Information report for AT2G42410
Gene Details
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Functional Descriptions
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0005634 — located in — nucleus
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Conservation, diversification and expansion of C2H2 zinc finger proteins in the Arabidopsis thaliana genome. DOI: 10.1186/1471-2164-5-39 ; PMID: 15236668
- Patterns of expansion and expression divergence in the plant polygalacturonase gene family. DOI: 10.1186/gb-2006-7-9-r87 ; PMID: 17010199
- Improvement of a monopartite ecdysone receptor gene switch and demonstration of its utility in regulation of transgene expression in plants. DOI: 10.1111/j.1742-4658.2008.06370.x ; PMID: 18384377
- Arabidopsis ZINC FINGER PROTEIN1 Acts Downstream of GL2 to Repress Root Hair Initiation and Elongation by Directly Suppressing bHLH Genes. DOI: 10.1105/tpc.19.00226 ; PMID: 31732703
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Improvement of a monopartite ecdysone receptor gene switch and demonstration of its utility in regulation of transgene expression in plants. DOI: 10.1111/j.1742-4658.2008.06370.x ; PMID: 18384377
Gene Resources
- UniProt: A0A5S9X6V9
- EMBL: CACSHJ010000088
- AlphaFoldDB: A0A5S9X6V9
- EnsemblPlants: AT2G42410.3
- Gramene: AT2G42410.3
- ExpressionAtlas: AT2G42410
- InterPro: IPR013087, IPR036236, IPR052426
- PANTHER: PTHR45801, PTHR45801:SF102
- SUPFAM: SSF57667
- PROSITE: PS00028, PS50157
- Gene3D: 3.30.160.60
- OrthoDB: A0A5S9X6V9
Homologs
- Brassica napus GSBRNA2T00084709001, GSBRNA2T00042309001, GSBRNA2T00088593001, GSBRNA2T00132721001
- Brassica oleracea XP_013636089.1, XP_013636088.1, XP_013636087.1, XP_013635313.1, XP_013635312.1
- Brassica rapa XP_009142836.1, XP_009142062.1, XP_009142061.1, XP_009142060.1, XP_009142059.1
- Raphanus raphanistrum RrC4772_p2
Sequences
cDNA Sequence
- >AT2G42410.3
CAAACATGTAACAGACTTAAACCCTAATAAATGATCATCCGTACATGCACCTCCTTCCTCAAGGGAGTATCATACTATCTTCATCATTCACCACCAGCATTGATCATCATCTGTTGGAAAATATGAAGAGAACACATTTGGCAAGTTTTAGTAACAGAGACAAAACCCAAGAAGAAGAAGGAGAAGACGGTAATGGTGACAACAGAGTCATCATGAATCACTACAAGAATTACGAAGCTGGGCTGATCCCATGGCCTCCCAAGAATTACACTTGCAGCTTCTGCAGGAGAGAGTTCAGATCTGCTCAAGCACTTGGAGGCCACATGAATGTTCATAGAAGAGACAGAGCAAAACTCAGGCAGATCCCTTCTTGGCTCTTCGAACCTCACCACCACACACCTATTGCAAACCCTAACCCTAATTTTAGCTCTTCTTCTTCCTCTTCAACAACAACAGCTCATCTTGAGCCTTCCCTAACCAACCAGAGATCCAAAACCACTCCTTTTCCTTCTGCCCGGTTTGATCTTTTGGACAGTACTACTAGCTATGGAGGTTTGATGATGGACAGAGAGAAGAACAAGAGCAATGTATGTAGCAGAGAGATCAAGAAAAGTGCCATCGATGCATGTCATTCAGTAAGATGTGAGATAAGCCGTGGGGATCTGATGAATAAGAAAGATGATCAAGTCATGGGGTTGGAGCTTGGGATGAGTTTGAGGAATCCCAACCAAGTTCTTGATTTGGAGCTTCGACTAGGCTACCTCTAAATTCTTTTGATTAGCTAGTATTTGTACTTCAAAATTATATCTAGTATAATCATGTTTAGCTGAGCAGTACGTGAGCTAGAGATTGTGATTGCATTCAGGCTAATGGTATTAAATAGTATTAGGCTTAAATTTATTGGAAGTCAAAATGAAATTAAAGTTGAAAAAATCTCCATATGATTTTT - >AT2G42410.1
CAAACATGTAACAGACTTAAACCCTAATAAATGATCATCCGTACATGCACCTCCTTCCTCAAGGGAGTATCATACTATCTTCATCATTCACCACCAGCATTGATCATCATCTGTTGGAAAATATGAAGAGAACACATTTGGCAAGTTTTAGTAACAGAGACAAAACCCAAGAAGAAGAAGGAGAAGACGGTAATGGTGACAACAGAGTCATCATGAATCACTACAAGAATTACGAAGCTGGGCTGATCCCATGGCCTCCCAAGAATTACACTTGCAGCTTCTGCAGGAGAGAGTTCAGATCTGCTCAAGCACTTGGAGGCCACATGAATGTTCATAGAAGAGACAGAGCAAAACTCAGGCAGATCCCTTCTTGGCTCTTCGAACCTCACCACCACACACCTATTGCAAACCCTAACCCTAATTTTAGCTCTTCTTCTTCCTCTTCAACAACAACAGCTCATCTTGAGCCTTCCCTAACCAACCAGAGATCCAAAACCACTCCTTTTCCTTCTGCCCGGTTTGATCTTTTGGACAGTACTACTAGCTATGGAGGTTTGATGATGGACAGAGAGAAGAACAAGAGCAATGTATGTAGCAGAGAGATCAAGAAAAGTGCCATCGATGCATGTCATTCAGTAAGATGTGAGATAAGCCGTGGGGATCTGATGAATAAGAAAGATGATCAAGTCATGGGGTTGGAGCTTGGGATGAGTTTGAGGAATCCCAACCAAGTTCTTGATTTGGAGCTTCGACTAGGCTACCTCTAAATTCTTTTGATTAGCTAGTATTTGTACTTCAAAATTATATCTAGTATAATCATGTTTAGCTGAGCAGTACGTGAGCTAGAGATTGTGATTGCATTCAGGCTAATGGTATTAAATAGTATTAGGCTTAAATTTATTGGAAGTCAAAATGAAATTAAAGTTGAAAAAATCTCCATATGATTTTT - >AT2G42410.2
CAAACATGTAACAGACTTAAACCCTAATAAATGATCATCCGTACATGCACCTCCTTCCTCAAGGGAGTATCATACTATCTTCATCATTCACCACCAGCATTGATCATCATCTGTTGGAAAATATGAAGAGAACACATTTGGCAAGTTTTAGTAACAGAGACAAAACCCAAGAAGAAGAAGGAGAAGACGGTAATGGTGACAACAGAGTCATCATGAATCACTACAAGAATTACGAAGCTGGGCTGATCCCATGGCCTCCCAAGAATTACACTTGCAGCTTCTGCAGGAGAGAGTTCAGATCTGCTCAAGCACTTGGAGGCCACATGAATGTTCATAGAAGAGACAGAGCAAAACTCAGGCAGATCCCTTCTTGGCTCTTCGAACCTCACCACCACACACCTATTGCAAACCCTAACCCTAATTTTAGCTCTTCTTCTTCCTCTTCAACAACAACAGCTCATCTTGAGCCTTCCCTAACCAACCAGAGATCCAAAACCACTCCTTTTCCTTCTGCCCGGTTTGATCTTTTGGACAGTACTACTAGCTATGGAGGTTTGATGATGGACAGAGAGAAGAACAAGAGCAATGTATGTAGCAGAGAGATCAAGAAAAGTGCCATCGATGCATGTCATTCAGTAAGATGTGAGATAAGCCGTGGGGATCTGATGAATAAGAAAGATGATCAAGTCATGGGGTTGGAGCTTGGGATGAGTTTGAGGAATCCCAACCAAGTTCTTGATTTGGAGCTTCGACTAGGCTACCTCTAAATTCTTTTGATTAGCTAGTATTTGTACTTCAAAATTATATCTAGTATAATCATGTTTAGCTGAGCAGTACGTGAGCTAGAGATTGTGATTGCATTCAGGCTAATGGTATTAAATAGTATTAGGCTTAAATTTATTGGAAGTCAAAATGAAATTAAAGTTGAAAAAATCTCCATATGATTTTT
CDS Sequence
- >AT2G42410.3
ATGCACCTCCTTCCTCAAGGGAGTATCATACTATCTTCATCATTCACCACCAGCATTGATCATCATCTGTTGGAAAATATGAAGAGAACACATTTGGCAAGTTTTAGTAACAGAGACAAAACCCAAGAAGAAGAAGGAGAAGACGGTAATGGTGACAACAGAGTCATCATGAATCACTACAAGAATTACGAAGCTGGGCTGATCCCATGGCCTCCCAAGAATTACACTTGCAGCTTCTGCAGGAGAGAGTTCAGATCTGCTCAAGCACTTGGAGGCCACATGAATGTTCATAGAAGAGACAGAGCAAAACTCAGGCAGATCCCTTCTTGGCTCTTCGAACCTCACCACCACACACCTATTGCAAACCCTAACCCTAATTTTAGCTCTTCTTCTTCCTCTTCAACAACAACAGCTCATCTTGAGCCTTCCCTAACCAACCAGAGATCCAAAACCACTCCTTTTCCTTCTGCCCGGTTTGATCTTTTGGACAGTACTACTAGCTATGGAGGTTTGATGATGGACAGAGAGAAGAACAAGAGCAATGTATGTAGCAGAGAGATCAAGAAAAGTGCCATCGATGCATGTCATTCAGTAAGATGTGAGATAAGCCGTGGGGATCTGATGAATAAGAAAGATGATCAAGTCATGGGGTTGGAGCTTGGGATGAGTTTGAGGAATCCCAACCAAGTTCTTGATTTGGAGCTTCGACTAGGCTACCTCTAA - >AT2G42410.1
