AT2G42830

Gene Details

Gene ID: AT2G42830
Gene Symbol: AGL5, SHP2
Gene Name: AGAMOUS-like 5, SHATTERPROOF 2
Description: K-box region and MADS-box transcription factor family protein;(source:Araport11)
TAIR Accession: locus:2052420
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)

GO:0000978 — enables — RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003700 — enables — DNA-binding transcription factor activity
GO:0048481 — acts upstream of or within — plant ovule development
GO:0005515 — enables — protein binding
GO:0048440 — acts upstream of or within — carpel development
GO:0045944 — involved in — positive regulation of transcription by RNA polymerase II
GO:0000981 — enables — DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005634 — located in — nucleus
GO:0000976 — enables — transcription cis-regulatory region binding
GO:0006357 — involved in — regulation of transcription by RNA polymerase II
GO:0046983 — enables — protein dimerization activity

CS3843 — double mutant; produces indehiscent siliques, in which valve margin cells expand at a faster rate after fertilization than valve cells; lignification in valve margin cell is reduced, especially at the fruit base; valve margins are less constricted, resulting in the absence of dehiscence zones in mature siliques.
CS3844 — double mutant; produces indehiscent siliques, in which valve margin cells expand at a faster rate after fertilization than valve cells; lignification in valve margin cell is reduced, especially at the fruit base; valve margins are less constricted, resulting in the absence of dehiscence zones in mature siliques.
CS3845 — siliques from shp2-1 single mutant are dehiscent as wt; double shp1-1 shp2-1 mutant produces indehiscent siliques, in which valve margin cells expand at a faster rate after fertilization than valve cells; lignification in valve margin cell is reduced, especially at the fruit base; valve margins are less constricted, resulting in the absence of dehiscence zones in mature siliques
CS3846 — siliques from shp2-1 single mutant are dehiscent as wt; double shp1-1 shp2-1 mutant produces indehiscent siliques, in which valve margin cells expand at a faster rate after fertilization than valve cells; lignification in valve margin cell is reduced, especially at the fruit base; valve margins are less constricted, resulting in the absence of dehiscence zones in mature siliques

