Information report for AT2G42690
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0071493 — involved in — cellular response to UV-B
- GO:0005829 — located in — cytosol
- GO:0008970 — enables — phospholipase A1 activity
- GO:0005737 — located in — cytoplasm
- GO:0009650 — involved in — UV protection
- GO:0005634 — located in — nucleus
Functional Keywords
Literature and News
- Large-scale identification of leaf senescence-associated genes. DOI: 10.1046/j.1365-313x.2003.01908.x ; PMID: 14617064
- Resources for targeted insertional and deletional mutagenesis in Arabidopsis. DOI: 10.1023/B:PLAN.0000009271.08420.d9 ; PMID: 14756312
- Phospholipid-derived signaling mediated by phospholipase A in plants. DOI: 10.1016/j.tplants.2004.03.004 ; PMID: 15130548
- Characterization of an ultraviolet B-induced lipase in Arabidopsis. DOI: 10.1104/pp.103.036376 ; PMID: 15181214
- Bestatin, an inhibitor of aminopeptidases, provides a chemical genetics approach to dissect jasmonate signaling in Arabidopsis. DOI: 10.1104/pp.106.080390 ; PMID: 16798948
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Head-Group Acylation of Chloroplast Membrane Lipids. DOI: 10.3390/molecules26051273 ; PMID: 33652855
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178VY00
- EMBL: CACRSJ010000105, CACSHJ010000088, LUHQ01000002
- AlphaFoldDB: A0A178VY00
- EnsemblPlants: AT2G42690.1
- Gramene: AT2G42690.1
- KEGG: ath:AT2G42690
- Orthologous matrix: LLGCKNW
- ExpressionAtlas: AT2G42690
- InterPro: IPR002921, IPR029058, IPR033556
- PANTHER: PTHR31828, PTHR31828:SF10
- SUPFAM: SSF53474
- Gene3D: 3.40.50.1820
- OrthoDB: A0A178VY00
- SWISS-MODEL: A0A178VY00
- Conserved Domain Database: cd00519
Homologs
- Capsicum annuum T459_27058
- Gossypium barbadense Gobar.A05G163300, Gobar.D05G163800
- Gossypium hirsutum Gohir.A05G156100, Gohir.D05G158900
- Nicotiana attenuata A4A49_15555, A4A49_30803, A4A49_06523, A4A49_19230
- Ricinus communis 29900.t000058, 29900.t000059
- Solanum lycopersicum Solyc02g077160.3
Sequences
cDNA Sequence
- >AT2G42690.1
ACTTATTATCTCCTTACACACACCATTTCTCTCTAATGGCTACAACAACCACATCATGGGAAGAACTCTTAGGCTCAAAGAATTGGGACACTATCTTAGACCCATTAGACCAATCACTTAGGGAACTCATCTTACGTTGTGGCGACTTTTGTCAAGCCACCTACGATGCCTTCGTCAACGACCAAAACTCCAAGTACTGTGGAGCCAGCCGCTACGGCAAATCTTCTTTCTTCGACAAGGTCATGCTCGAAAACGCTTCCGACTACGAGGTTGTAAACTTCCTCTACGCCACAGCTCGTGTTTCTCTCCCCGAAGGTTTGCTTCTCCAATCACAATCAAGAGATTCTTGGGACCGTGAGTCTAACTGGTTTGGCTACATTGCTGTCACGTCTGATGAACGGTCTAAGGCTTTAGGACGCCGTGAGATCTATATAGCTTTGAGAGGAACGAGCAGGAACTATGAGTGGGTCAATGTTTTGGGTGCTAGGCCAACTTCAGCTGACCCCTTGCTGCACGGACCCGAGCAGGATGGTTCTGGTGGTGTAGTTGAAGGTACGACTTTTGATAGTGACAGTGAAGATGAAGAAGGGTGTAAGGTGATGCTCGGGTGGCTCACAATCTATACTTCTAATCACCCCGAATCGAAATTCACTAAGCTGAGTCTACGGTCACAGTTGTTAGCCAAGATCAAGGAGCTTCTGTTGAAGTATAAGGACGAGAAACCGAGCATTGTGTTGACTGGACATAGCTTGGGAGCTACAGAGGCTGTTCTGGCCGCCTATGATATAGCTGAGAACGGTTCCAGTGATGATGTTCCGGTCACTGCTATAGTCTTTGGTTGTCCACAGGTAGGAAACAAGGAGTTCAGAGACGAAGTAATGAGTCACAAGAACTTAAAGATCCTCCATGTAAGGAACACGATTGATCTCTTAACTCGATACCCAGGGGGACTTTTAGGGTATGTGGACATAGGAATAAACTTTGTGATCGATACAAAGAAGTCACCGTTCCTAAGCGATTCAAGGAATCCAGGGGATTGGCATAATCTTCAGGCGATGTTACATGTTGTAGCTGGATGGAATGGGAAGAAAGGAGAGTTTAAACTGATGGTTAAGAGAAGTATTGCATTAGTGAACAAGTCATGCGAGTTCTTGAAAGCTGAGTGTTTGGTGCCAGGATCTTGGTGGGTAGAGAAGAACAAAGGACTGATCAAGAACGAAGATGGTGAATGGGTTCTTGCTCCCGTTGAAGAAGAACCTGTACCTGAATTCTAAATTGTATTTCTGTATTTTTCTCTAAGGTCATGATAAATCAACAATAAGCAGTTCAACTATGTGATGAAAAGACCCAAGTTATTATATTGATATGAGTTTATGAGATAGAGATTCC
CDS Sequence
- >AT2G42690.1
ATGGCTACAACAACCACATCATGGGAAGAACTCTTAGGCTCAAAGAATTGGGACACTATCTTAGACCCATTAGACCAATCACTTAGGGAACTCATCTTACGTTGTGGCGACTTTTGTCAAGCCACCTACGATGCCTTCGTCAACGACCAAAACTCCAAGTACTGTGGAGCCAGCCGCTACGGCAAATCTTCTTTCTTCGACAAGGTCATGCTCGAAAACGCTTCCGACTACGAGGTTGTAAACTTCCTCTACGCCACAGCTCGTGTTTCTCTCCCCGAAGGTTTGCTTCTCCAATCACAATCAAGAGATTCTTGGGACCGTGAGTCTAACTGGTTTGGCTACATTGCTGTCACGTCTGATGAACGGTCTAAGGCTTTAGGACGCCGTGAGATCTATATAGCTTTGAGAGGAACGAGCAGGAACTATGAGTGGGTCAATGTTTTGGGTGCTAGGCCAACTTCAGCTGACCCCTTGCTGCACGGACCCGAGCAGGATGGTTCTGGTGGTGTAGTTGAAGGTACGACTTTTGATAGTGACAGTGAAGATGAAGAAGGGTGTAAGGTGATGCTCGGGTGGCTCACAATCTATACTTCTAATCACCCCGAATCGAAATTCACTAAGCTGAGTCTACGGTCACAGTTGTTAGCCAAGATCAAGGAGCTTCTGTTGAAGTATAAGGACGAGAAACCGAGCATTGTGTTGACTGGACATAGCTTGGGAGCTACAGAGGCTGTTCTGGCCGCCTATGATATAGCTGAGAACGGTTCCAGTGATGATGTTCCGGTCACTGCTATAGTCTTTGGTTGTCCACAGGTAGGAAACAAGGAGTTCAGAGACGAAGTAATGAGTCACAAGAACTTAAAGATCCTCCATGTAAGGAACACGATTGATCTCTTAACTCGATACCCAGGGGGACTTTTAGGGTATGTGGACATAGGAATAAACTTTGTGATCGATACAAAGAAGTCACCGTTCCTAAGCGATTCAAGGAATCCAGGGGATTGGCATAATCTTCAGGCGATGTTACATGTTGTAGCTGGATGGAATGGGAAGAAAGGAGAGTTTAAACTGATGGTTAAGAGAAGTATTGCATTAGTGAACAAGTCATGCGAGTTCTTGAAAGCTGAGTGTTTGGTGCCAGGATCTTGGTGGGTAGAGAAGAACAAAGGACTGATCAAGAACGAAGATGGTGAATGGGTTCTTGCTCCCGTTGAAGAAGAACCTGTACCTGAATTCTAA
Protein Sequence
- >AT2G42690.1
MATTTTSWEELLGSKNWDTILDPLDQSLRELILRCGDFCQATYDAFVNDQNSKYCGASRYGKSSFFDKVMLENASDYEVVNFLYATARVSLPEGLLLQSQSRDSWDRESNWFGYIAVTSDERSKALGRREIYIALRGTSRNYEWVNVLGARPTSADPLLHGPEQDGSGGVVEGTTFDSDSEDEEGCKVMLGWLTIYTSNHPESKFTKLSLRSQLLAKIKELLLKYKDEKPSIVLTGHSLGATEAVLAAYDIAENGSSDDVPVTAIVFGCPQVGNKEFRDEVMSHKNLKILHVRNTIDLLTRYPGGLLGYVDIGINFVIDTKKSPFLSDSRNPGDWHNLQAMLHVVAGWNGKKGEFKLMVKRSIALVNKSCEFLKAECLVPGSWWVEKNKGLIKNEDGEWVLAPVEEEPVPEF