Information report for AT2G42570
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- GO:0005794 — is active in — Golgi apparatus
- GO:0007049 — acts upstream of or within — cell cycle
- GO:0048507 — acts upstream of or within — meristem development
- GO:0009506 — located in — plasmodesma
- GO:0016413 — enables — O-acetyltransferase activity
- GO:0048869 — acts upstream of or within — cellular developmental process
- GO:0048367 — acts upstream of or within — shoot system development
- GO:0022607 — acts upstream of or within — cellular component assembly
- GO:0005773 — located in — vacuole
Functional Keywords
Literature and News
- The FHY3 and FAR1 genes encode transposase-related proteins involved in regulation of gene expression by the phytochrome A-signaling pathway. DOI: 10.1046/j.1365-313x.2003.01741.x ; PMID: 12753585
- Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. DOI: 10.1002/pmic.200300607 ; PMID: 14760709
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- Comparison of gene expression in segregating families identifies genes and genomic regions involved in a novel adaptation, zinc hyperaccumulation. DOI: 10.1111/j.1365-294X.2006.02981.x ; PMID: 16911220
- Arabidopsis ESK1 encodes a novel regulator of freezing tolerance. DOI: 10.1111/j.1365-313X.2006.02994.x ; PMID: 17316173
- TRICHOME BIREFRINGENCE and its homolog AT5G01360 encode plant-specific DUF231 proteins required for cellulose biosynthesis in Arabidopsis. DOI: 10.1104/pp.110.153320 ; PMID: 20388664
- Involvement of TBL/DUF231 proteins into cell wall biology. DOI: 10.4161/psb.5.8.12414 ; PMID: 20657172
- Molecular Mechanism of Polysaccharide Acetylation by the Arabidopsis Xylan O-acetyltransferase XOAT1. DOI: 10.1105/tpc.20.00028 ; PMID: 32354790
- Large-scale characterization of integral proteins from Arabidopsis vacuolar membrane by two-dimensional liquid chromatography. DOI: 10.1002/pmic.200300607 ; PMID: 14760709
Gene Resources
- UniProt: A0A654F189
- EMBL: CACRSJ010000105
- AlphaFoldDB: A0A654F189
- EnsemblPlants: AT2G42570.1
- Gramene: AT2G42570.1
- KEGG: ath:AT2G42570
- Orthologous matrix: DWNQPAR
- ExpressionAtlas: AT2G42570
- InterPro: IPR025846, IPR026057, IPR029962
- PANTHER: PTHR32285, PTHR32285:SF71
- SWISS-MODEL: A0A654F189
Homologs
- Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VG61HV, arahy.Tifrunner.gnm1.ann1.T8K23Z, arahy.Tifrunner.gnm1.ann1.XZ6HV0
- Brassica napus GSBRNA2T00106144001
- Brassica oleracea Bo5g127700
- Daucus carota DCAR_017590, DCAR_013290
- Oryza sativa OsTBL2, OsTBL1
- Setaria viridis Sevir.9G255600.1.p
- Vitis vinifera VIT_219s0014g00510
Sequences
cDNA Sequence
- >AT2G42570.1
