AT2G41500

Gene Details

Gene ID: AT2G41500
Gene Symbol: AtPRP4, AtSAP60, EMB2776, LIS, PRP4
Gene Name: LACHESIS, proline-rich protein 4
Description: WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-like protein;(source:Araport11)
TAIR Accession: locus:2060560
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
PO:0020090 — embryo sac central cell — célula central (Spanish, exact), 中央細胞 (Japanese, exact)
PO:0020094 — plant egg cell — female gamete (exact), megagamete (exact), oocélula (Spanish, exact), 植物卵細胞 (Japanese, exact), egg cell (broad), non-mobile gamete (broad)

GO:0001709 — acts upstream of or within — cell fate determination
GO:0080008 — part of — Cul4-RING E3 ubiquitin ligase complex
GO:0005634 — located in — nucleus
GO:0016607 — located in — nuclear speck
GO:0009560 — acts upstream of or within — embryo sac egg cell differentiation
GO:0017070 — enables — U6 snRNA binding
GO:0030621 — enables — U4 snRNA binding
GO:0000398 — acts upstream of or within — mRNA splicing, via spliceosome
GO:0009553 — acts upstream of or within — embryo sac development
GO:0046540 — part of — U4/U6 x U5 tri-snRNP complex
GO:0000398 — involved in — mRNA splicing, via spliceosome
GO:0005681 — part of — spliceosomal complex
GO:0007267 — acts upstream of or within — cell-cell signaling

SALK_070009 — Forms supernumerary egg cells. Homozygous line is lethal.
lis-1 — Forms supernumerary egg cells. Homozygous line is lethal.

Functional Keywords

Literature and News

Gene Resources

Homologs

Sequences

cDNA Sequence

>AT2G41500.2
CTCGGCTTTCTCGCATCAAATTTCCGTTTTTGCTACCGTCGTCTCTGGTCAGACTCAGAGGTTATGGGTTTTTTCTCAGGAAACACGGAGCTTGAGCAACTGACAAGACTGTTTCGTGTTTGGGGCTTTCGAAGAGAGTAACGAGATTCGCGGGTTTCGTCAATTCCTGGGTTTTCTCTAGATTGCTGTTTCGGTGGTGTTTTCTTTTGAGGATTTAAGGGAAACATGGAACCCAACAAGGATGATAATGTTTCATTAGCAGCAACAGCTCAAATTTCAGCACCTCCAGTTCTACAAGATGCCTCGTCTCTGCCAGGTTTCTCTGCCATTCCACCTGTGGTTCCTCCTTCTTTTCCCCCACCAATGGCTCCAATACCTATGATGCCACATCCTCCAGTTGCCCGCCCACCTACTTTTAGGCCACCTGTTTCACAAAATGGTGGAGTGAAAACCAGTGACTCGGATTCGGAATCAGATGATGAACATATTGAGATATCTGAAGAGAGTAAGCAGGTCAGAGAAAGACAGGAAAAGGCATTGCAAGATTTGTTGGTAAAGCGTCGTGCTGCTGCTATGGCAGTTCCAACAAATGACAAAGCTGTTAGGGACCGACTTAGACGACTTGGGGAGCCCATTACTCTATTTGGAGAACAGGAAATGGAGAGACGAGCTAGGCTGACTCAGCTGTTGACTAGGTATGATATCAATGGGCAATTGGATAAACTGGTTAAAGATCACGAAGAAGATGTGACTCCAAAAGAGGAAGTAGATGATGAAGTTCTTGAATACCCCTTTTTTACCGAGGGTCCAAAGGAACTTAGAGAGGCTAGAATAGAAATTGCCAAGTTTTCTGTCAAGAGAGCTGCTGTCAGGATTCAGCGTGCAAAGCGGCGGAGGGATGATCCAGATGAAGATATGGATGCAGAGACTAAGTGGGCTTTAAAGCATGCTAAACACATGGCCCTTGATTGCAGTAATTTTGGAGATGATCGTCCTCTTACCGGCTGCTCCTTCTCACGCGATGGAAAGATACTTGCCACATGTTCTCTGAGTGGAGTTACTAAATTGTGGGAGATGCCTCAAGTTACAAACACGATTGCTGTCTTGAAGGATCACAAAGAACGTGCAACTGATGTAGTGTTCTCCCCAGTGGATGATTGTCTAGCGACTGCTTCTGCTGATCGAACTGCAAAGCTGTGGAAAACTGATGGAACACTCCTACAAACGTTTGAAGGTCATTTGGATCGTCTGGCACGTGTTGCTTTCCACCCATCAGGGAAATACCTGGGAACTACAAGCTATGACAAGACGTGGAGATTGTGGGATATAAACACAGGAGCAGAACTGCTTTTGCAAGAAGGCCATAGCCGCAGTGTCTACGGAATTGCATTTCAACAAGATGGAGCATTAGCAGCTTCTTGTGGGCTTGATTCACTCGCACGAGTTTGGGATCTCCGCACTGGTAGGAGTATTCTTGTCTTCCAAGGACACATCAAACCGGTTTTCTCCGTGAATTTCTCTCCTAATGGTTATCACTTGGCATCTGGTGGGGAGGATAATCAATGCCGTATTTGGGATCTAAGAATGAGAAAGTCATTGTACATTATACCAGCTCATGCTAACCTTGTGTCTCAAGTGAAGTATGAGCCACAAGAAGGCTACTTTCTGGCCACTGCCTCATACGACATGAAAGTCAATATATGGTCAGGAAGAGATTTCTCGCTCGTTAAAAGCTTAGCAGGGCATGAGTCAAAAGTCGCCTCTCTAGATATCACAGCAGATAGCTCGTGTATCGCTACTGTATCACATGATCGCACCATCAAGCTATGGACAAGCAGTGGAAATGATGATGAAGACGAAGAGAAAGAAACAATGGACATAGATCTCTAG
>AT2G41500.1
CTCGGCTTTCTCGCATCAAATTTCCGTTTTTGCTACCGTCGTCTCTGGTCAGACTCAGAGGTTATGGGTTTTTTCTCAGGAAACACGGAGCTTGAGCAACTGACAAGACTGTTTCGTGTTTGGGGCTTTCGAAGAGAGTAACGAGATTCGCGGGTTTCGTCAATTCCTGGGTTTTCTCTAGATTGCTGTTTCGGTGGTGTTTTCTTTTGAGGATTTAAGGGAAACATGGAACCCAACAAGGATGATAATGTTTCATTAGCAGCAACAGCTCAAATTTCAGCACCTCCAGTTCTACAAGATGCCTCGTCTCTGCCAGGTTTCTCTGCCATTCCACCTGTGGTTCCTCCTTCTTTTCCCCCACCAATGGCTCCAATACCTATGATGCCACATCCTCCAGTTGCCCGCCCACCTACTTTTAGGCCACCTGTTTCACAAAATGGTGGAGTGAAAACCAGTGACTCGGATTCGGAATCAGATGATGAACATATTGAGATATCTGAAGAGAGTAAGCAGGTCAGAGAAAGACAGGAAAAGGCATTGCAAGATTTGTTGGTAAAGCGTCGTGCTGCTGCTATGGCAGTTCCAACAAATGACAAAGCTGTTAGGGACCGACTTAGACGACTTGGGGAGCCCATTACTCTATTTGGAGAACAGGAAATGGAGAGACGAGCTAGGCTGACTCAGCTGTTGACTAGGTATGATATCAATGGGCAATTGGATAAACTGGTTAAAGATCACGAAGAAGATGTGACTCCAAAAGAGGAAGTAGATGATGAAGTTCTTGAATACCCCTTTTTTACCGAGGGTCCAAAGGAACTTAGAGAGGCTAGAATAGAAATTGCCAAGTTTTCTGTCAAGAGAGCTGCTGTCAGGATTCAGCGTGCAAAGCGGCGGAGGGATGATCCAGATGAAGATATGGATGCAGAGACTAAGTGGGCTTTAAAGCATGCTAAACACATGGCCCTTGATTGCAGTAATTTTGGAGATGATCGTCCTCTTACCGGCTGCTCCTTCTCACGCGATGGAAAGATACTTGCCACATGTTCTCTGAGTGGAGTTACTAAATTGTGGGAGATGCCTCAAGTTACAAACACGATTGCTGTCTTGAAGGATCACAAAGAACGTGCAACTGATGTAGTGTTCTCCCCAGTGGATGATTGTCTAGCGACTGCTTCTGCTGATCGAACTGCAAAGCTGTGGAAAACTGATGGAACACTCCTACAAACGTTTGAAGGTCATTTGGATCGTCTGGCACGTGTTGCTTTCCACCCATCAGGGAAATACCTGGGAACTACAAGCTATGACAAGACGTGGAGATTGTGGGATATAAACACAGGAGCAGAACTGCTTTTGCAAGAAGGCCATAGCCGCAGTGTCTACGGAATTGCATTTCAACAAGATGGAGCATTAGCAGCTTCTTGTGGGCTTGATTCACTCGCACGAGTTTGGGATCTCCGCACTGGTAGGAGTATTCTTGTCTTCCAAGGACACATCAAACCGGTTTTCTCCGTGAATTTCTCTCCTAATGGTTATCACTTGGCATCTGGTGGGGAGGATAATCAATGCCGTATTTGGGATCTAAGAATGAGAAAGTCATTGTACATTATACCAGCTCATGCTAACCTTGTGTCTCAAGTGAAGTATGAGCCACAAGAAGGCTACTTTCTGGCCACTGCCTCATACGACATGAAAGTCAATATATGGTCAGGAAGAGATTTCTCGCTCGTTAAAAGCTTAGCAGGGCATGAGTCAAAAGTCGCCTCTCTAGATATCACAGCAGATAGCTCGTGTATCGCTACTGTATCACATGATCGCACCATCAAGCTATGGACAAGCAGTGGAAATGATGATGAAGACGAAGAGAAAGAAACAATGGACATAGATCTCTAG

