Gene Details:

  • Gene ID: AT2G42430
  • Gene Symbol: ASL18, LBD16
  • Gene Name: ASYMMETRIC LEAVES2-LIKE 18, lateral organ boundaries-domain 16
  • Description: lateral organ boundaries-domain 16;(source:Araport11)
  • TAIR Accession: locus:2053807
  • Genome: Araport11_genome_release
  • Species: Arabidopsis thaliana

Transcripts:

Plant Ontology Annotations:

  • PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
  • PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
  • PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
  • PO:0005052  — plant callus — callo (Spanish, exact), portion of plant callus tissue (exact), 植物カルス (Japanese, exact), callus (broad)

Gene Ontology:

  • GO:1990110  — acts upstream of or within — callus formation
  • GO:0000976  — enables — transcription cis-regulatory region binding
  • GO:0009755  — involved in — hormone-mediated signaling pathway
  • GO:0045893  — involved in — positive regulation of DNA-templated transcription
  • GO:0005634  — located in — nucleus
  • GO:1990841  — enables — promoter-specific chromatin binding
  • GO:0010311  — acts upstream of or within — lateral root formation
  • GO:0046982  — enables — protein heterodimerization activity
  • GO:0005634  — is active in — nucleus
  • GO:0010311  — involved in — lateral root formation

Germplasm Phenotype:

  • lbd16-1  — Mutant plants appeared very similar to wild-type plants at both seedling and adult stages. Root growth was inhibited to almost the same extent in both wild-type and mutant seedlings in response to exogenous auxin. In addition, the lbd16-1 mutation did not affect auxin-regulated gene expression, because auxin-induced IAA5, IAA19, LBD29, and LBD33 to a similar degree in mutant and wild-type seedlings.
  • lbd16-1  — The number of lateral roots was reduced slightly in 7-d old mutant seedlings compared to the wild type. Although exogenous auxin induced lateral root formation in mutant as in wild-type seedlings, there were fewer lateral roots in auxin-treated mutant than in the wild type.

Literature:

Sequences:

cDNA Sequence
  • >AT2G42430.1
    GCCCAAGAAAGAAAAGAAAAAAAAAAAACTCTTTCTCTCTCATGATAATGTTCCTTTTATAAAATCCACCCAAAGACACCAAACACTTCTCCATCATCATTTCATTTCTTGTTCTTTTTCCACCATCACCATTTCCTAGTTCGCTCGTGCACATCTCCGACGATCCCAATTCTAAAATCATCACTTCTTCCAATCTTTTCAACATCTCTTCAAAATATCCAGTCAACAAAAAAAAAAGTACTTAAAACAAGGAAACCCCTTCTTTCTTTTTGTACATATAACATAAAAATCATCACTTTTTTGTTCGTTTCGCCGATGGCATCTTCCGGTAACGGTACAACGGCGGGGACAGGTTCACCATGCGGTGCATGCAAGTTCTTGAGGAGGAAGTGCGCATCCGATTGTATATTTGCACCGTACTTCTCATCGGAGCAAGGAGCAGCAAGATTCGCAGCTATTCACAAGGTGTTTGGAGCAAGCAACGTTTCTAAGCTCTTGCTTAATGTTCCAATCCATGATCGATGTGAAGCTGTCGTCACCATCGCCTACGAAGCTCAGGCTCGTCTTCATGACCCTGTTTATGGATGTGTCTCTCATATCTTTGCCCTCCAACAACAGGTGGCTTTCTTGCAATCACAAGTCATGCAAATGAAGGCACAGATAGCTGGCCACCAGACGTCAGCCGCCGGAGATCTAAGACACAGCTCGGAAAGTACCAACCAGTTTATGACGTGGCAACAAACTAGTGTCTCTCCGATCGGTAGTGCATACTCAACACCGTATAACCATCATCAACCTTACTACGGTCATGTAAACCCTAACAATCCGGTCTCGCCACAGAGCTCGCTAGAAGAATCTTTCAGCAACACGAGCAGTGACGTCACCACAACAGCCAACGTGCGAGAGACTCATCATCAAACCGGAGGAGGAGTATACGGTCACGATGGAATAGGGTTTCACGAAGGATATCCTAACAAGAAGAGATCAGTGAGTTATTGTAGTAGCGATTTAGGTGAGCTTCAGGCTTTGGCTCTTAGAATGATGAAGAACTAAGATAAGTTGGTAAGTTATGTAGACAGTCAGAGAACAAATGAGATGTTTTTATTCGAAGAAAAAAAAAACAAGACAATAGAACATTCCATGTTCACATGCTATCATCAATAAGATGTCTACTACACATCCATGTTTGCTTTAAGTCACTGGCCATTGATCAATCACTGAAATATTTGACTTGACA
CDS Sequence
  • >AT2G42430.1
    ATGGCATCTTCCGGTAACGGTACAACGGCGGGGACAGGTTCACCATGCGGTGCATGCAAGTTCTTGAGGAGGAAGTGCGCATCCGATTGTATATTTGCACCGTACTTCTCATCGGAGCAAGGAGCAGCAAGATTCGCAGCTATTCACAAGGTGTTTGGAGCAAGCAACGTTTCTAAGCTCTTGCTTAATGTTCCAATCCATGATCGATGTGAAGCTGTCGTCACCATCGCCTACGAAGCTCAGGCTCGTCTTCATGACCCTGTTTATGGATGTGTCTCTCATATCTTTGCCCTCCAACAACAGGTGGCTTTCTTGCAATCACAAGTCATGCAAATGAAGGCACAGATAGCTGGCCACCAGACGTCAGCCGCCGGAGATCTAAGACACAGCTCGGAAAGTACCAACCAGTTTATGACGTGGCAACAAACTAGTGTCTCTCCGATCGGTAGTGCATACTCAACACCGTATAACCATCATCAACCTTACTACGGTCATGTAAACCCTAACAATCCGGTCTCGCCACAGAGCTCGCTAGAAGAATCTTTCAGCAACACGAGCAGTGACGTCACCACAACAGCCAACGTGCGAGAGACTCATCATCAAACCGGAGGAGGAGTATACGGTCACGATGGAATAGGGTTTCACGAAGGATATCCTAACAAGAAGAGATCAGTGAGTTATTGTAGTAGCGATTTAGGTGAGCTTCAGGCTTTGGCTCTTAGAATGATGAAGAACTAA
Protein Sequence
  • >AT2G42430.1
    MASSGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAAGDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEESFSNTSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALALRMMKN