Information report for AT2G41940
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0000013 — cauline leaf — hoja caulinar (Spanish, exact), 茎生葉、茎葉 (Japanese, exact)
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0010026 — acts upstream of or within — trichome differentiation
- GO:0010090 — involved in — trichome morphogenesis
- GO:0005515 — enables — protein binding
- GO:0009788 — involved in — negative regulation of abscisic acid-activated signaling pathway
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0005634 — located in — nucleus
Functional Keywords
Literature and News
- Characterization of a family of Arabidopsis zinc finger protein cDNAs. DOI: 10.1007/BF00020246 ; PMID: 7599312
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: and shoot-specific genes. DOI: 10.1111/j.1365-313X.2004.02051.x ; PMID: 15078338
- Conservation, diversification and expansion of C2H2 zinc finger proteins in the Arabidopsis thaliana genome. DOI: 10.1186/1471-2164-5-39 ; PMID: 15236668
- Loss-of-function mutations in chitin responsive genes show increased susceptibility to the powdery mildew pathogen Erysiphe cichoracearum. DOI: 10.1104/pp.105.060947 ; PMID: 15923325
- Genome-wide transcriptional analysis of the Arabidopsis thaliana interaction with the plant pathogen Pseudomonas syringae pv. tomato DC3000 and the human pathogen Escherichia coli O157:H7. DOI: 10.1111/j.1365-313X.2006.02725.x ; PMID: 16553894
- Integration of cytokinin and gibberellin signalling by Arabidopsis transcription factors GIS, ZFP8 and GIS2 in the regulation of epidermal cell fate. DOI: 10.1242/dev.005017 ; PMID: 17507408
- The zinc finger network of plants. DOI: 10.1007/s00018-007-7473-4 ; PMID: 18193167
- Temporal control of trichome distribution by microRNA156-targeted SPL genes in Arabidopsis thaliana. DOI: 10.1105/tpc.109.072579 ; PMID: 20622149
- Enhanced Y1H assays for Arabidopsis. DOI: 10.1038/nmeth.1750 ; PMID: 22037706
- Zinc finger protein5 is required for the control of trichome initiation by acting upstream of zinc finger protein8 in Arabidopsis. DOI: 10.1104/pp.111.180281 ; PMID: 21803862
- ZFP5 encodes a functionally equivalent GIS protein to control trichome initiation. DOI: 10.4161/psb.7.1.18404 ; PMID: 22301962
- Zinc Finger Protein 6 (ZFP6) regulates trichome initiation by integrating gibberellin and cytokinin signaling in Arabidopsis thaliana. DOI: 10.1111/nph.12211 ; PMID: 23506479
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- GLABROUS INFLORESCENCE STEMS3 (GIS3) regulates trichome initiation and development in Arabidopsis. DOI: 10.1111/nph.13218 ; PMID: 25640859
- The novel transcription factor TRP interacts with ZFP5, a trichome initiation-related transcription factor, and negatively regulates trichome initiation through gibberellic acid signaling. DOI: 10.1007/s11103-018-0697-x ; PMID: 29335898
- Arabidopsis ZINC FINGER PROTEIN1 Acts Downstream of GL2 to Repress Root Hair Initiation and Elongation by Directly Suppressing bHLH Genes. DOI: 10.1105/tpc.19.00226 ; PMID: 31732703
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- TOE1/TOE2 Interacting with GIS to Control Trichome Development in Arabidopsis. DOI: 10.3390/ijms24076698 ; PMID: 37047669
- LEAFY and APETALA1 down-regulate ZINC FINGER PROTEIN 1 and 8 to release their repression on class B and C floral homeotic genes. DOI: 10.1073/pnas.2221181120 ; PMID: 37216511
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
- UniProt: A0A5S9X6A9
- EMBL: CACRSJ010000105, CACSHJ010000088, LR881467
- AlphaFoldDB: A0A5S9X6A9
- EnsemblPlants: AT2G41940.1
- Gramene: AT2G41940.1
- KEGG: ath:AT2G41940
- Orthologous matrix: FRTHEQE
- ExpressionAtlas: AT2G41940
- InterPro: IPR013087, IPR036236, IPR044291
- PANTHER: PTHR46547, PTHR46547:SF10
- SUPFAM: SSF57667
- PROSITE: PS00028, PS50157
- OrthoDB: A0A5S9X6A9
Homologs
- Brassica napus GSBRNA2T00132754001, GSBRNA2T00123178001, GSBRNA2T00042357001, GSBRNA2T00058378001, GSBRNA2T00019141001, GSBRNA2T00155744001
- Brassica oleracea XP_013632121.1, XP_013626546.1, XP_013602947.1
- Brassica rapa XP_009142029.1, XP_009133521.1
- Raphanus raphanistrum RrC4132_p3, RrC10966_p1
Sequences
cDNA Sequence
- >AT2G41940.1
GGATCATTCTTTAGCTATATATATATAGGTGGATAAACGTAAAATCACGCACGCGGCCATGCTGCAGGGGTTAAATAGCAATTATGTATTTACCTTAAAAAGAATTTGGGAACCTCTCTTTAAATTAATGCAAAACCTCATCTCTTGTCTTTCTGTCTCTGAAACAGTCAACCTCATTCTTCTCAAACTCACTCTCCCTGATCTCTCTCTTCCATGGACGAAACCAACGGACGAAGAGAAACTCACGATTTCATGAACGTCAACGTTGAATCCTTCTCTCAGCTTCCTTTCATCCGCCGTACTCCTCCCAAAGAAAAAGCCGCCATTATTCGTCTCTTCGGCCAAGAGCTCGTCGGTGATAACTCCGACAACTTATCCGCAGAACCTTCTGATCATCAAACCACTACCAAGAACGATGAGAGCTCTGAGAATATCAAGGACAAAGACAAAGAAAAAGATAAGGACAAAGACAAAGATAACAACAACAACAGGAGATTCGAGTGTCACTACTGCTTCAGAAACTTCCCAACTTCTCAAGCCCTAGGTGGACATCAAAACGCTCACAAACGTGAACGTCAACACGCCAAACGCGGTTCCATGACATCATACCTTCATCATCATCAGCCTCATGACCCTCACCACATCTACGGCTTCCTCAACAACCACCACCACCGTCACTATCCGTCTTGGACGACGGAAGCTAGATCATACTACGGCGGAGGGGGACATCAAACGCCGTCGTACTACTCAAGGAATACTCTTGCTCCTCCTTCTTCTAACCCACCGACAATCAACGGAAGTCCTTTAGGTTTGTGGCGTGTACCGCCTTCCACGTCAACAAATACTATTCAAGGCGTTTACTCATCTTCACCAGCTTCAGCGTTTAGGTCGCATGAGCAAGAGACTAATAAGGAGCCTAATAACTGGCCGTACAGATTGATGAAACCCAATGTGCAAGATCATGTGAGTCTCGATCTTCATCTCTGACTTCTTTTATTTTATTTTTTTATCATCCATCATTGCTGTGATATATGAGACTCGCTGATCGGTGAAGCCAATTCTTTTGAGAGTGTTGGAGACTGAAAAAAAGAAAAAGAAAACGAGAACCGGTTTGGTGTGTAGATCATCTTGAACCTTTTTGAGGTTTTCACATTCTGAGTTTATATTAATAAAGGGAATAATATTTTGGTTAATTAGTAAAATTCGTTCATCCGTTTAATTTCCTCTCACGTGTGTGTGAATGTGAATGATATAATTATCGTTTTTTTTGTTTG
CDS Sequence
- >AT2G41940.1
ATGGACGAAACCAACGGACGAAGAGAAACTCACGATTTCATGAACGTCAACGTTGAATCCTTCTCTCAGCTTCCTTTCATCCGCCGTACTCCTCCCAAAGAAAAAGCCGCCATTATTCGTCTCTTCGGCCAAGAGCTCGTCGGTGATAACTCCGACAACTTATCCGCAGAACCTTCTGATCATCAAACCACTACCAAGAACGATGAGAGCTCTGAGAATATCAAGGACAAAGACAAAGAAAAAGATAAGGACAAAGACAAAGATAACAACAACAACAGGAGATTCGAGTGTCACTACTGCTTCAGAAACTTCCCAACTTCTCAAGCCCTAGGTGGACATCAAAACGCTCACAAACGTGAACGTCAACACGCCAAACGCGGTTCCATGACATCATACCTTCATCATCATCAGCCTCATGACCCTCACCACATCTACGGCTTCCTCAACAACCACCACCACCGTCACTATCCGTCTTGGACGACGGAAGCTAGATCATACTACGGCGGAGGGGGACATCAAACGCCGTCGTACTACTCAAGGAATACTCTTGCTCCTCCTTCTTCTAACCCACCGACAATCAACGGAAGTCCTTTAGGTTTGTGGCGTGTACCGCCTTCCACGTCAACAAATACTATTCAAGGCGTTTACTCATCTTCACCAGCTTCAGCGTTTAGGTCGCATGAGCAAGAGACTAATAAGGAGCCTAATAACTGGCCGTACAGATTGATGAAACCCAATGTGCAAGATCATGTGAGTCTCGATCTTCATCTCTGA
Protein Sequence
- >AT2G41940.1
MDETNGRRETHDFMNVNVESFSQLPFIRRTPPKEKAAIIRLFGQELVGDNSDNLSAEPSDHQTTTKNDESSENIKDKDKEKDKDKDKDNNNNRRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSMTSYLHHHQPHDPHHIYGFLNNHHHRHYPSWTTEARSYYGGGGHQTPSYYSRNTLAPPSSNPPTINGSPLGLWRVPPSTSTNTIQGVYSSSPASAFRSHEQETNKEPNNWPYRLMKPNVQDHVSLDLHL