Gene Details:
- Gene ID: AT2G42710
- Gene Symbol: uL1m
- Gene Name: Ribosomal Protein uL1m
- Description: Ribosomal protein L1p/L10e family;(source:Araport11)
- TAIR Accession: locus:2041519
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Gene Ontology:
- GO:0034654 — acts upstream of or within — nucleobase-containing compound biosynthetic process
- GO:0009507 — located in — chloroplast
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0003729 — enables — mRNA binding
- GO:0003735 — enables — structural constituent of ribosome
- GO:0006412 — involved in — translation
- GO:0005829 — located in — cytosol
- GO:0015934 — part of — large ribosomal subunit
- GO:0044281 — acts upstream of or within — small molecule metabolic process
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure
Literature:
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- The cold-induced early activation of phospholipase C and D pathways determines the response of two distinct clusters of genes in Arabidopsis cell suspensions. DOI: 10.1104/pp.105.068171 ; PMID: 16258011
- Comparative analysis of bacterial-origin genes for plant mitochondrial ribosomal proteins. DOI: 10.1093/molbev/msj080 ; PMID: 16368778
- A spatial dissection of the Arabidopsis floral transcriptome by MPSS. DOI: 10.1186/1471-2229-8-43 ; PMID: 18426585
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
Sequences:
cDNA Sequence
- >AT2G42710.1
AAAATCACATTTCACACGAAAAACCTCGAGTGAGTGAAGAAACAATGGCAGCTATGAAGCTCCTACTCTCTCAAGCTCGCCGCCAAGGTCTAATCAAACCCTTTTCGTCTCCATTTCAACAAATCCCAAGACTCTTCTCTTCATCTTCATCTTCATCTTCATCTTCATCTTCATCATCCGATTCGAATCCATCTCCCGATTCAAACGAATCTCGCAAAAAGGCTGTTACAATCGAGCCAGTATCGTACGCGGCCAAACCCAAGGATCAGAAATCTGAACCGAAAAATGTTGAATCGACGGAGAACCTTCAGTCTCCAGAATCAGCGAACTGGACTCGTGAAGAAATCCGATATGTGAAAGACTCTCCTTCGATCAATCCGGTTTCTTACGCTCAGCGTGTGGCTCCACTTCCGGAGGATCGTGTCGCCGGTGAGAATGAAGGAGATAGAACTCCAGAGGAGATGGAGAGGGAGAGGAAGAGGATTGAATTAGAGAATCGAGCTAGAAGAAGGTTTTTAAGAGCTAATGCTGTTGAAGAAGATACTTCTTCACTTCCTTTGCCAACTTTGCTTAAACCAGAGTTGAAGCATGGAAAGAAACCTATTTTCGATCTCATGGAGGCCATTAGAGAGATTAAGGGCAATGCCAAGGCGAAATTTGATGAAACTCTTGAGGCGCATGTGAGATTGGGCATTGAAAAAGGAAGATCTGAGCTGATAGTTCGTGGTACTTTGGCTCTACCCCACTCTGTTAAGAAGGATGTGAAAGTGGCTTTCTTTGCCGAGGGAGCTGATGCAGAGGATGCAAAAGCTGCAGGAGCTGATGTCGTTGGTGGTCTTGAGCTTATTGAAGAGATCTTGAAAAGTGGCAAGATTGACTTTGATAGATGTCTTGCAACTCCAAAAATGATGCCCCGTGTTTACAAGATATCAAGAATTCTTAACAATCATGGTTTGATGCCAAACCCCAAACAAGGTAGTGTGACCAAGGATGTTACGAAAGCAGTCAAAGACGCAAAAGCTGGACATACCAAATTTAGAATGGATAAAACGTCTATTCTTCATGTGCCACTTGGAAAGATGAGCTTTTCTGAAGAGGCTTTACGAGAGAATGTTGGTGCGTTTATGAACGCCCTTTTGCTAGCGAAGCCTGCTGGATTGAAAAAGACTTCAAAATATGCTGGTTATGTGAATGCATTCCACTTATGCAGTACGATGGGAAAGGGTTATCCAGTATCGATACAGTCGTTATCCAGAGCAGCGGACCTCCATACCAAATTGCAGCTCAAGTGAGCTAGTGGAGTCCAAAAGATTAATCTTAATCATCCCGTAAAAGTTTTTTTTACTGTTTTCCAAATGCTGAATCTTTGAAAACATTATGATTTGTTGTCTCTTAGGTAGTCTATTGCTCAATTGATCGAATTGGCTTCTGTCCTTTTCTCCTTTGTTTTTGTTGTTTGAGAGCTTATCATCCACTTTCCATAGAGGCCCTTCACTTGAATAAAACATCATAAATTTTTGTCCCCTTGTGTGTTTTTTCCCGTTACAACTAT
CDS Sequence
- >AT2G42710.1
ATGGCAGCTATGAAGCTCCTACTCTCTCAAGCTCGCCGCCAAGGTCTAATCAAACCCTTTTCGTCTCCATTTCAACAAATCCCAAGACTCTTCTCTTCATCTTCATCTTCATCTTCATCTTCATCTTCATCATCCGATTCGAATCCATCTCCCGATTCAAACGAATCTCGCAAAAAGGCTGTTACAATCGAGCCAGTATCGTACGCGGCCAAACCCAAGGATCAGAAATCTGAACCGAAAAATGTTGAATCGACGGAGAACCTTCAGTCTCCAGAATCAGCGAACTGGACTCGTGAAGAAATCCGATATGTGAAAGACTCTCCTTCGATCAATCCGGTTTCTTACGCTCAGCGTGTGGCTCCACTTCCGGAGGATCGTGTCGCCGGTGAGAATGAAGGAGATAGAACTCCAGAGGAGATGGAGAGGGAGAGGAAGAGGATTGAATTAGAGAATCGAGCTAGAAGAAGGTTTTTAAGAGCTAATGCTGTTGAAGAAGATACTTCTTCACTTCCTTTGCCAACTTTGCTTAAACCAGAGTTGAAGCATGGAAAGAAACCTATTTTCGATCTCATGGAGGCCATTAGAGAGATTAAGGGCAATGCCAAGGCGAAATTTGATGAAACTCTTGAGGCGCATGTGAGATTGGGCATTGAAAAAGGAAGATCTGAGCTGATAGTTCGTGGTACTTTGGCTCTACCCCACTCTGTTAAGAAGGATGTGAAAGTGGCTTTCTTTGCCGAGGGAGCTGATGCAGAGGATGCAAAAGCTGCAGGAGCTGATGTCGTTGGTGGTCTTGAGCTTATTGAAGAGATCTTGAAAAGTGGCAAGATTGACTTTGATAGATGTCTTGCAACTCCAAAAATGATGCCCCGTGTTTACAAGATATCAAGAATTCTTAACAATCATGGTTTGATGCCAAACCCCAAACAAGGTAGTGTGACCAAGGATGTTACGAAAGCAGTCAAAGACGCAAAAGCTGGACATACCAAATTTAGAATGGATAAAACGTCTATTCTTCATGTGCCACTTGGAAAGATGAGCTTTTCTGAAGAGGCTTTACGAGAGAATGTTGGTGCGTTTATGAACGCCCTTTTGCTAGCGAAGCCTGCTGGATTGAAAAAGACTTCAAAATATGCTGGTTATGTGAATGCATTCCACTTATGCAGTACGATGGGAAAGGGTTATCCAGTATCGATACAGTCGTTATCCAGAGCAGCGGACCTCCATACCAAATTGCAGCTCAAGTGA
Protein Sequence
- >AT2G42710.1
MAAMKLLLSQARRQGLIKPFSSPFQQIPRLFSSSSSSSSSSSSSSDSNPSPDSNESRKKAVTIEPVSYAAKPKDQKSEPKNVESTENLQSPESANWTREEIRYVKDSPSINPVSYAQRVAPLPEDRVAGENEGDRTPEEMERERKRIELENRARRRFLRANAVEEDTSSLPLPTLLKPELKHGKKPIFDLMEAIREIKGNAKAKFDETLEAHVRLGIEKGRSELIVRGTLALPHSVKKDVKVAFFAEGADAEDAKAAGADVVGGLELIEEILKSGKIDFDRCLATPKMMPRVYKISRILNNHGLMPNPKQGSVTKDVTKAVKDAKAGHTKFRMDKTSILHVPLGKMSFSEEALRENVGAFMNALLLAKPAGLKKTSKYAGYVNAFHLCSTMGKGYPVSIQSLSRAADLHTKLQLK