Functional Keywords

Literature and News

Gene Resources

Homologs

Sequences

cDNA Sequence

>AT2G42830.1
AAATGTTAGAAGTAATGGTCCATGTTCTTTCTTTCTTTTTCCTTCTATAACACTTCAGTTTGAAAAAAAACTACCAAACCTTCTGTTTTCTGCAAATGGGTTTTTAAATACTTCCAAAGAAATATTCCTCTAAAAGAAATTATAAACCAAAACAGAAACCAAAAACAAAAAATAAAGTTGAAGCAGCAGTTAAGTGGTACTGAGATAATAAGAATAGTATCTTTAGGCCAATGAACAAATTAACTCTCTCATAATTCATCTTCCCATCCTCACTTCTCTTTCTTTCTGATCATAATTAATCTTGCTAAGCCAGCTAGGGCTTATAGAAATGGAGGGTGGTGCGAGTAATGAAGTAGCAGAGAGCAGCAAGAAGATAGGGAGAGGGAAGATAGAGATAAAGAGGATAGAGAACACTACGAATCGTCAAGTCACTTTCTGCAAACGACGCAATGGTTTACTCAAGAAAGCTTATGAGCTCTCTGTCTTGTGTGACGCTGAGGTTGCTCTTGTCATCTTCTCCACTCGAGGCCGTCTCTACGAGTACGCCAACAACAGTGTGAGAGGAACAATAGAAAGGTACAAGAAAGCTTGCTCCGACGCCGTTAACCCTCCGACCATCACCGAAGCTAATACTCAGTACTATCAGCAAGAGGCGTCTAAACTCCGGAGACAGATTCGGGACATTCAGAATTTGAACAGACACATTCTTGGTGAATCTCTTGGTTCCTTGAACTTTAAGGAACTCAAGAACCTTGAAAGTAGGCTTGAGAAAGGAATCAGTCGTGTCCGATCCAAGAAGCACGAGATGTTAGTTGCAGAGATTGAATACATGCAAAAAAGGGAAATCGAGCTGCAAAACGATAACATGTATCTCCGCTCCAAGATTACTGAAAGAACAGGTCTACAGCAACAAGAATCGAGTGTGATACATCAAGGGACAGTTTACGAGTCGGGTGTTACTTCTTCTCACCAGTCGGGGCAGTATAACCGGAATTATATTGCGGTTAACCTTCTTGAACCGAATCAGAATTCCTCCAACCAAGACCAACCACCTCTGCAACTTGTTTGATTCAGTCTAACATAAGCTTCTTTCCTCAGCCTGAGATCGATCTTATGCATATATATATTCATGTTACACTTACTGTCAAAAAACTTAAAATGCAGATGGTAACGATTTGAGAGGGACCTAATAATTTACATATATCTTGATTATGTAAGTTAAGGCTAAGACAAGAGATCCAAAAATAAAATGGGATTTATTGCTAGTTAGTGTTGC
>AT2G42830.2
AAATGTTAGAAGTAATGGTCCATGTTCTTTCTTTCTTTTTCCTTCTATAACACTTCAGTTTGAAAAAAAACTACCAAACCTTCTGTTTTCTGCAAATGGGTTTTTAAATACTTCCAAAGAAATATTCCTCTAAAAGAAATTATAAACCAAAACAGAAACCAAAAACAAAAAATAAAGTTGAAGCAGCAGTTAAGTGGTACTGAGATAATAAGAATAGTATCTTTAGGCCAATGAACAAATTAACTCTCTCATAATTCATCTTCCCATCCTCACTTCTCTTTCTTTCTGATCATAATTAATCTTGCTAAGCCAGCTAGGGCTTATAGAAATGGAGGGTGGTGCGAGTAATGAAGTAGCAGAGAGCAGCAAGAAGATAGGGAGAGGGAAGATAGAGATAAAGAGGATAGAGAACACTACGAATCGTCAAGTCACTTTCTGCAAACGACGCAATGGTTTACTCAAGAAAGCTTATGAGCTCTCTGTCTTGTGTGACGCTGAGGTTGCTCTTGTCATCTTCTCCACTCGAGGCCGTCTCTACGAGTACGCCAACAACAGTGTGAGAGGAACAATAGAAAGGTACAAGAAAGCTTGCTCCGACGCCGTTAACCCTCCGACCATCACCGAAGCTAATACTCAGTACTATCAGCAAGAGGCGTCTAAACTCCGGAGACAGATTCGGGACATTCAGAATTTGAACAGACACATTCTTGGTGAATCTCTTGGTTCCTTGAACTTTAAGGAACTCAAGAACCTTGAAAGTAGGCTTGAGAAAGGAATCAGTCGTGTCCGATCCAAGAAGCACGAGATGTTAGTTGCAGAGATTGAATACATGCAAAAAAGGGAAATCGAGCTGCAAAACGATAACATGTATCTCCGCTCCAAGATTACTGAAAGAACAGGTCTACAGCAACAAGAATCGAGTGTGATACATCAAGGGACAGTTTACGAGTCGGGTGTTACTTCTTCTCACCAGTCGGGGCAGTATAACCGGAATTATATTGCGGTTAACCTTCTTGAACCGAATCAGAATTCCTCCAACCAAGACCAACCACCTCTGCAACTTGTTTGATTCAGTCTAACATAAGCTTCTTTCCTCAGCCTGAGATCGATCTTATGCATATATATATTCATGTTACACTTACTGTCAAAAAACTTAAAATGCAGATGGTAACGATTTGAGAGGGACCTAATAATTTACATATATCTTGATTATGTAAGTTAAGGCTAAGACAAGAGATCCAAAAATAAAATGGGATTTATTGCTAGTTAGTGTTGC

CDS Sequence

>AT2G42830.1
ATGGAGGGTGGTGCGAGTAATGAAGTAGCAGAGAGCAGCAAGAAGATAGGGAGAGGGAAGATAGAGATAAAGAGGATAGAGAACACTACGAATCGTCAAGTCACTTTCTGCAAACGACGCAATGGTTTACTCAAGAAAGCTTATGAGCTCTCTGTCTTGTGTGACGCTGAGGTTGCTCTTGTCATCTTCTCCACTCGAGGCCGTCTCTACGAGTACGCCAACAACAGTGTGAGAGGAACAATAGAAAGGTACAAGAAAGCTTGCTCCGACGCCGTTAACCCTCCGACCATCACCGAAGCTAATACTCAGTACTATCAGCAAGAGGCGTCTAAACTCCGGAGACAGATTCGGGACATTCAGAATTTGAACAGACACATTCTTGGTGAATCTCTTGGTTCCTTGAACTTTAAGGAACTCAAGAACCTTGAAAGTAGGCTTGAGAAAGGAATCAGTCGTGTCCGATCCAAGAAGCACGAGATGTTAGTTGCAGAGATTGAATACATGCAAAAAAGGGAAATCGAGCTGCAAAACGATAACATGTATCTCCGCTCCAAGATTACTGAAAGAACAGGTCTACAGCAACAAGAATCGAGTGTGATACATCAAGGGACAGTTTACGAGTCGGGTGTTACTTCTTCTCACCAGTCGGGGCAGTATAACCGGAATTATATTGCGGTTAACCTTCTTGAACCGAATCAGAATTCCTCCAACCAAGACCAACCACCTCTGCAACTTGTTTGA
>AT2G42830.2
ATGGAGGGTGGTGCGAGTAATGAAGTAGCAGAGAGCAGCAAGAAGATAGGGAGAGGGAAGATAGAGATAAAGAGGATAGAGAACACTACGAATCGTCAAGTCACTTTCTGCAAACGACGCAATGGTTTACTCAAGAAAGCTTATGAGCTCTCTGTCTTGTGTGACGCTGAGGTTGCTCTTGTCATCTTCTCCACTCGAGGCCGTCTCTACGAGTACGCCAACAACAGTGTGAGAGGAACAATAGAAAGGTACAAGAAAGCTTGCTCCGACGCCGTTAACCCTCCGACCATCACCGAAGCTAATACTCAGTACTATCAGCAAGAGGCGTCTAAACTCCGGAGACAGATTCGGGACATTCAGAATTTGAACAGACACATTCTTGGTGAATCTCTTGGTTCCTTGAACTTTAAGGAACTCAAGAACCTTGAAAGTAGGCTTGAGAAAGGAATCAGTCGTGTCCGATCCAAGAAGCACGAGATGTTAGTTGCAGAGATTGAATACATGCAAAAAAGGGAAATCGAGCTGCAAAACGATAACATGTATCTCCGCTCCAAGATTACTGAAAGAACAGGTCTACAGCAACAAGAATCGAGTGTGATACATCAAGGGACAGTTTACGAGTCGGGTGTTACTTCTTCTCACCAGTCGGGGCAGTATAACCGGAATTATATTGCGGTTAACCTTCTTGAACCGAATCAGAATTCCTCCAACCAAGACCAACCACCTCTGCAACTTGTTTGA

Protein Sequence

>AT2G42830.1
MEGGASNEVAESSKKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITERTGLQQQESSVIHQGTVYESGVTSSHQSGQYNRNYIAVNLLEPNQNSSNQDQPPLQLV
>AT2G42830.2
MEGGASNEVAESSKKIGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITERTGLQQQESSVIHQGTVYESGVTSSHQSGQYNRNYIAVNLLEPNQNSSNQDQPPLQLV