Gene Details:

• Gene ID: AT2G42740
• Gene Symbol: RPL16A, uL5z
• Gene Name: ribosomal protein large subunit 16A, Ribosomal Protein uL5z
• Description: ribosomal protein large subunit 16A;(source:Araport11)
• TAIR Accession: locus:2052432
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT2G42740.1

Plant Ontology Annotations:

• PO:0000282  — trichome — tricoma (Spanish, exact), 毛茸、糸状体、毛 (Japanese, exact), seta (related), setae (related), capilli (narrow), capillus (narrow), cilia (narrow), cilium (narrow), glochid (narrow), glochidia (narrow), glochidium (narrow), hair (narrow), lepides (narrow), lepis (narrow), non-secretory trichome (narrow), scale (narrow), squama (narrow), squamae (narrow), squamella (narrow), squamellae (narrow), squamule (narrow), barb trichome (broad), bristle (broad)
• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0000084  — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)

Gene Ontology:

• GO:0005829  — located in — cytosol
• GO:0005730  — located in — nucleolus
• GO:0022625  — part of — cytosolic large ribosomal subunit
• GO:0006412  — acts upstream of or within — translation
• GO:0003735  — enables — structural constituent of ribosome
• GO:0022625  — located in — cytosolic large ribosomal subunit
• GO:0003729  — enables — mRNA binding
• GO:0005515  — enables — protein binding
• GO:0005773  — located in — vacuole
• GO:0005737  — located in — cytoplasm
• GO:0003723  — enables — RNA binding
• GO:0009506  — located in — plasmodesma

Function-related keywords:

• trichome ,  shoot axis apex ,  leaf lamina base ,  root ,  shoot system ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  cotyledon ,  petiole ,  hypocotyl ,  leaf apex ,  collective leaf structure ,  plant sperm cell

Literature:

• Developmental regulation of ribosomal protein L16 genes in Arabidopsis thaliana.   DOI:  10.1046/j.1365-313x.1995.08010065.x ;  PMID:  7655508
• The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome.   DOI:  6834 ;  PMID:  11598216
• Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana.   DOI:  10.1093/pcp/pch099 ;  PMID:  15215502
• Cell-specific protein profiling in Arabidopsis thaliana trichomes: identification of trichome-located proteins involved in sulfur metabolism and detoxification.   DOI:  10.1016/j.phytochem.2004.03.026 ;  PMID:  15276459
• The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens.   DOI:  10.1094/MPMI-19-0665 ;  PMID:  16776300
• Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification.   DOI:  10.1074/mcp.M700052-MCP200 ;  PMID:  17934214
• A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis.   DOI:  10.1105/tpc.114.129254 ;  PMID:  25387881
• Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method.   DOI:  10.3390/biom10040661 ;  PMID:  32344669
• Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources.   DOI:  10.1111/tpj.15667 ;  PMID:  35000252
• An updated nomenclature for plant ribosomal protein genes.   DOI:  10.1093/plcell/koac333 ;  PMID:  36423343
• Overexpressing Ribosomal Protein L16D Affects Leaf Development but Confers Pathogen Resistance in Arabidopsis.   DOI:  10.3390/ijms24119479 ;  PMID:  37298429
• The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions.   DOI:  10.1016/j.cub.2004.02.039 ;  PMID:  15028209
• Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana.   DOI:  10.1093/pcp/pch099 ;  PMID:  15215502
• Cell-specific protein profiling in Arabidopsis thaliana trichomes: identification of trichome-located proteins involved in sulfur metabolism and detoxification.   DOI:  10.1016/j.phytochem.2004.03.026 ;  PMID:  15276459
• Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions.   DOI:  10.1091/mbc.e04-09-0791 ;  PMID:  15496452
• Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification.   DOI:  10.1074/mcp.M700052-MCP200 ;  PMID:  17934214

Sequences: