AT2G41980

Gene Details

Gene ID: AT2G41980
Gene Symbol: SINAT1
Gene Name:
Description: Protein with RING/U-box and TRAF-like domain;(source:Araport11)
TAIR Accession: locus:2064642
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)

GO:2000785 — involved in — regulation of autophagosome assembly
GO:0005634 — located in — nucleus
GO:0006511 — involved in — ubiquitin-dependent protein catabolic process
GO:0005515 — enables — protein binding
GO:0008270 — enables — zinc ion binding
GO:0005737 — is active in — cytoplasm
GO:0061630 — enables — ubiquitin protein ligase activity

Functional Keywords

Literature and News

Gene Resources

Homologs

Sequences

cDNA Sequence

>AT2G41980.1
CTGTAATAAAAACAGAGCACCATTAATGGCTTTCATCGATACCAACAACAAGACACGACACAACTATCTCCTCCCTCTCCCTGCCGTCTTAATTCGTTTCTTCTTCTTCCTAATTCAAAGCCCATTTCTTCTTCAATCTCTTATTAATTGATATTTTCGTCTTCCTCAATCCTCATGTGAATCTGAAAGTAAAACCTCGATAACTCGAACGCCACCGCCTGCAAATTTCTCCCTGGCATTTAGAAAGGATTGTGAAGAATCGAGGGACCTGAGACGCAACAGGCTCGTGGAAAGAAAGATGTGTTGGCAACTTTCAGTTGATTGGGAATGAACTTAGTCACATTAATTCACAAGACTATCCTTTTTTCCTAACGAAGTGGCTGCTACGTTTTATATGCTTGGACCGCAACGGTATAAGACTGGATTTGCAGTATGGTGTACTGCTAAGAGATCATTGGTCCCTTTTTCCGGAAAGAAAGAAAAGAACTTGATCAAGTGCACCACAAGAACGAAGTTCCAAAGGAATATATCATCGAAAGGAGTACATCATCTGCAACAAGAGAGGACTAGGGATTTTCACTTACTTGCTGTTAGAAATAAAACAAGTTTTGGCTAGGTTTGGACTCTCTATGGCTCCTGGTGGCAGTGCATTGAAAGAAGCTCTAGAATCTAACTCGACAGGCGTAGATTATGAGGTTAAGATGGCAAAGGTTGAGGCTAATAGCAAACCAACAAAATCAGGTAGTGGCTCCATTGGAAAATTCCATTCGAGCAATGGTGTTTATGAGCTCCTTGAATGTCCGGTTTGTACAAATTTAATGTATCCTCCAATTCATCAGTGCCCGAACGGCCACACATTGTGTTCAAGCTGCAAACTGAGAGTGCAGAACACATGCCCTACATGCCGCTATGAGCTTGGTAACATAAGATGCTTGGCTCTTGAGAAGGTTGCGGAATCATTGGAAGTTCCATGCCGGTACCAAAATTTAGGGTGTCAGGACATTTTCCCATACTACAGCAAGCTCAAGCACGAGCAGCATTGCAGGTTTCGATCCTACAGCTGTCCTTATGCTGGTTCTGAGTGTTCAGTGACGGGTGATATTCCAACGCTTGTTGACCATCTCAAAGATGATCATAAAGTTGACATGCATGATGGGTGCACTTTCAACCATCGTTATGTGAAGTCAAATCCGCATGAGGTCGAGAATGCTACATGGATGCTTACGGTCTTCAACTGTTTCGGAAGACAGTTCTGCTTACACTTTGAGGCGTTTCAGCTCGGGATGGCACCAGTGTACATGGCGTTTCTAAGGTTTATGGGAGACGAGAACGAGGCTAAGAAGTTCAGTTACAGCTTGGAAGTTGGAGCTCACAGTCGTAAACTAACATGGCAAGGGATCCCAAGAAGCATCAGAGACAGTCACAGGAAAGTCCGAGATAGTCAAGACGGACTCATAATCCCTAGAAACTTGGCTTTGTACTTCTCTGGCAGTGACAAAGAAGAGCTCAAGTTGCGAGTCACTGGACGGATTTGGAAAGAAGAATAAAGCTAATGATGATGATGATGATGATGATGATGATTATGATTCATGATGCCAATGCAAAATGGGATATAAGGAGAGAAGAAAGAGAAATAAGAGTTGATTAAATTCAAACGGATGATGTACATAACAGCCTTGAGAGAGTTTCTTGATCATATGGGATGAGTTGAAATTCGAAATTTTTTCTTCAACTTTGTTTTTTTCAGTAACTATGAGATGAAAATCATCCCATGATCGGTTGAAATATTTTGTGGTTTGCAATGTTACTATCTCTATCTTGTAATCTTGGTTTTGTTGGAAAAAATGAAGACGATCTATTTTGTTCTATTCTTCGACCAAATGGTTACTTTTTTCTAAGGTTCAGATGCATATATATATATGCATGTGCATGAGTTAATCATACAGAATGATTCATCATGTATTATCCTG

CDS Sequence

>AT2G41980.1
ATGGCTCCTGGTGGCAGTGCATTGAAAGAAGCTCTAGAATCTAACTCGACAGGCGTAGATTATGAGGTTAAGATGGCAAAGGTTGAGGCTAATAGCAAACCAACAAAATCAGGTAGTGGCTCCATTGGAAAATTCCATTCGAGCAATGGTGTTTATGAGCTCCTTGAATGTCCGGTTTGTACAAATTTAATGTATCCTCCAATTCATCAGTGCCCGAACGGCCACACATTGTGTTCAAGCTGCAAACTGAGAGTGCAGAACACATGCCCTACATGCCGCTATGAGCTTGGTAACATAAGATGCTTGGCTCTTGAGAAGGTTGCGGAATCATTGGAAGTTCCATGCCGGTACCAAAATTTAGGGTGTCAGGACATTTTCCCATACTACAGCAAGCTCAAGCACGAGCAGCATTGCAGGTTTCGATCCTACAGCTGTCCTTATGCTGGTTCTGAGTGTTCAGTGACGGGTGATATTCCAACGCTTGTTGACCATCTCAAAGATGATCATAAAGTTGACATGCATGATGGGTGCACTTTCAACCATCGTTATGTGAAGTCAAATCCGCATGAGGTCGAGAATGCTACATGGATGCTTACGGTCTTCAACTGTTTCGGAAGACAGTTCTGCTTACACTTTGAGGCGTTTCAGCTCGGGATGGCACCAGTGTACATGGCGTTTCTAAGGTTTATGGGAGACGAGAACGAGGCTAAGAAGTTCAGTTACAGCTTGGAAGTTGGAGCTCACAGTCGTAAACTAACATGGCAAGGGATCCCAAGAAGCATCAGAGACAGTCACAGGAAAGTCCGAGATAGTCAAGACGGACTCATAATCCCTAGAAACTTGGCTTTGTACTTCTCTGGCAGTGACAAAGAAGAGCTCAAGTTGCGAGTCACTGGACGGATTTGGAAAGAAGAATAA

Protein Sequence

>AT2G41980.1
MAPGGSALKEALESNSTGVDYEVKMAKVEANSKPTKSGSGSIGKFHSSNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGMAPVYMAFLRFMGDENEAKKFSYSLEVGAHSRKLTWQGIPRSIRDSHRKVRDSQDGLIIPRNLALYFSGSDKEELKLRVTGRIWKEE