Information report for AT2G42400
Gene Details
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Functional Descriptions
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0009067 — filament — filamento (Spanish, exact), 花糸 (Japanese, exact), Poaceae filament (narrow), Zea filament (narrow)
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- GO:0005737 — located in — cytoplasm
- GO:0045893 — acts upstream of or within — positive regulation of DNA-templated transcription
- GO:0005515 — enables — protein binding
- GO:0005634 — located in — nucleus
- GO:0045893 — involved in — positive regulation of DNA-templated transcription
- GO:0048578 — involved in — positive regulation of long-day photoperiodism, flowering
- GO:0048574 — involved in — long-day photoperiodism, flowering
- GO:0043565 — enables — sequence-specific DNA binding
- GO:0009651 — acts upstream of or within — response to salt stress
- GO:0005634 — is active in — nucleus
- SALK_115813C — Seed germination rate, seedling growth affected, primary root length under salt stress in a concentration-dependent manner.
- voz-1 voz-2 — Suppressed growth and leaf vein clearing in older leaves. Delayed germination, seedling growth, and root length as result of salt stress. Increased sensitivity to salt stress as compared to single mutants.
Functional Keywords
- fruit , root , vascular leaf , flower , stem , filament , shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , plant sperm cell , pollen tube cell , pollen
Literature and News
- VOZ; isolation and characterization of novel vascular plant transcription factors with a one-zinc finger from Arabidopsis thaliana. DOI: 10.1093/pcp/pch101 ; PMID: 15295067
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The phytochrome-interacting vascular plant one-zinc finger1 and VOZ2 redundantly regulate flowering in Arabidopsis. DOI: 10.1105/tpc.112.101915 ; PMID: 22904146
- Vascular plant one-zinc-finger protein 1/2 transcription factors regulate abiotic and biotic stress responses in Arabidopsis. DOI: 10.1111/tpj.12069 ; PMID: 23167462
- Overexpression of VOZ2 confers biotic stress tolerance but decreases abiotic stress resistance in Arabidopsis. DOI: 10.4161/psb.23358 ; PMID: 23299334
- Arabidopsis thaliana VOZ (Vascular plant One-Zinc finger) transcription factors are required for proper regulation of flowering time. DOI: 10.1242/bio.20133764 ; PMID: 23616927
- VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. DOI: 10.1080/09168451.2014.932670 ; PMID: 25351333
- Vascular plant one-zinc-finger protein 2 is localized both to the nucleus and stress granules under heat stress in Arabidopsis. DOI: 10.1080/15592324.2017.1295907 ; PMID: 28277968
- VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. DOI: 10.1104/pp.17.01562 ; PMID: 29507119
- The E3 ligase BRUTUS facilitates degradation of VOZ1/2 transcription factors. DOI: 10.1111/pce.13363 ; PMID: 29878379
- Vascular Plant One-Zinc-Finger (VOZ) Transcription Factors Are Positive Regulators of Salt Tolerance in Arabidopsis. DOI: 10.3390/ijms19123731 ; PMID: 30477148
- Vascular plant one-zinc finger 1 (VOZ1) and VOZ2 negatively regulate phytochrome B-mediated seed germination in Arabidopsis. DOI: 10.1080/09168451.2020.1740971 ; PMID: 32186471
- The IBI1 Receptor of β-Aminobutyric Acid Interacts with VOZ Transcription Factors to Regulate Abscisic Acid Signaling and Callose-Associated Defense. DOI: 10.1016/j.molp.2020.07.010 ; PMID: 32717347
- The DC1 Domain Protein BINUCLEATE POLLEN is Required for POLLEN Development in Arabidopsis thaliana. DOI: 10.1093/pcp/pcac122 ; PMID: 36001044
- VOZ; isolation and characterization of novel vascular plant transcription factors with a one-zinc finger from Arabidopsis thaliana. DOI: 10.1093/pcp/pch101 ; PMID: 15295067
Gene Resources
- UniProt: A0A178VSV5
- EMBL: LR881467, LUHQ01000002
- AlphaFoldDB: A0A178VSV5
- EnsemblPlants: AT2G42400.1
- Gramene: AT2G42400.1
- KEGG: ath:AT2G42400
- Orthologous matrix: QNKMGKL
- ExpressionAtlas: AT2G42400
- InterPro: IPR039277
- PANTHER: PTHR33873, PTHR33873:SF15
Homologs
- Juglans regia WALNUT_00007154-RA, WALNUT_00020456-RA
Sequences
cDNA Sequence
- >AT2G42400.1
CCTCCCCTCAATAGAAGATGAAACGCGGCGTTTCATAAATAAAAACGAGAAAATCAAAATCGTCGCTCTCTGTTTGCTGGCGTAACTTAGCCTTGTTCTTCTTCTTCATCGCGATATCTCCGGTGTCTTCTTCGTCTCCATCAGAAGAAGAAGCTCTCTGTATCCATCCATATCGAAAAACCAGAGATCGGAGGAAGGAGAGAGAGATACCAATCTCTGTTGCTTTGGTTTTAAGGGTTTAGAGGAGATGTCAAACCACCCGAAGATCACATCGGCGCATCAGAATGTGGAGGAGAAGCTAAGGGAACTTCAGGAGAGGTTCTGTCATCTTCAAGCTGCTAGGAAAGAAGGGCGGCATGGTGACCTTGCGCTTTTAGAAGCCCAAATCTCTCAGAATATTCGGGAGTGGCAAGCTGAACTCACTGCTCCTTCTCCTGAATCTTCTCTGTTGGGTGAAGGTATTAGCCAATTCCTTGAGGAGTTTGCTCCTCTGTTGAAATTAGACGAGGAGGATGATGCAACTAGTACGCTAAAAGAACATGCTGGAGCAAAGCCTGATCCTGAGGGTTTTTCTCAAAGCTTGTGCCCTCCTGAATGGACATCTGAGAATTTTAGTCAAAGTCCTTTCAACGGAAATTTCTCCTGCGGCTTTGAGGATGCTCTTAATAGCACAGAAACACATGGCCAGCAACTCCATTATGGATATGAAGGGTTTGATCCAAGCATAAACTCCGCTCCTGATTTCCATGACCAAAAACTCAGCAGCAACTTGGATATAACTTCTCAGTATGATTATATTTTCTCCGAAGTGCGTCAGGAACTAGATAACAGCCCTTCCACTAAGCTTGATTCTTCTGAAGAGATTGACAACTTTGCTGAATTTTCTACTCCATCAAGTGTCCGTGTGCCTCCATCTGCTTTTCTGGGACCTAAGTGTGCACTATGGGATTGCACAAGGCCTGCTCAGGGCTCCGAGTGGTACCTGGATTACTGCAGTAACTACCATGGGACTCTAGCTCTGAATGAAGATTCGCCTGGCACAGCACCTGTATTGAGGCCAGGGGGCATCAGTTTGAAAGATAATCTATTGATTGATGCTCTTCGTGCAAAGACTCAGGGTAAGAATGTTGGGATCCCAGTGTGTGAAGGAGCTGTTAACACAAAATGCCCATGGAACGCAGCAGAGCTATTTCATCTTGAACTGGTTGAAGGCGAAACAATTAGAGAGTGGCTCTTCTTTGACAAACCTAGAAGAGCATATGATAGCGGAAACCGAAAGCAAAGATCACTTCCAGATTACAGTGGAAGAGGTTGGCATGAATCAAGAAAACAACTGATGAAGGAACAAGAAGGCCAGAAGAGATCTTACTATATGGATCCACAACCTCCAGGTCCCTTTGAGTGGCATCTCTTTGAATACCAAATCAATGAATCTGACGCATGTGCGTTATATCGCCTAGAACTTAAAGTAGGAAATGGAAAGAAGAGTCCTAAGGGAAAGATTTCAAAAGACCCTCTGGCTGATCTGCAGAAGAAGATGGGACAGTTTAAAGTGGCTTCAGACAAACCCTCTCCTCCAACCAAAGGTCGTAAGGAGTGAAGTTAGCTATTGGTAATCTAACTCAAGACTCCTGCAACAATAGCTCCAAGTTGTCTCCAGCATTCTACAAAAGAGCCATCGCCACCTCTGTTTTCTTTTTTTTTTTCTTTCTGACTGTATTATGAAGAGATAGGATCTTTGATGTGTTGTGTTAATATGGACAAGTCTGGTCTTTGCCCTTTTTCTTGATAGAATCGTAGATGGGTTTGTAAATTTTTGCATTTTATTTTTCTCCTTTAAAACCACAAGGATTTTGTTAACGAAGTGGTGTATTCATATTTCAAAGGTACATTTGCAACACCATTGATTCTTTATTCCAA
CDS Sequence
- >AT2G42400.1
ATGTCAAACCACCCGAAGATCACATCGGCGCATCAGAATGTGGAGGAGAAGCTAAGGGAACTTCAGGAGAGGTTCTGTCATCTTCAAGCTGCTAGGAAAGAAGGGCGGCATGGTGACCTTGCGCTTTTAGAAGCCCAAATCTCTCAGAATATTCGGGAGTGGCAAGCTGAACTCACTGCTCCTTCTCCTGAATCTTCTCTGTTGGGTGAAGGTATTAGCCAATTCCTTGAGGAGTTTGCTCCTCTGTTGAAATTAGACGAGGAGGATGATGCAACTAGTACGCTAAAAGAACATGCTGGAGCAAAGCCTGATCCTGAGGGTTTTTCTCAAAGCTTGTGCCCTCCTGAATGGACATCTGAGAATTTTAGTCAAAGTCCTTTCAACGGAAATTTCTCCTGCGGCTTTGAGGATGCTCTTAATAGCACAGAAACACATGGCCAGCAACTCCATTATGGATATGAAGGGTTTGATCCAAGCATAAACTCCGCTCCTGATTTCCATGACCAAAAACTCAGCAGCAACTTGGATATAACTTCTCAGTATGATTATATTTTCTCCGAAGTGCGTCAGGAACTAGATAACAGCCCTTCCACTAAGCTTGATTCTTCTGAAGAGATTGACAACTTTGCTGAATTTTCTACTCCATCAAGTGTCCGTGTGCCTCCATCTGCTTTTCTGGGACCTAAGTGTGCACTATGGGATTGCACAAGGCCTGCTCAGGGCTCCGAGTGGTACCTGGATTACTGCAGTAACTACCATGGGACTCTAGCTCTGAATGAAGATTCGCCTGGCACAGCACCTGTATTGAGGCCAGGGGGCATCAGTTTGAAAGATAATCTATTGATTGATGCTCTTCGTGCAAAGACTCAGGGTAAGAATGTTGGGATCCCAGTGTGTGAAGGAGCTGTTAACACAAAATGCCCATGGAACGCAGCAGAGCTATTTCATCTTGAACTGGTTGAAGGCGAAACAATTAGAGAGTGGCTCTTCTTTGACAAACCTAGAAGAGCATATGATAGCGGAAACCGAAAGCAAAGATCACTTCCAGATTACAGTGGAAGAGGTTGGCATGAATCAAGAAAACAACTGATGAAGGAACAAGAAGGCCAGAAGAGATCTTACTATATGGATCCACAACCTCCAGGTCCCTTTGAGTGGCATCTCTTTGAATACCAAATCAATGAATCTGACGCATGTGCGTTATATCGCCTAGAACTTAAAGTAGGAAATGGAAAGAAGAGTCCTAAGGGAAAGATTTCAAAAGACCCTCTGGCTGATCTGCAGAAGAAGATGGGACAGTTTAAAGTGGCTTCAGACAAACCCTCTCCTCCAACCAAAGGTCGTAAGGAGTGA
Protein Sequence
- >AT2G42400.1
MSNHPKITSAHQNVEEKLRELQERFCHLQAARKEGRHGDLALLEAQISQNIREWQAELTAPSPESSLLGEGISQFLEEFAPLLKLDEEDDATSTLKEHAGAKPDPEGFSQSLCPPEWTSENFSQSPFNGNFSCGFEDALNSTETHGQQLHYGYEGFDPSINSAPDFHDQKLSSNLDITSQYDYIFSEVRQELDNSPSTKLDSSEEIDNFAEFSTPSSVRVPPSAFLGPKCALWDCTRPAQGSEWYLDYCSNYHGTLALNEDSPGTAPVLRPGGISLKDNLLIDALRAKTQGKNVGIPVCEGAVNTKCPWNAAELFHLELVEGETIREWLFFDKPRRAYDSGNRKQRSLPDYSGRGWHESRKQLMKEQEGQKRSYYMDPQPPGPFEWHLFEYQINESDACALYRLELKVGNGKKSPKGKISKDPLADLQKKMGQFKVASDKPSPPTKGRKE