Information report for AT2G42680
Gene Details
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Functional Descriptions
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- GO:0045893 — acts upstream of or within — positive regulation of DNA-templated transcription
- GO:0005829 — located in — cytosol
- GO:0005730 — located in — nucleolus
- GO:0003713 — enables — transcription coactivator activity
- GO:0003729 — enables — mRNA binding
- GO:0005634 — located in — nucleus
- GO:0005634 — is active in — nucleus
Functional Keywords
- flower , shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , plant sperm cell , pollen tube cell , pollen
Literature and News
- a high-density colony array study (HDCA). DOI: 10.1046/j.1365-313x.2003.01847.x ; PMID: 12969430
- Three Arabidopsis MBF1 homologs with distinct expression profiles play roles as transcriptional co-activators. DOI: 10.1093/pcp/pch017 ; PMID: 14988493
- Structure and expression analysis of three subtypes of Arabidopsis MBF1 genes. DOI: 10.1016/j.bbaexp.2004.08.004 ; PMID: 15451167
- Enhanced tolerance to environmental stress in transgenic plants expressing the transcriptional coactivator multiprotein bridging factor 1c. DOI: 10.1104/pp.105.070110 ; PMID: 16244138
- Transcriptional coactivator MBF1s from Arabidopsis predominantly localize in nucleolus. DOI: 10.1007/s10265-005-0238-y ; PMID: 16283071
- The transcriptional co-activator MBF1c is a key regulator of thermotolerance in Arabidopsis thaliana. DOI: 10.1074/jbc.M709187200 ; PMID: 18201973
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Arabidopsis MBF1s control leaf cell cycle and its expansion. DOI: 10.1093/pcp/pcn187 ; PMID: 19050034
- The analysis of an Arabidopsis triple knock-down mutant reveals functions for MBF1 genes under oxidative stress conditions. DOI: 10.1016/j.jplph.2009.09.003 ; PMID: 19783066
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Three Arabidopsis MBF1 homologs with distinct expression profiles play roles as transcriptional co-activators. DOI: 10.1093/pcp/pch017 ; PMID: 14988493
- Transcriptional coactivator MBF1s from Arabidopsis predominantly localize in nucleolus. DOI: 10.1007/s10265-005-0238-y ; PMID: 16283071
- Abiotic and biotic stress tolerance in Arabidopsis overexpressing the multiprotein bridging factor 1a (MBF1a) transcriptional coactivator gene. DOI: 10.1016/j.bbrc.2006.12.212 ; PMID: 17234157
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178VSD5
- EMBL: CACRSJ010000105, CACSHJ010000088, LR881467
- AlphaFoldDB: A0A178VSD5
- EnsemblPlants: AT2G42680.1
- Gramene: AT2G42680.1
- KEGG: ath:AT2G42680
- Orthologous matrix: GKNKSCK
- ExpressionAtlas: AT2G42680
- InterPro: IPR001387, IPR010982, IPR013729
- PANTHER: PTHR10245, PTHR10245:SF114
- SUPFAM: SSF47413
- PROSITE: PS50943
- Gene3D: 1.10.260.40
- OrthoDB: A0A178VSD5
- SWISS-MODEL: A0A178VSD5
- Conserved Domain Database: cd00093
Homologs
- Brassica napus GSBRNA2T00155691001
- Brassica oleracea Bo8g092810
- Malus domestica MDP0000537221
- Triticum aestivum TaMBF1c-7A, TaMBF1c-7B, TaMBF1c-7D
Sequences
cDNA Sequence
- >AT2G42680.1
AAAAAAAGTAGCGTGAAGCTCACGCACGGCTTTTGCTATTTTATTCCCAGTTTTCTCTCATATTCTTTTCTAACTTGTCACCTGCAGAGAAAGAAAGAAGCCCTAGATTTTGTCAAAAGGCGGTTGCAGAACAAAAAACCATGGCCGGAATTGGACCGATAACTCAGGATTGGGAGCCGGTGGTGATCCGTAAGAAACCCGCTAACGCCGCTGCCAAGCGCGACGAGAAAACTGTCAACGCCGCTCGTCGATCCGGCGCCGATATCGAGACCGTCAGAAAATTCAATGCTGGAACCAACAAGGCGGCATCAAGCGGCACATCTCTGAACACAAAAATGCTTGATGATGACACTGAGAACCTTACTCATGAACGTGTGCCTACTGAGCTAAAGAAAGCCATTATGCAAGCCAGGACAGACAAGAAGCTAACCCAGTCCCAACTTGCTCAAATCATCAATGAGAAGCCACAAGTGATTCAAGAGTATGAGTCTGGCAAAGCTATACCCAACCAGCAAATCCTTTCTAAGCTGGAGAGAGCGCTTGGAGCTAAGCTTCGTGGAAAGAAGTGAGCCAAGTTCTACTGATGTAGCAAGTAACAAGAATCAATGCTTTCGTCTAATGCCGTAACTTTGCCAAGAAGAATATTTTCTGATTGTAAGAAAGCAAAACCGTTTGAATGTTTGTTTCGTTGATGGAATCTCTATCTCATAAACTCATATCAATATAATAACTTGGGTCTTTTCATCACATAGTTGAACTGCTTATTGTTGATT
CDS Sequence
- >AT2G42680.1
ATGGCCGGAATTGGACCGATAACTCAGGATTGGGAGCCGGTGGTGATCCGTAAGAAACCCGCTAACGCCGCTGCCAAGCGCGACGAGAAAACTGTCAACGCCGCTCGTCGATCCGGCGCCGATATCGAGACCGTCAGAAAATTCAATGCTGGAACCAACAAGGCGGCATCAAGCGGCACATCTCTGAACACAAAAATGCTTGATGATGACACTGAGAACCTTACTCATGAACGTGTGCCTACTGAGCTAAAGAAAGCCATTATGCAAGCCAGGACAGACAAGAAGCTAACCCAGTCCCAACTTGCTCAAATCATCAATGAGAAGCCACAAGTGATTCAAGAGTATGAGTCTGGCAAAGCTATACCCAACCAGCAAATCCTTTCTAAGCTGGAGAGAGCGCTTGGAGCTAAGCTTCGTGGAAAGAAGTGA
Protein Sequence
- >AT2G42680.1
MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGTSLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKAIPNQQILSKLERALGAKLRGKK