis.   DOI:  10.1016/j.molp.2022.09.018 ;  PMID:  36155833
• CRISPR/Cas9-mediated AtGATA25 mutant represents a novel model for regulating hypocotyl elongation in Arabidopsis thaliana.   DOI:  10.1007/s11033-022-07926-9 ;  PMID:  36301462
• Brassinosteroids promote etiolated apical structures in darkness by amplifying the ethylene response via the EBF-EIN3/PIF3 circuit.   DOI:  10.1093/plcell/koac316 ;  PMID:  36321994
• Coordinated regulation of the mitochondrial retrograde response by circadian clock regulators and ANAC017.   DOI:  10.1016/j.xplc.2022.100501 ;  PMID:  36463409
• PIN1 regulates epidermal cells development under drought and salt stress using single-cell analysis.   DOI:  10.3389/fpls.2022.1043204 ;  PMID:  36466268
• Shade avoidance in the context of climate change.   DOI:  10.1093/plphys/kiad004 ;  PMID:  36617439
• Guard cell activity of PIF4 and HY5 control transpiration.   DOI:  10.1016/j.plantsci.2022.111583 ;  PMID:  36608874
• ZTL regulates thermomorphogenesis through TOC1 and PRR5.   DOI:  10.1111/pce.14542 ;  PMID:  36655421
• Coordinated histone variant H2A.Z eviction and H3.3 deposition control plant thermomorphogenesis.   DOI:  10.1111/nph.18738 ;  PMID:  36647799
• HSP90s are required for hypocotyl elongation during skotomorphogenesis and thermomorphogenesis via the COP1-ELF3-PIF4 pathway in Arabidopsis.   DOI:  10.1111/nph.18776 ;  PMID:  36707919
• FAR-RED ELONGATED HYPOCOTYL3 increases leaf longevity by delaying senescence in arabidopsis.   DOI:  10.1111/pce.14554 ;  PMID:  36721872
• PHYTOCHROME-INTERACTING FACTORS are involved in starch degradation adjustment via inhibition of the carbon metabolic regulator QUA-QUINE STARCH in Arabidopsis.   DOI:  10.1111/tpj.16124 ;  PMID:  36710626
• Functional Mapping of Genes Modulating Plant Shade Avoidance Using Leaf Traits.   DOI:  10.3390/plants12030608 ;  PMID:  36771692
• PHYTOCHROME INTERACTING FACTOR 4 regulates microtubule organization to mediate high temperature-induced hypocotyl elongation in Arabidopsis.   DOI:  10.1093/plcell/koad042 ;  PMID:  36781395
• A molecular framework underlying low-nitrogen-induced early leaf senescence in Arabidopsis thaliana.   DOI:  10.1016/j.molp.2023.03.006 ;  PMID:  36906802
• MicroRNA156 conditions auxin sensitivity to enable growth plasticity in response to environmental changes in Arabidopsis.   DOI:  10.1038/s41467-023-36774-9 ;  PMID:  36949101
• SALT OVERLY SENSITIVE2 stabilizes phytochrome-interacting factors PIF4 and PIF5 to promote Arabidopsis shade avoidance.   DOI:  10.1093/plcell/koad119 ;  PMID:  37119311
• ELONGATED HYPOCOTYL5 (HY5) and HY5 HOMOLOGUE (HYH) maintain shade avoidance suppression in UV-B.   DOI:  10.1111/tpj.16328 ;  PMID:  37243898
• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity.   DOI:  10.1093/molbev/msg088 ;  PMID:  12679534
• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137

Sequences: