Gene Details:
- Gene ID: AT2G42570
- Gene Symbol: TBL39
- Gene Name: TRICHOME BIREFRINGENCE-LIKE 39
- Description: TRICHOME BIREFRINGENCE-LIKE 39;(source:Araport11)
- TAIR Accession: locus:2041574
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0005794 — is active in — Golgi apparatus
- GO:0007049 — acts upstream of or within — cell cycle
- GO:0048507 — acts upstream of or within — meristem development
- GO:0009506 — located in — plasmodesma
- GO:0016413 — enables — O-acetyltransferase activity
- GO:0048869 — acts upstream of or within — cellular developmental process
- GO:0048367 — acts upstream of or within — shoot system development
- GO:0022607 — acts upstream of or within — cellular component assembly
- GO:0005773 — located in — vacuole
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- The FHY3 and FAR1 genes encode transposase-related proteins involved in regulation of gene expression by the phytochrome A-signaling pathway. DOI: 10.1046/j.1365-313x.2003.01741.x ; PMID: 12753585
- Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. DOI: 10.1002/pmic.200300607 ; PMID: 14760709
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- Comparison of gene expression in segregating families identifies genes and genomic regions involved in a novel adaptation, zinc hyperaccumulation. DOI: 10.1111/j.1365-294X.2006.02981.x ; PMID: 16911220
- Arabidopsis ESK1 encodes a novel regulator of freezing tolerance. DOI: 10.1111/j.1365-313X.2006.02994.x ; PMID: 17316173
- TRICHOME BIREFRINGENCE and its homolog AT5G01360 encode plant-specific DUF231 proteins required for cellulose biosynthesis in Arabidopsis. DOI: 10.1104/pp.110.153320 ; PMID: 20388664
- Involvement of TBL/DUF231 proteins into cell wall biology. DOI: 10.4161/psb.5.8.12414 ; PMID: 20657172
- Molecular Mechanism of Polysaccharide Acetylation by the Arabidopsis Xylan O-acetyltransferase XOAT1. DOI: 10.1105/tpc.20.00028 ; PMID: 32354790
- Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. DOI: 10.1002/pmic.200300607 ; PMID: 14760709
Sequences:
cDNA Sequence
- >AT2G42570.1
ACGATGATTTATTATTGATAACACGAAATTAACCAATAAACATTGTTGGTTTTTCAAAGTCTTGGTTTCAGCTTATTTGAACCAAGCTAACTAAAAACAGTGTTGCAAATTTCAACATTTTCTTACTGTTGAGATAATTTAAAGAAACGAAAAGAACTACTAATTTACTACAGTAAAAAATTCTAAAACAAGAGAAGTAAAATATTGGAAGGTACCTAGTACCAAATTAACTAATATAAATCGAATAAAGACATATAAAGGATCTTGTTTCTTGTTTCCCCCTTCCCATGTGATGTGAACAATCTCACTCTCTTTCTCTATCTCTCTTTCGAGTTTCTTTGGAGTATTATATAACAAATCAGTCCAAGACACCTCTTTTCTCACACCAATCTCGCTCTCACCACAAAACAGAGAATCTCAGATCGAAGAAGCAAAGAAAGAGAGAATGGGTTTCACTTCCCGAGGAAACCCTTCTTTTCTCTTCTTCTTCTTCTTCTTCCTCTGTCTCTCCACAGTCTCTGCTTACATCAACAGCACAAGCAGCAATAATGATGAAGTAAGAAGAGAGCTAGCTTCTGGGAGATGTAATTGGTTTAGAGGGAATTGGGTTTATGATGTAAAGTACCCACTTTATGATCCTTATAAATGTCCATTCATAGATCCACAGTTTAACTGTAAGAAGTATGGTCGTCCTGACAATGCTTACCTTAAGTATCGATGGCAACCATCTTCTTGCTCTCTCCCCAGATTCAATGGGTTGTATTTCTTGAGGAGGATGAGAGGGAAGAAGATAATGTTCGTTGGAGATTCACTAAGCACAAACATGTGGCAATCTCTTGCTTGTCTAATTCACTCTTGGGTTCCTAACACTCGTTACACTCTTATTCGCCAAAAGGGTCTTGCTTCACTTACCTTTGAGGAATACGGAGTGACGTTGTTGCTATACAGAACACAGTTCTTGGTAGATTTGAATGTGGAGAAAGTTGGGAGAGTGCTTAAGCTTGATTCCATTAAGCAAGGGAATATGTGGAGAGGCATGGACGTTTTGATTTTCAACTCGTGGCATTGGTGGACACACACCGAACACATTCAGCCGTGGGATTACATGGAAGATGGGAATAGGTTGTACAAAGACATGAACCGGCTCGTTGCTTTCTACAAAGGAATGACCACTTGGGCTCGATGGGTTAATGCTTACGTCGATCCTTCTAAGACTAAAGTCTTCTTCAACGGCGTGTCTCCTACTCATTACGAGGGAAAGGATTGGGGAGAGCCAATGAACTCATGTAGGAGTCAAACGCAGCCATTTTACGGAAGGAAGTATCCAGGAGGGACACCAATGGCTTGGGTGATTCTAAACAAAGTGATGAGGAGATTGAAGAAACCGGTCCATTGGCTCGATATAACCGGTCTGTCTCAGCTTCGTAAAGATGCTCATCCTTCTGCTTTCAGTGGGAACCATCCTGGTAATGACTGTAGCCATTGGTGTCTCCCTGGTTTGCCTGATACTTGGAACTTGCTCTTTTACTCTACTCTTTTCTCTTCTTAATTAATTCCTTTCTCATCAATGTATAAGTTAACTTAAAACAACAATCAATTATTTTTAGTTATCTTTCACTATGGTTGTTTGTTTCTTGACTGAAACAACTCTTAAATAAGACCAACGCACTTGACTCTGTGAAATGAGAAAACATGTCAAGAAAAGATTATACAAC
CDS Sequence
- >AT2G42570.1
ATGGGTTTCACTTCCCGAGGAAACCCTTCTTTTCTCTTCTTCTTCTTCTTCTTCCTCTGTCTCTCCACAGTCTCTGCTTACATCAACAGCACAAGCAGCAATAATGATGAAGTAAGAAGAGAGCTAGCTTCTGGGAGATGTAATTGGTTTAGAGGGAATTGGGTTTATGATGTAAAGTACCCACTTTATGATCCTTATAAATGTCCATTCATAGATCCACAGTTTAACTGTAAGAAGTATGGTCGTCCTGACAATGCTTACCTTAAGTATCGATGGCAACCATCTTCTTGCTCTCTCCCCAGATTCAATGGGTTGTATTTCTTGAGGAGGATGAGAGGGAAGAAGATAATGTTCGTTGGAGATTCACTAAGCACAAACATGTGGCAATCTCTTGCTTGTCTAATTCACTCTTGGGTTCCTAACACTCGTTACACTCTTATTCGCCAAAAGGGTCTTGCTTCACTTACCTTTGAGGAATACGGAGTGACGTTGTTGCTATACAGAACACAGTTCTTGGTAGATTTGAATGTGGAGAAAGTTGGGAGAGTGCTTAAGCTTGATTCCATTAAGCAAGGGAATATGTGGAGAGGCATGGACGTTTTGATTTTCAACTCGTGGCATTGGTGGACACACACCGAACACATTCAGCCGTGGGATTACATGGAAGATGGGAATAGGTTGTACAAAGACATGAACCGGCTCGTTGCTTTCTACAAAGGAATGACCACTTGGGCTCGATGGGTTAATGCTTACGTCGATCCTTCTAAGACTAAAGTCTTCTTCAACGGCGTGTCTCCTACTCATTACGAGGGAAAGGATTGGGGAGAGCCAATGAACTCATGTAGGAGTCAAACGCAGCCATTTTACGGAAGGAAGTATCCAGGAGGGACACCAATGGCTTGGGTGATTCTAAACAAAGTGATGAGGAGATTGAAGAAACCGGTCCATTGGCTCGATATAACCGGTCTGTCTCAGCTTCGTAAAGATGCTCATCCTTCTGCTTTCAGTGGGAACCATCCTGGTAATGACTGTAGCCATTGGTGTCTCCCTGGTTTGCCTGATACTTGGAACTTGCTCTTTTACTCTACTCTTTTCTCTTCTTAA
Protein Sequence
- >AT2G42570.1
MGFTSRGNPSFLFFFFFFLCLSTVSAYINSTSSNNDEVRRELASGRCNWFRGNWVYDVKYPLYDPYKCPFIDPQFNCKKYGRPDNAYLKYRWQPSSCSLPRFNGLYFLRRMRGKKIMFVGDSLSTNMWQSLACLIHSWVPNTRYTLIRQKGLASLTFEEYGVTLLLYRTQFLVDLNVEKVGRVLKLDSIKQGNMWRGMDVLIFNSWHWWTHTEHIQPWDYMEDGNRLYKDMNRLVAFYKGMTTWARWVNAYVDPSKTKVFFNGVSPTHYEGKDWGEPMNSCRSQTQPFYGRKYPGGTPMAWVILNKVMRRLKKPVHWLDITGLSQLRKDAHPSAFSGNHPGNDCSHWCLPGLPDTWNLLFYSTLFSS