ATGCACCTCCTTCCTCAAGGGAGTATCATACTATCTTCATCATTCACCACCAGCATTGATCATCATCTGTTGGAAAATATGAAGAGAACACATTTGGCAAGTTTTAGTAACAGAGACAAAACCCAAGAAGAAGAAGGAGAAGACGGTAATGGTGACAACAGAGTCATCATGAATCACTACAAGAATTACGAAGCTGGGCTGATCCCATGGCCTCCCAAGAATTACACTTGCAGCTTCTGCAGGAGAGAGTTCAGATCTGCTCAAGCACTTGGAGGCCACATGAATGTTCATAGAAGAGACAGAGCAAAACTCAGGCAGATCCCTTCTTGGCTCTTCGAACCTCACCACCACACACCTATTGCAAACCCTAACCCTAATTTTAGCTCTTCTTCTTCCTCTTCAACAACAACAGCTCATCTTGAGCCTTCCCTAACCAACCAGAGATCCAAAACCACTCCTTTTCCTTCTGCCCGGTTTGATCTTTTGGACAGTACTACTAGCTATGGAGGTTTGATGATGGACAGAGAGAAGAACAAGAGCAATGTATGTAGCAGAGAGATCAAGAAAAGTGCCATCGATGCATGTCATTCAGTAAGATGTGAGATAAGCCGTGGGGATCTGATGAATAAGAAAGATGATCAAGTCATGGGGTTGGAGCTTGGGATGAGTTTGAGGAATCCCAACCAAGTTCTTGATTTGGAGCTTCGACTAGGCTACCTCTAA - >AT2G42410.2
ATGCACCTCCTTCCTCAAGGGAGTATCATACTATCTTCATCATTCACCACCAGCATTGATCATCATCTGTTGGAAAATATGAAGAGAACACATTTGGCAAGTTTTAGTAACAGAGACAAAACCCAAGAAGAAGAAGGAGAAGACGGTAATGGTGACAACAGAGTCATCATGAATCACTACAAGAATTACGAAGCTGGGCTGATCCCATGGCCTCCCAAGAATTACACTTGCAGCTTCTGCAGGAGAGAGTTCAGATCTGCTCAAGCACTTGGAGGCCACATGAATGTTCATAGAAGAGACAGAGCAAAACTCAGGCAGATCCCTTCTTGGCTCTTCGAACCTCACCACCACACACCTATTGCAAACCCTAACCCTAATTTTAGCTCTTCTTCTTCCTCTTCAACAACAACAGCTCATCTTGAGCCTTCCCTAACCAACCAGAGATCCAAAACCACTCCTTTTCCTTCTGCCCGGTTTGATCTTTTGGACAGTACTACTAGCTATGGAGGTTTGATGATGGACAGAGAGAAGAACAAGAGCAATGTATGTAGCAGAGAGATCAAGAAAAGTGCCATCGATGCATGTCATTCAGTAAGATGTGAGATAAGCCGTGGGGATCTGATGAATAAGAAAGATGATCAAGTCATGGGGTTGGAGCTTGGGATGAGTTTGAGGAATCCCAACCAAGTTCTTGATTTGGAGCTTCGACTAGGCTACCTCTAA
Protein Sequence
- >AT2G42410.3
MHLLPQGSIILSSSFTTSIDHHLLENMKRTHLASFSNRDKTQEEEGEDGNGDNRVIMNHYKNYEAGLIPWPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNPNFSSSSSSSTTTAHLEPSLTNQRSKTTPFPSARFDLLDSTTSYGGLMMDREKNKSNVCSREIKKSAIDACHSVRCEISRGDLMNKKDDQVMGLELGMSLRNPNQVLDLELRLGYL - >AT2G42410.1
MHLLPQGSIILSSSFTTSIDHHLLENMKRTHLASFSNRDKTQEEEGEDGNGDNRVIMNHYKNYEAGLIPWPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNPNFSSSSSSSTTTAHLEPSLTNQRSKTTPFPSARFDLLDSTTSYGGLMMDREKNKSNVCSREIKKSAIDACHSVRCEISRGDLMNKKDDQVMGLELGMSLRNPNQVLDLELRLGYL - >AT2G42410.2
MHLLPQGSIILSSSFTTSIDHHLLENMKRTHLASFSNRDKTQEEEGEDGNGDNRVIMNHYKNYEAGLIPWPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIANPNPNFSSSSSSSTTTAHLEPSLTNQRSKTTPFPSARFDLLDSTTSYGGLMMDREKNKSNVCSREIKKSAIDACHSVRCEISRGDLMNKKDDQVMGLELGMSLRNPNQVLDLELRLGYL