Gene Details:
- Gene ID: AT2G42360
- Gene Symbol: ATL41
- Gene Name: Arabidopsis Tóxicos en Levadura 41
- Description: RING/U-box superfamily protein;(source:Araport11)
- TAIR Accession: locus:2053791
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Gene Ontology:
- GO:0004842 — enables — ubiquitin-protein transferase activity
Function-related keywords:
Literature:
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Expression profiling of the host response to bacterial infection: the transition from basal to induced defence responses in RPM1-mediated resistance. DOI: 10.1046/j.1365-313x.2003.01653.x ; PMID: 12609040
- The transcriptional innate immune response to flg22. Interplay and overlap with Avr gene-dependent defense responses and bacterial pathogenesis. DOI: 10.1104/pp.103.036749 ; PMID: 15181213
- Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis. DOI: 10.1104/pp.104.052423 ; PMID: 15644464
- Genome analysis and functional characterization of the E2 and RING-type E3 ligase ubiquitination enzymes of Arabidopsis. DOI: 10.1104/pp.105.067983 ; PMID: 16339806
- Expression profiling and mutant analysis reveals complex regulatory networks involved in Arabidopsis response to Botrytis infection. DOI: 10.1111/j.1365-313X.2006.02849.x ; PMID: 16925600
- A high-performance, small-scale microarray for expression profiling of many samples in Arabidopsis-pathogen studies. DOI: 10.1111/j.1365-313X.2006.02972.x ; PMID: 17181774
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Iron-dependent modifications of the flower transcriptome, proteome, metabolome, and hormonal content in an Arabidopsis ferritin mutant. DOI: 10.1093/jxb/ert112 ; PMID: 23682113
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
- Functional analysis of the RING-type ubiquitin ligase family of Arabidopsis. DOI: 10.1104/pp.104.052423 ; PMID: 15644464
Sequences:
cDNA Sequence
- >AT2G42360.1
GTGAAATCATAATAGGCAAATTCAGTCCACAAATTTTTTACGTAGGATTTTGATATTTTCCACTCTTTATATATACAGTCTATAATCTTCAAACCTATCACCTATAAATAATCTACAATCTACCATTTAGTCAACAATGGTGAAATTTCTAAACCCTCGTGAAAGTCTACCTATCTCCCAAAGTTTCTAATTCTATCTACTTCACATTTTTCTCCACCCACCAACTAAAGTATAAGCCTTGGAAAAACAATCAAAATAAGAAATTCTATAAGTCCTTTATTCCTTATATAATAAATCATAAGTTAGTAAACTCTTTTGTTCACTTTTCTTTTGCATCCACCGAAGAAAAACCAGCTTCACAATGAGCTCCAACGACAGAGATCATCGCAGGTTCAACTCTGACCACCACTCATTCTGGCCTAATCCGTCTACTTACGATCTTAACAGCAAGATCATGCTTGCCGCAGTGGCTTCTTTATCTGGAGTTATCCTCATCGTCTTCGCTCTTCATCTTTACGCAAGATTCGTTCTCCGACGCCGTAGAGAAGCTTTCCGTGGCCTCCCCGTCATTTTCCGCCACCCTTTTGAGATGCCTAAGCGTGGCCTCAATCCCACAGTCATCGCTTCTCTCCCTACTTTCACTGTTGGAGCCACTGATGGCGTGGCTGCCTCCGCTACTGAATGCGCAGTGTGTCTAAGCGTGTTAAAGGAGCAAGACAAGGCGAGAGAGTTGCCCAACTGCAAGCACATCTTCCACGTCGACTGTGTTGACACGTGGCTCACCACTTGCTCCACTTGTCCTGTTTGTCGGACTGAAGTTGAGCCAAGACCGAGACTTGAGCCTGAGCCAAGGGAAGGACCAGTCGGTACTGCACCGCAGTTGTTGGTGGAAACCAGGCTGAACTTGACTGTAGAAGCCGCATCCTCTTCTTCCTCAGATAACAAAACAGTTGTATCCCCGGCTTCGCGATTAAATTCGTTTAGGAAAATCTTGACGAGGGAAAGATCTTCGAACAGGATCAACCATTCTTGTCCTGACCAAGATCGTGTGGCAGATCTTGAGAGACATTGAGTCGACATATAGATACATATTATGCATATAAATCATATACACATATCGATAATCTTTAATTTATACAATATCCTCCTTTCTTTTTTACTATATCATGCTCTGTTTTTGGTTTTAGATAGTTTTGTGTAACGGAACACTAAATATATGTTAGTCAAAAGATACATCTGGTGCAG
CDS Sequence
- >AT2G42360.1
ATGAGCTCCAACGACAGAGATCATCGCAGGTTCAACTCTGACCACCACTCATTCTGGCCTAATCCGTCTACTTACGATCTTAACAGCAAGATCATGCTTGCCGCAGTGGCTTCTTTATCTGGAGTTATCCTCATCGTCTTCGCTCTTCATCTTTACGCAAGATTCGTTCTCCGACGCCGTAGAGAAGCTTTCCGTGGCCTCCCCGTCATTTTCCGCCACCCTTTTGAGATGCCTAAGCGTGGCCTCAATCCCACAGTCATCGCTTCTCTCCCTACTTTCACTGTTGGAGCCACTGATGGCGTGGCTGCCTCCGCTACTGAATGCGCAGTGTGTCTAAGCGTGTTAAAGGAGCAAGACAAGGCGAGAGAGTTGCCCAACTGCAAGCACATCTTCCACGTCGACTGTGTTGACACGTGGCTCACCACTTGCTCCACTTGTCCTGTTTGTCGGACTGAAGTTGAGCCAAGACCGAGACTTGAGCCTGAGCCAAGGGAAGGACCAGTCGGTACTGCACCGCAGTTGTTGGTGGAAACCAGGCTGAACTTGACTGTAGAAGCCGCATCCTCTTCTTCCTCAGATAACAAAACAGTTGTATCCCCGGCTTCGCGATTAAATTCGTTTAGGAAAATCTTGACGAGGGAAAGATCTTCGAACAGGATCAACCATTCTTGTCCTGACCAAGATCGTGTGGCAGATCTTGAGAGACATTGA
Protein Sequence
- >AT2G42360.1
MSSNDRDHRRFNSDHHSFWPNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVLRRRREAFRGLPVIFRHPFEMPKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPREGPVGTAPQLLVETRLNLTVEAASSSSSDNKTVVSPASRLNSFRKILTRERSSNRINHSCPDQDRVADLERH