CDS Sequence

>AT2G41500.2
ATGGAACCCAACAAGGATGATAATGTTTCATTAGCAGCAACAGCTCAAATTTCAGCACCTCCAGTTCTACAAGATGCCTCGTCTCTGCCAGGTTTCTCTGCCATTCCACCTGTGGTTCCTCCTTCTTTTCCCCCACCAATGGCTCCAATACCTATGATGCCACATCCTCCAGTTGCCCGCCCACCTACTTTTAGGCCACCTGTTTCACAAAATGGTGGAGTGAAAACCAGTGACTCGGATTCGGAATCAGATGATGAACATATTGAGATATCTGAAGAGAGTAAGCAGGTCAGAGAAAGACAGGAAAAGGCATTGCAAGATTTGTTGGTAAAGCGTCGTGCTGCTGCTATGGCAGTTCCAACAAATGACAAAGCTGTTAGGGACCGACTTAGACGACTTGGGGAGCCCATTACTCTATTTGGAGAACAGGAAATGGAGAGACGAGCTAGGCTGACTCAGCTGTTGACTAGGTATGATATCAATGGGCAATTGGATAAACTGGTTAAAGATCACGAAGAAGATGTGACTCCAAAAGAGGAAGTAGATGATGAAGTTCTTGAATACCCCTTTTTTACCGAGGGTCCAAAGGAACTTAGAGAGGCTAGAATAGAAATTGCCAAGTTTTCTGTCAAGAGAGCTGCTGTCAGGATTCAGCGTGCAAAGCGGCGGAGGGATGATCCAGATGAAGATATGGATGCAGAGACTAAGTGGGCTTTAAAGCATGCTAAACACATGGCCCTTGATTGCAGTAATTTTGGAGATGATCGTCCTCTTACCGGCTGCTCCTTCTCACGCGATGGAAAGATACTTGCCACATGTTCTCTGAGTGGAGTTACTAAATTGTGGGAGATGCCTCAAGTTACAAACACGATTGCTGTCTTGAAGGATCACAAAGAACGTGCAACTGATGTAGTGTTCTCCCCAGTGGATGATTGTCTAGCGACTGCTTCTGCTGATCGAACTGCAAAGCTGTGGAAAACTGATGGAACACTCCTACAAACGTTTGAAGGTCATTTGGATCGTCTGGCACGTGTTGCTTTCCACCCATCAGGGAAATACCTGGGAACTACAAGCTATGACAAGACGTGGAGATTGTGGGATATAAACACAGGAGCAGAACTGCTTTTGCAAGAAGGCCATAGCCGCAGTGTCTACGGAATTGCATTTCAACAAGATGGAGCATTAGCAGCTTCTTGTGGGCTTGATTCACTCGCACGAGTTTGGGATCTCCGCACTGGTAGGAGTATTCTTGTCTTCCAAGGACACATCAAACCGGTTTTCTCCGTGAATTTCTCTCCTAATGGTTATCACTTGGCATCTGGTGGGGAGGATAATCAATGCCGTATTTGGGATCTAAGAATGAGAAAGTCATTGTACATTATACCAGCTCATGCTAACCTTGTGTCTCAAGTGAAGTATGAGCCACAAGAAGGCTACTTTCTGGCCACTGCCTCATACGACATGAAAGTCAATATATGGTCAGGAAGAGATTTCTCGCTCGTTAAAAGCTTAGCAGGGCATGAGTCAAAAGTCGCCTCTCTAGATATCACAGCAGATAGCTCGTGTATCGCTACTGTATCACATGATCGCACCATCAAGCTATGGACAAGCAGTGGAAATGATGATGAAGACGAAGAGAAAGAAACAATGGACATAGATCTCTAG
>AT2G41500.1
ATGGAACCCAACAAGGATGATAATGTTTCATTAGCAGCAACAGCTCAAATTTCAGCACCTCCAGTTCTACAAGATGCCTCGTCTCTGCCAGGTTTCTCTGCCATTCCACCTGTGGTTCCTCCTTCTTTTCCCCCACCAATGGCTCCAATACCTATGATGCCACATCCTCCAGTTGCCCGCCCACCTACTTTTAGGCCACCTGTTTCACAAAATGGTGGAGTGAAAACCAGTGACTCGGATTCGGAATCAGATGATGAACATATTGAGATATCTGAAGAGAGTAAGCAGGTCAGAGAAAGACAGGAAAAGGCATTGCAAGATTTGTTGGTAAAGCGTCGTGCTGCTGCTATGGCAGTTCCAACAAATGACAAAGCTGTTAGGGACCGACTTAGACGACTTGGGGAGCCCATTACTCTATTTGGAGAACAGGAAATGGAGAGACGAGCTAGGCTGACTCAGCTGTTGACTAGGTATGATATCAATGGGCAATTGGATAAACTGGTTAAAGATCACGAAGAAGATGTGACTCCAAAAGAGGAAGTAGATGATGAAGTTCTTGAATACCCCTTTTTTACCGAGGGTCCAAAGGAACTTAGAGAGGCTAGAATAGAAATTGCCAAGTTTTCTGTCAAGAGAGCTGCTGTCAGGATTCAGCGTGCAAAGCGGCGGAGGGATGATCCAGATGAAGATATGGATGCAGAGACTAAGTGGGCTTTAAAGCATGCTAAACACATGGCCCTTGATTGCAGTAATTTTGGAGATGATCGTCCTCTTACCGGCTGCTCCTTCTCACGCGATGGAAAGATACTTGCCACATGTTCTCTGAGTGGAGTTACTAAATTGTGGGAGATGCCTCAAGTTACAAACACGATTGCTGTCTTGAAGGATCACAAAGAACGTGCAACTGATGTAGTGTTCTCCCCAGTGGATGATTGTCTAGCGACTGCTTCTGCTGATCGAACTGCAAAGCTGTGGAAAACTGATGGAACACTCCTACAAACGTTTGAAGGTCATTTGGATCGTCTGGCACGTGTTGCTTTCCACCCATCAGGGAAATACCTGGGAACTACAAGCTATGACAAGACGTGGAGATTGTGGGATATAAACACAGGAGCAGAACTGCTTTTGCAAGAAGGCCATAGCCGCAGTGTCTACGGAATTGCATTTCAACAAGATGGAGCATTAGCAGCTTCTTGTGGGCTTGATTCACTCGCACGAGTTTGGGATCTCCGCACTGGTAGGAGTATTCTTGTCTTCCAAGGACACATCAAACCGGTTTTCTCCGTGAATTTCTCTCCTAATGGTTATCACTTGGCATCTGGTGGGGAGGATAATCAATGCCGTATTTGGGATCTAAGAATGAGAAAGTCATTGTACATTATACCAGCTCATGCTAACCTTGTGTCTCAAGTGAAGTATGAGCCACAAGAAGGCTACTTTCTGGCCACTGCCTCATACGACATGAAAGTCAATATATGGTCAGGAAGAGATTTCTCGCTCGTTAAAAGCTTAGCAGGGCATGAGTCAAAAGTCGCCTCTCTAGATATCACAGCAGATAGCTCGTGTATCGCTACTGTATCACATGATCGCACCATCAAGCTATGGACAAGCAGTGGAAATGATGATGAAGACGAAGAGAAAGAAACAATGGACATAGATCTCTAG

Protein Sequence

>AT2G41500.2
MEPNKDDNVSLAATAQISAPPVLQDASSLPGFSAIPPVVPPSFPPPMAPIPMMPHPPVARPPTFRPPVSQNGGVKTSDSDSESDDEHIEISEESKQVRERQEKALQDLLVKRRAAAMAVPTNDKAVRDRLRRLGEPITLFGEQEMERRARLTQLLTRYDINGQLDKLVKDHEEDVTPKEEVDDEVLEYPFFTEGPKELREARIEIAKFSVKRAAVRIQRAKRRRDDPDEDMDAETKWALKHAKHMALDCSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGNDDEDEEKETMDIDL
>AT2G41500.1
MEPNKDDNVSLAATAQISAPPVLQDASSLPGFSAIPPVVPPSFPPPMAPIPMMPHPPVARPPTFRPPVSQNGGVKTSDSDSESDDEHIEISEESKQVRERQEKALQDLLVKRRAAAMAVPTNDKAVRDRLRRLGEPITLFGEQEMERRARLTQLLTRYDINGQLDKLVKDHEEDVTPKEEVDDEVLEYPFFTEGPKELREARIEIAKFSVKRAAVRIQRAKRRRDDPDEDMDAETKWALKHAKHMALDCSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGNDDEDEEKETMDIDL