Information report for AT2G42840
Gene Details
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Functional Descriptions
- PO:0009020 — meristem L1 layer — meristema L1 (Spanish, exact), 分裂組織 L1 (Japanese, exact), tunica (related)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- GO:0005634 — located in — nucleus
- GO:0005576 — located in — extracellular region
- GO:0048367 — acts upstream of or within — shoot system development
Functional Keywords
Literature and News
- Cloning and characterization of an L1 layer-specific gene in Arabidopsis thaliana. DOI: 10.1093/oxfordjournals.pcp.a029579 ; PMID: 10483121
- Identification of a cis-regulatory element for L1 layer-specific gene expression, which is targeted by an L1-specific homeodomain protein. DOI: 10.1046/j.1365-313x.2001.01047.x ; PMID: 11439135
- Novel receptor-like kinase ALE2 controls shoot development by specifying epidermis in Arabidopsis. DOI: 10.1242/dev.003533 ; PMID: 17376810
- The role of JAR1 in Jasmonoyl-L: -isoleucine production during Arabidopsis wound response. DOI: 10.1007/s00425-008-0694-4 ; PMID: 18247047
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Characterization of nonhost resistance of Arabidopsis to the Asian soybean rust. DOI: 10.1094/MPMI-21-11-1421 ; PMID: 18842092
- Growth of Arabidopsis seedlings on high fungal doses of Piriformospora indica has little effect on plant performance, stress, and defense gene expression in spite of elevated jasmonic acid and jasmonic acid-isoleucine levels in the roots. DOI: 10.4161/psb.26301 ; PMID: 24047645
- Induction of plant disease resistance upon treatment with yeast cell wall extract. DOI: 10.1080/09168451.2017.1379351 ; PMID: 28950768
- Cell division and turgor mediate enhanced plant growth in Arabidopsis plants treated with the bacterial signalling molecule lumichrome. DOI: 10.1007/s00425-018-2916-8 ; PMID: 29777364
- Trait analysis reveals DOG1 determines initial depth of seed dormancy, but not changes during dormancy cycling that result in seedling emergence timing. DOI: 10.1111/nph.16081 ; PMID: 31359436
- Arabidopsis EGY1 Is Critical for Chloroplast Development in Leaf Epidermal Guard Cells. DOI: 10.3390/plants10061254 ; PMID: 34205501
Gene Resources
- UniProt: A0A178VWJ7
- EMBL: CACRSJ010000105, CACSHJ010000088, LUHQ01000002
- AlphaFoldDB: A0A178VWJ7
- EnsemblPlants: AT2G42840.1
- Gramene: AT2G42840.1
- KEGG: ath:AT2G42840
- Orthologous matrix: PSHGSYN
- ExpressionAtlas: AT2G42840
- InterPro: IPR039923
- PANTHER: PTHR33210, PTHR33210:SF18
- OrthoDB: A0A178VWJ7
Homologs
- Oryza sativa OsGAE1
Sequences
cDNA Sequence
- >AT2G42840.1
CAATCACCAGGGGTATTAAATGGGATAGTGTAAATGCACCTGCAACACATCAACTAACCACACACTCCTCCACCTGTTTGTATTTACTTCAAAAACTTAATTCAAAAATCCCTTTGCTTCTTTCCTTCCCTCTATTTATAAACCCTAGTATCCGGTTTTTATTCTACCACACAATACCATTTGCAACAAACTTCTCTCTGAATCTCAGTGAATTCTCATAAAATGAGAGGGATGGTGAGTTTTGCCGTTTGGGCTCTCTTTGCTGCTTTACTCTCACAGCAGCTCTTTGCTTCTGTTGCTTCCGTAAGGTTTGAGGATGCCAAAACATACTACTTATCTCCTCCCTCTGGCTCACATGGAACTCCTCCATCACACACGCCTCCTTCTTCTAACTGTGGAAGTCCACCTTACGACCCTTCTCCTTCAACTCCTTCTCACCCTTCACCTCCATCACATACTCCAACTCCTTCCACTCCATCACACACTCCAACTCCACACACTCCATCACACACGCCAACTCCACACACCCCTCCTTGTAACTGTGGAAGTCCACCTTCCCACCCTTCCACGCCTTCACACCCTTCCACTCCTTCGCACCCAACGCCATCACACCCTCCTTCTGGTGGATATTACTCATCTCCTCCACCAAGAACTCCGGTTGTTGTGACTCCACCATCACCCATTGTTGATCCAGGCACACCCATCATTGGAGGAAGCCCACCAACTCCTATCATTGACCCAGGCACTCCTGGAACTCCTTTCATTCCTGCTCCTTTCCCACCAATCACTGGAACATGCGATTACTGGAGAAACCACCCTACATTGATATGGGGCTTGCTTGGATGGTGGGGAACTGTTGGAGGAGCTTTTGGTACAGTCAGTATTCCCAGTAGCATTCCAGGGTTTGATCCTCACATGAACCTTCTTCAGGCACTTTCCAACACCCGCTCTGATCCCATTGGTGCTCTCTACCGTGAAGGCACAGCTTCTTGGTTAAACTCCATGGTCAACCATAAGTTCCCTTTCACAACCCCTCAAGTTAGAGACCACTTTGTTGCAGGACTTTCCTCAAACAAGGCAGCCACAAAGCAGGCCCATACCTTCAAGCTTGCTAATGAAGGTCGTCTAAAGCCTAGAGTCTGAAGTTAAGAGAGTTTCATTTCTCAGTTTGTTTGTTGGTTTATATCAAAAACAATCTTAATTAATTATCTTGTCATTTGTGTTGCTCAGTAGAATTTGAAGTGTCCTATAGTCTCTAGTAATATTTATGATGGATACTTCCTTTTATTTAATGTTGTTGTTTCAAAAAATTTCTTGATCTTAAATAAGATTTAGTAGTTCCTCTGTTTCTCAATCACTGTTCAAGAATGTCCAAAGAAATGAATCATATGCAAGTTTA
CDS Sequence
- >AT2G42840.1
ATGAGAGGGATGGTGAGTTTTGCCGTTTGGGCTCTCTTTGCTGCTTTACTCTCACAGCAGCTCTTTGCTTCTGTTGCTTCCGTAAGGTTTGAGGATGCCAAAACATACTACTTATCTCCTCCCTCTGGCTCACATGGAACTCCTCCATCACACACGCCTCCTTCTTCTAACTGTGGAAGTCCACCTTACGACCCTTCTCCTTCAACTCCTTCTCACCCTTCACCTCCATCACATACTCCAACTCCTTCCACTCCATCACACACTCCAACTCCACACACTCCATCACACACGCCAACTCCACACACCCCTCCTTGTAACTGTGGAAGTCCACCTTCCCACCCTTCCACGCCTTCACACCCTTCCACTCCTTCGCACCCAACGCCATCACACCCTCCTTCTGGTGGATATTACTCATCTCCTCCACCAAGAACTCCGGTTGTTGTGACTCCACCATCACCCATTGTTGATCCAGGCACACCCATCATTGGAGGAAGCCCACCAACTCCTATCATTGACCCAGGCACTCCTGGAACTCCTTTCATTCCTGCTCCTTTCCCACCAATCACTGGAACATGCGATTACTGGAGAAACCACCCTACATTGATATGGGGCTTGCTTGGATGGTGGGGAACTGTTGGAGGAGCTTTTGGTACAGTCAGTATTCCCAGTAGCATTCCAGGGTTTGATCCTCACATGAACCTTCTTCAGGCACTTTCCAACACCCGCTCTGATCCCATTGGTGCTCTCTACCGTGAAGGCACAGCTTCTTGGTTAAACTCCATGGTCAACCATAAGTTCCCTTTCACAACCCCTCAAGTTAGAGACCACTTTGTTGCAGGACTTTCCTCAAACAAGGCAGCCACAAAGCAGGCCCATACCTTCAAGCTTGCTAATGAAGGTCGTCTAAAGCCTAGAGTCTGA
Protein Sequence
- >AT2G42840.1
MRGMVSFAVWALFAALLSQQLFASVASVRFEDAKTYYLSPPSGSHGTPPSHTPPSSNCGSPPYDPSPSTPSHPSPPSHTPTPSTPSHTPTPHTPSHTPTPHTPPCNCGSPPSHPSTPSHPSTPSHPTPSHPPSGGYYSSPPPRTPVVVTPPSPIVDPGTPIIGGSPPTPIIDPGTPGTPFIPAPFPPITGTCDYWRNHPTLIWGLLGWWGTVGGAFGTVSIPSSIPGFDPHMNLLQALSNTRSDPIGALYREGTASWLNSMVNHKFPFTTPQVRDHFVAGLSSNKAATKQAHTFKLANEGRLKPRV