ACGATGATTTATTATTGATAACACGAAATTAACCAATAAACATTGTTGGTTTTTCAAAGTCTTGGTTTCAGCTTATTTGAACCAAGCTAACTAAAAACAGTGTTGCAAATTTCAACATTTTCTTACTGTTGAGATAATTTAAAGAAACGAAAAGAACTACTAATTTACTACAGTAAAAAATTCTAAAACAAGAGAAGTAAAATATTGGAAGGTACCTAGTACCAAATTAACTAATATAAATCGAATAAAGACATATAAAGGATCTTGTTTCTTGTTTCCCCCTTCCCATGTGATGTGAACAATCTCACTCTCTTTCTCTATCTCTCTTTCGAGTTTCTTTGGAGTATTATATAACAAATCAGTCCAAGACACCTCTTTTCTCACACCAATCTCGCTCTCACCACAAAACAGAGAATCTCAGATCGAAGAAGCAAAGAAAGAGAGAATGGGTTTCACTTCCCGAGGAAACCCTTCTTTTCTCTTCTTCTTCTTCTTCTTCCTCTGTCTCTCCACAGTCTCTGCTTACATCAACAGCACAAGCAGCAATAATGATGAAGTAAGAAGAGAGCTAGCTTCTGGGAGATGTAATTGGTTTAGAGGGAATTGGGTTTATGATGTAAAGTACCCACTTTATGATCCTTATAAATGTCCATTCATAGATCCACAGTTTAACTGTAAGAAGTATGGTCGTCCTGACAATGCTTACCTTAAGTATCGATGGCAACCATCTTCTTGCTCTCTCCCCAGATTCAATGGGTTGTATTTCTTGAGGAGGATGAGAGGGAAGAAGATAATGTTCGTTGGAGATTCACTAAGCACAAACATGTGGCAATCTCTTGCTTGTCTAATTCACTCTTGGGTTCCTAACACTCGTTACACTCTTATTCGCCAAAAGGGTCTTGCTTCACTTACCTTTGAGGAATACGGAGTGACGTTGTTGCTATACAGAACACAGTTCTTGGTAGATTTGAATGTGGAGAAAGTTGGGAGAGTGCTTAAGCTTGATTCCATTAAGCAAGGGAATATGTGGAGAGGCATGGACGTTTTGATTTTCAACTCGTGGCATTGGTGGACACACACCGAACACATTCAGCCGTGGGATTACATGGAAGATGGGAATAGGTTGTACAAAGACATGAACCGGCTCGTTGCTTTCTACAAAGGAATGACCACTTGGGCTCGATGGGTTAATGCTTACGTCGATCCTTCTAAGACTAAAGTCTTCTTCAACGGCGTGTCTCCTACTCATTACGAGGGAAAGGATTGGGGAGAGCCAATGAACTCATGTAGGAGTCAAACGCAGCCATTTTACGGAAGGAAGTATCCAGGAGGGACACCAATGGCTTGGGTGATTCTAAACAAAGTGATGAGGAGATTGAAGAAACCGGTCCATTGGCTCGATATAACCGGTCTGTCTCAGCTTCGTAAAGATGCTCATCCTTCTGCTTTCAGTGGGAACCATCCTGGTAATGACTGTAGCCATTGGTGTCTCCCTGGTTTGCCTGATACTTGGAACTTGCTCTTTTACTCTACTCTTTTCTCTTCTTAATTAATTCCTTTCTCATCAATGTATAAGTTAACTTAAAACAACAATCAATTATTTTTAGTTATCTTTCACTATGGTTGTTTGTTTCTTGACTGAAACAACTCTTAAATAAGACCAACGCACTTGACTCTGTGAAATGAGAAAACATGTCAAGAAAAGATTATACAAC
CDS Sequence
- >AT2G42570.1
ATGGGTTTCACTTCCCGAGGAAACCCTTCTTTTCTCTTCTTCTTCTTCTTCTTCCTCTGTCTCTCCACAGTCTCTGCTTACATCAACAGCACAAGCAGCAATAATGATGAAGTAAGAAGAGAGCTAGCTTCTGGGAGATGTAATTGGTTTAGAGGGAATTGGGTTTATGATGTAAAGTACCCACTTTATGATCCTTATAAATGTCCATTCATAGATCCACAGTTTAACTGTAAGAAGTATGGTCGTCCTGACAATGCTTACCTTAAGTATCGATGGCAACCATCTTCTTGCTCTCTCCCCAGATTCAATGGGTTGTATTTCTTGAGGAGGATGAGAGGGAAGAAGATAATGTTCGTTGGAGATTCACTAAGCACAAACATGTGGCAATCTCTTGCTTGTCTAATTCACTCTTGGGTTCCTAACACTCGTTACACTCTTATTCGCCAAAAGGGTCTTGCTTCACTTACCTTTGAGGAATACGGAGTGACGTTGTTGCTATACAGAACACAGTTCTTGGTAGATTTGAATGTGGAGAAAGTTGGGAGAGTGCTTAAGCTTGATTCCATTAAGCAAGGGAATATGTGGAGAGGCATGGACGTTTTGATTTTCAACTCGTGGCATTGGTGGACACACACCGAACACATTCAGCCGTGGGATTACATGGAAGATGGGAATAGGTTGTACAAAGACATGAACCGGCTCGTTGCTTTCTACAAAGGAATGACCACTTGGGCTCGATGGGTTAATGCTTACGTCGATCCTTCTAAGACTAAAGTCTTCTTCAACGGCGTGTCTCCTACTCATTACGAGGGAAAGGATTGGGGAGAGCCAATGAACTCATGTAGGAGTCAAACGCAGCCATTTTACGGAAGGAAGTATCCAGGAGGGACACCAATGGCTTGGGTGATTCTAAACAAAGTGATGAGGAGATTGAAGAAACCGGTCCATTGGCTCGATATAACCGGTCTGTCTCAGCTTCGTAAAGATGCTCATCCTTCTGCTTTCAGTGGGAACCATCCTGGTAATGACTGTAGCCATTGGTGTCTCCCTGGTTTGCCTGATACTTGGAACTTGCTCTTTTACTCTACTCTTTTCTCTTCTTAA
Protein Sequence
- >AT2G42570.1
MGFTSRGNPSFLFFFFFFLCLSTVSAYINSTSSNNDEVRRELASGRCNWFRGNWVYDVKYPLYDPYKCPFIDPQFNCKKYGRPDNAYLKYRWQPSSCSLPRFNGLYFLRRMRGKKIMFVGDSLSTNMWQSLACLIHSWVPNTRYTLIRQKGLASLTFEEYGVTLLLYRTQFLVDLNVEKVGRVLKLDSIKQGNMWRGMDVLIFNSWHWWTHTEHIQPWDYMEDGNRLYKDMNRLVAFYKGMTTWARWVNAYVDPSKTKVFFNGVSPTHYEGKDWGEPMNSCRSQTQPFYGRKYPGGTPMAWVILNKVMRRLKKPVHWLDITGLSQLRKDAHPSAFSGNHPGNDCSHWCLPGLPDTWNLLFYSTLFSS