Gene Details:
- Gene ID: AT2G41530
- Gene Symbol: ATSFGH, SFGH
- Gene Name: ARABIDOPSIS THALIANA S-FORMYLGLUTATHIONE HYDROLASE, S-formylglutathione hydrolase
- Description: S-formylglutathione hydrolase;(source:Araport11)
- TAIR Accession: locus:2062729
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Gene Ontology:
- GO:1901566 — acts upstream of or within — organonitrogen compound biosynthetic process
- GO:0046294 — involved in — formaldehyde catabolic process
- GO:0009642 — acts upstream of or within — response to light intensity
- GO:0009409 — acts upstream of or within — response to cold
- GO:0018738 — enables — S-formylglutathione hydrolase activity
- GO:0048046 — located in — apoplast
- GO:0044283 — acts upstream of or within — small molecule biosynthetic process
- GO:0005829 — located in — cytosol
- GO:0043436 — acts upstream of or within — oxoacid metabolic process
- GO:0044248 — acts upstream of or within — cellular catabolic process
- GO:0005829 — is active in — cytosol
- GO:0005737 — located in — cytoplasm
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , plant sperm cell
Literature:
- Cloning and characterization of an S-formylglutathione hydrolase from Arabidopsis thaliana. DOI: 10.1006/abbi.2002.2772 ; PMID: 11888210
- A proteomic approach to apoplastic proteins involved in cell wall regeneration in protoplasts of Arabidopsis suspension-cultured cells. DOI: 10.1093/pcp/pci089 ; PMID: 15769804
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Alternative and effective proteomic analysis in Arabidopsis. DOI: 10.1002/pmic.200700346 ; PMID: 17828791
- Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. DOI: 10.1186/1471-2164-9-113 ; PMID: 18315867
- Identification of a carboxylesterase expressed in protoplasts using fluorescence-activated cell sorting. DOI: 10.1111/j.1467-7652.2007.00246.x ; PMID: 17309689
- Activity profiling reveals changes in the diversity and activity of proteins in Arabidopsis roots in response to nematode infection. DOI: 10.1016/j.plaphy.2015.09.008 ; PMID: 26408809
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Structure activity studies with xenobiotic substrates using carboxylesterases isolated from Arabidopsis thaliana. DOI: 10.1016/j.phytochem.2006.12.014 ; PMID: 17270225
- Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. DOI: 10.1016/j.phytochem.2008.04.007 ; PMID: 18538804
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Sequences:
cDNA Sequence
- >AT2G41530.1
