Information report for AT2G42750
Gene Details
|
|
Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0044248 — acts upstream of or within — cellular catabolic process
- GO:0033013 — acts upstream of or within — tetrapyrrole metabolic process
- GO:0006082 — acts upstream of or within — organic acid metabolic process
- GO:0071482 — acts upstream of or within — cellular response to light stimulus
- GO:0005829 — located in — cytosol
- GO:0009507 — located in — chloroplast
- GO:0005506 — enables — iron ion binding
- GO:0009055 — enables — electron transfer activity
- GO:0009637 — acts upstream of or within — response to blue light
- GO:1901565 — acts upstream of or within — organonitrogen compound catabolic process
- GO:0098771 — acts upstream of or within — inorganic ion homeostasis
Functional Keywords
Literature and News
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- Evolution of chloroplast J proteins. DOI: 10.1371/journal.pone.0070384 ; PMID: 23894646
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
Gene Resources
- UniProt: Q9SJI1
- EMBL: AC006931, AY069893, AY085558
- AlphaFoldDB: Q9SJI1
- EnsemblPlants: AT2G42750.1
- Gramene: AT2G42750.1
- KEGG: ath:AT2G42750
- Orthologous matrix: CMFINDI
- ExpressionAtlas: AT2G42750
- InterPro: IPR001080, IPR001623, IPR017896
- PANTHER: PTHR44579, PTHR44579:SF2
- SUPFAM: SSF46565, SSF54862
- PROSITE: PS50076, PS51379
- Gene3D: 1.10.287.110, 3.30.70.20
- OrthoDB: Q9SJI1
- SWISS-MODEL: Q9SJI1
- Conserved Domain Database: cd06257
Homologs
- Brassica napus GSBRNA2T00005957001
- Oryza sativa OsDjA9
Sequences
cDNA Sequence
- >AT2G42750.1
CTCCCTCGTACGCCTTAAATTCTTCACAAAAATAATAAAAATATTAATTCAAATAAATGTTCATCTTCTCCTACGAATGAAATTGAAATTAATTTGAGCGATCGGAACAGGATCGGGTCGGATCTTTTGAAGTTCTTCAATGGCGCAGATACTTTCCCCTGTTTGTACGGATCTTTTGAAGTTCCAGAACTCAGCTCTTAGCTCCAGATCAGGTGCGTCGCCGCGGTTCTCGGCGAAGACCACCGGTGCTTCTTCATCTTGGTACTTACCTCGGTACGCAGGAAAGAGGCGAACCGATTCAATCGGAAGATTGAGAGTTGCAACTGAGGATGCTTCTTCTCTTTCCACCGGTGATGTCGCCGATGATTACTATGCCGTTCTCGGACTCCTTCCAGATGCTACGCAGGAGGAGATTAAGAAAGCTTACTATAACTGTATGAAATCGTGCCATCCAGACTTGAGTGGCAATGACCCCGAAACCACAAATTTCTGCATGTTCATTAACGATATCTATGAGATTCTCAGTGACCCTGTACAGCGTATGGTTTACGATGAAATTCATGGGTATACAGTGACTGCCATCAATCCTTTTCTTGATGACTCCACCCCAAGGGATCATGTTTTTGTTGATGAGTTTGCTTGTATAGGCTGCAAAAATTGTGCCAATGTGGCTCCAGATATATTTCAAATTGAGGAAGACTTTGGTAGAGCAAGGGCTTGTAATCAGCGTGGCAACCCAGATTTGGTTCAGCAAGCAGTTGAAACATGCCCGGTTGATTGTATCCATCAGACTTCTGCTGCACAGTTGTCATTGCTTGAAGATGAAATGCGAAGGGTTGAAAGAGTGAATGTTGCTCTGATGCTTTCTGGAATGGGGTCAGGAGCAGTTGATGTTTTCAGAATGGCGAGATCTCGATGGGAAAAGAGGCAAGCAAAAGTTTTGAATCAAGCTAGAAGTAGAATGATGAAGAGGAAAAACACAGATGAAACACCTTCCTATTGGGATAACCTCTGGGGCAAACAGAATGAATACCAGAAAAGCGAGGAAGAAGTACAAGAACGAGCACAGCGAGCCGCCGCAGCAGCCAGGAGATGGAGGGAATACTCACGAAGAGGCGTGGATAAGCGCCCCACCTTCAAACTCCCAGACTCCGCCTCCAGAGGAGACAACTGAAACCATAGACAGAAATCACTTATAGTTTATATAGGTAAGCAGGTTTCTTACTAGATTATATATCTATATATGTAAATGTCATGTCGCGTTCTAGACCTGTATAGCTTTGTTCTCACATCGATTAAGGAAGAAAAAAACAAGTGTATTTAACGTTTTCGATTTCTGTATTATACTATTTAAAAAAAAAGTTTGCAACGCCTAGATAAAATTAAAATACATTAGTTATGTAATATGCTCGTGATCATTGAGATTGTTCGTGTCAATTATTTCCTTACAAACGATTTCAAGAGCGTATGAATGTGAACATAC
CDS Sequence
- >AT2G42750.1
ATGGCGCAGATACTTTCCCCTGTTTGTACGGATCTTTTGAAGTTCCAGAACTCAGCTCTTAGCTCCAGATCAGGTGCGTCGCCGCGGTTCTCGGCGAAGACCACCGGTGCTTCTTCATCTTGGTACTTACCTCGGTACGCAGGAAAGAGGCGAACCGATTCAATCGGAAGATTGAGAGTTGCAACTGAGGATGCTTCTTCTCTTTCCACCGGTGATGTCGCCGATGATTACTATGCCGTTCTCGGACTCCTTCCAGATGCTACGCAGGAGGAGATTAAGAAAGCTTACTATAACTGTATGAAATCGTGCCATCCAGACTTGAGTGGCAATGACCCCGAAACCACAAATTTCTGCATGTTCATTAACGATATCTATGAGATTCTCAGTGACCCTGTACAGCGTATGGTTTACGATGAAATTCATGGGTATACAGTGACTGCCATCAATCCTTTTCTTGATGACTCCACCCCAAGGGATCATGTTTTTGTTGATGAGTTTGCTTGTATAGGCTGCAAAAATTGTGCCAATGTGGCTCCAGATATATTTCAAATTGAGGAAGACTTTGGTAGAGCAAGGGCTTGTAATCAGCGTGGCAACCCAGATTTGGTTCAGCAAGCAGTTGAAACATGCCCGGTTGATTGTATCCATCAGACTTCTGCTGCACAGTTGTCATTGCTTGAAGATGAAATGCGAAGGGTTGAAAGAGTGAATGTTGCTCTGATGCTTTCTGGAATGGGGTCAGGAGCAGTTGATGTTTTCAGAATGGCGAGATCTCGATGGGAAAAGAGGCAAGCAAAAGTTTTGAATCAAGCTAGAAGTAGAATGATGAAGAGGAAAAACACAGATGAAACACCTTCCTATTGGGATAACCTCTGGGGCAAACAGAATGAATACCAGAAAAGCGAGGAAGAAGTACAAGAACGAGCACAGCGAGCCGCCGCAGCAGCCAGGAGATGGAGGGAATACTCACGAAGAGGCGTGGATAAGCGCCCCACCTTCAAACTCCCAGACTCCGCCTCCAGAGGAGACAACTGA
Protein Sequence
- >AT2G42750.1
MAQILSPVCTDLLKFQNSALSSRSGASPRFSAKTTGASSSWYLPRYAGKRRTDSIGRLRVATEDASSLSTGDVADDYYAVLGLLPDATQEEIKKAYYNCMKSCHPDLSGNDPETTNFCMFINDIYEILSDPVQRMVYDEIHGYTVTAINPFLDDSTPRDHVFVDEFACIGCKNCANVAPDIFQIEEDFGRARACNQRGNPDLVQQAVETCPVDCIHQTSAAQLSLLEDEMRRVERVNVALMLSGMGSGAVDVFRMARSRWEKRQAKVLNQARSRMMKRKNTDETPSYWDNLWGKQNEYQKSEEEVQERAQRAAAAARRWREYSRRGVDKRPTFKLPDSASRGDN