CTTTGTACTAATGAAGTTGATTTTTACATTAAAGATGTTCATGTCACTATAATAAACCGGATTTGATTATTACATTAAGATACTCAAATCGGCCTTTCAAGACCTTTTAGTTGGGCCAGAAGTTTTAAGGAGATATGTTGTTGAATTATTTCTATGGGCTCTCTCGGATCCACTGTAGAAACCGATAGACCTCTCTCATTCGATCATTTCTTCTTCTTCTTCGTCTTCGCTGCAGCCTGCATCTGTTGTTTCTTCTAGACTTTGCAATCACAGAGATAGTGAGTGAGATAGAGAGAGTGATAATGGCGAGTGGACTAAGCGAGATCGGGAGCACGAAGATGTTCGATGGCTACAACAAAAGATACAAACACTTCAGTGAGACACTTGGATGTTCCATGACCTTTTCCATCTACTTCCCTCCTTCTGCTTCTTCTTCCCATAAATCTCCTGTGCTTTACTGGCTTTCTGGCCTCACCTGCACGGACGAGAACTTCATTATCAAATCAGGAGCTCAACGTGCTGCTTCTACTCACGGCATTGCTCTTGTTGCTCCAGACACTTCTCCAAGAGGACTAAATGTTGAAGGGGAGGCAGACAGTTACGACTTTGGTGTAGGAGCCGGATTCTACCTCAATGCTACTCAGGAAAAGTGGAAGAACTGGCGTATGTATGACTATGTTGTCAAAGAGTTGCCAAAACTCCTGAGTGAAAACTTTTCCCAGCTTGACACAACAAAAGCATCTATATCTGGACACTCCATGGGTGGACATGGAGCTCTTACTATATACCTGAGGAACCTCGATAAATACAAGTCTGTATCTGCGTTTGCACCAATCACGAATCCCATAAATTGTGCATGGGGACAGAAGGCATTCACCAATTATCTAGGTGACAACAAAGCTGCTTGGGAGGAATACGATGCCACTTGTCTTATTTCAAAGTACAACAATCTTTCTGCAACAATTCTAATTGATCAGGGAGAAAACGACCAGTTCTACCCTGATCAGTTATTGCCCAGCAAGTTTGAGGAGGCGTGCAAGAAAGTGAATGCACCGCTCTTATTGCGCCTCCATCCAGGATACGACCACTCCTACTATTTCATTGCCACCTTCATCGAAGACCACATTAGTCACCATGCTCAAGCCCTTGAGCTATAGCTCACTTCATCTGCTTGGAAACCGGCTTTGGGTTTGTCCAAGTATTAGTATCTCAATAAAGCAAGTGGACTTGTAATGTTTTATGTTCAATAACTCCCCTGTGTGCTCTTTTGTCTACGATAATAATAAGAAAATCATCTTTGCTTCATATCATACCTCATTCAACGAGACACGAGAACACATAATGTATAAGGCAAGAGTCTTTTAAATACAAAGATAGTGTCTCCTTGACCAGTCTTAGTAGGCCAAAAAAAGGGCCAATTTTGGACCACATGAAGACTCAGATAAA
CDS Sequence
- >AT2G41530.1
ATGGCGAGTGGACTAAGCGAGATCGGGAGCACGAAGATGTTCGATGGCTACAACAAAAGATACAAACACTTCAGTGAGACACTTGGATGTTCCATGACCTTTTCCATCTACTTCCCTCCTTCTGCTTCTTCTTCCCATAAATCTCCTGTGCTTTACTGGCTTTCTGGCCTCACCTGCACGGACGAGAACTTCATTATCAAATCAGGAGCTCAACGTGCTGCTTCTACTCACGGCATTGCTCTTGTTGCTCCAGACACTTCTCCAAGAGGACTAAATGTTGAAGGGGAGGCAGACAGTTACGACTTTGGTGTAGGAGCCGGATTCTACCTCAATGCTACTCAGGAAAAGTGGAAGAACTGGCGTATGTATGACTATGTTGTCAAAGAGTTGCCAAAACTCCTGAGTGAAAACTTTTCCCAGCTTGACACAACAAAAGCATCTATATCTGGACACTCCATGGGTGGACATGGAGCTCTTACTATATACCTGAGGAACCTCGATAAATACAAGTCTGTATCTGCGTTTGCACCAATCACGAATCCCATAAATTGTGCATGGGGACAGAAGGCATTCACCAATTATCTAGGTGACAACAAAGCTGCTTGGGAGGAATACGATGCCACTTGTCTTATTTCAAAGTACAACAATCTTTCTGCAACAATTCTAATTGATCAGGGAGAAAACGACCAGTTCTACCCTGATCAGTTATTGCCCAGCAAGTTTGAGGAGGCGTGCAAGAAAGTGAATGCACCGCTCTTATTGCGCCTCCATCCAGGATACGACCACTCCTACTATTTCATTGCCACCTTCATCGAAGACCACATTAGTCACCATGCTCAAGCCCTTGAGCTATAG
Protein Sequence
- >AT2G41530.1
MASGLSEIGSTKMFDGYNKRYKHFSETLGCSMTFSIYFPPSASSSHKSPVLYWLSGLTCTDENFIIKSGAQRAASTHGIALVAPDTSPRGLNVEGEADSYDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSENFSQLDTTKASISGHSMGGHGALTIYLRNLDKYKSVSAFAPITNPINCAWGQKAFTNYLGDNKAAWEEYDATCLISKYNNLSATILIDQGENDQFYPDQLLPSKFEEACKKVNAPLLLRLHPGYDHSYYFIATFIEDHISHHAQALEL