Information report for AT2G41130
Gene Details
|
|
Functional Descriptions
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. DOI: 10.1093/molbev/msg088 ; PMID: 12679534
- The Arabidopsis basic/helix-loop-helix transcription factor family. DOI: 10.1105/tpc.013839 ; PMID: 12897250
- Update on the basic helix-loop-helix transcription factor gene family in Arabidopsis thaliana. DOI: 10.1105/tpc.151140 ; PMID: 14600211
- Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature. DOI: 10.1016/j.diff.2010.02.003 ; PMID: 20219281
- bHLH106 Integrates Functions of Multiple Genes through Their G-Box to Confer Salt Tolerance on Arabidopsis. DOI: 10.1371/journal.pone.0126872 ; PMID: 25978450
- The G-Box Transcriptional Regulatory Code in Arabidopsis. DOI: 10.1104/pp.17.01086 ; PMID: 28864470
- Reverse Chromatin Immunoprecipitation (R-ChIP) enables investigation of the upstream regulators of plant genes. DOI: 10.1038/s42003-020-01500-4 ; PMID: 33318632
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The basic helix-loop-helix transcription factor family in plants: a genome-wide study of protein structure and functional diversity. DOI: 10.1093/molbev/msg088 ; PMID: 12679534
- Proteomic study of the Arabidopsis thaliana chloroplastic envelope membrane utilizing alternatives to traditional two-dimensional electrophoresis. DOI: 10.1021/pr034025j ; PMID: 12938931
Gene Resources
- UniProt: A0A178VRM6
- EMBL: CACSHJ010000088, LR881467, LUHQ01000002
- AlphaFoldDB: A0A178VRM6
- EnsemblPlants: AT2G41130.1
- Gramene: AT2G41130.1
- KEGG: ath:AT2G41130
- Orthologous matrix: YSFLAGN
- ExpressionAtlas: AT2G41130
- InterPro: IPR011598, IPR036638, IPR045847
- PANTHER: PTHR45844, PTHR45844:SF19
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- OrthoDB: A0A178VRM6
- SWISS-MODEL: A0A178VRM6
Homologs
- Brassica napus GSBRNA2T00132819001, GSBRNA2T00123248001, GSBRNA2T00022391001, GSBRNA2T00019074001, GSBRNA2T00024307001
- Brassica oleracea XP_013634229.1, XP_013633940.1
- Brassica rapa XP_009142723.1, XP_009141971.1
- Raphanus raphanistrum RrC19206_p1, RrC26490_p1, RrC1406_p1, RrC17085_p1
Sequences
cDNA Sequence
- >AT2G41130.1
ACTTTTTCCCCACCAATATATATATAAATACAAAAATCAAGTATTTAACATCTAAAATAAAAAAAATAAAAAAAATAATCTACACTCTCTACCCTCTCATTTCACGTATATATAATCCATCTTTTAGGACAGAACCCACCGAAAGCTCCACAAACCCCATTAATTAACAAAAAACCAAAAGAAGGCGGCGCAAACAAAAGATAATGCAACCAGAGACCTCAGATCAGATGTTGTACTCGTTTCTTGCCGGAAACGAAGTCGGCGGTGGAGGGTACTGCGTCTCCGGCGACTACATGACGACTATGCAGAGCTTATGTGGGTCTTCGTCGTCGACGTCATCGTATTACCCACTGGCGATCTCCGGCATCGGAGAAACGATGGCTCAAGACAGAGCTTTAGCTGCTTTGAGGAACCACAAAGAAGCTGAGAGAAGAAGGAGAGAGAGGATCAATTCTCATCTCAACAAGCTTCGTAACGTACTCTCTTGTAATTCTAAGACCGATAAAGCCACACTGCTCGCCAAAGTAGTTCAACGAGTCAGAGAACTTAAACAGCAAACCCTAGAGACCTCCGACTCCGACCAAACATTATTACCATCAGAGACCGACGAAATTAGTGTTCTACACTTTGGAGACTATTCAAACGACGGTCATATAATCTTCAAAGCCTCTCTATGTTGTGAAGATAGATCAGATCTCTTGCCGGACCTTATGGAGATTCTCAAGTCTCTTAACATGAAGACTCTCCGAGCTGAGATGGTAACCATTGGTGGTCGGACAAGAAGTGTTCTTGTCGTAGCTGCTGACAAAGAGATGCACGGCGTCGAGTCTGTGCATTTTTTGCAAAATGCTCTCAAGTCGCTGCTTGAGCGGTCAAGCAAGTCGTTGATGGAACGTAGTTCTGGTGGTGGAGGAGGAGAACGGTCAAAGCGGCGTCGTGCGCTGGATCACATCATAATGGTGTGAAATGATGAGAATTGAGCACACTAAAAAGTCTATAATTGATTAATATATATAGGGTATGATCATAATTAACTTGGTTATAATTACCAAAACCTTTTTTATTCCTCTTTAATAATATATATGTTATATGGTTTTAGTTACTAAGTCTTGGGAGTGTAAGCAAATGTTGTAAGTAGGTTTGGTGTGTTCTTTTTCTTTTCTTTTTTTTTTCTTTTTCAAGAAAAAGAAAAAGATCTATATTATATATAAAGAATATTTGTCATGTTATTTTCCTCTATTTATATATATCTTTTTGGTTGTTGGTGTGATGACTAGGGTTTTGAGATTGTGGGAATATTTGTCGACGTAGAAGAATCTAAGTAACAGATGTGATTGGTGAAGTCCAAAAGAAACTAGGGTACTTCGATTTACATATACACACTATACATGTGAATATATATGTATATATAGTGAAGAGAAGGTCTATGTTTGTATGCTGTGAGTTTCAAAGCGACCCTTATGTCACCTTTGTCCCCAAATGAATCCAAACTCTCCTATCTCTTTCTTTGTTCATGTCTTTCTAAATGTGTACATTTGACCACATTTTTCAGACCAAAGAAT
CDS Sequence
- >AT2G41130.1
ATGCAACCAGAGACCTCAGATCAGATGTTGTACTCGTTTCTTGCCGGAAACGAAGTCGGCGGTGGAGGGTACTGCGTCTCCGGCGACTACATGACGACTATGCAGAGCTTATGTGGGTCTTCGTCGTCGACGTCATCGTATTACCCACTGGCGATCTCCGGCATCGGAGAAACGATGGCTCAAGACAGAGCTTTAGCTGCTTTGAGGAACCACAAAGAAGCTGAGAGAAGAAGGAGAGAGAGGATCAATTCTCATCTCAACAAGCTTCGTAACGTACTCTCTTGTAATTCTAAGACCGATAAAGCCACACTGCTCGCCAAAGTAGTTCAACGAGTCAGAGAACTTAAACAGCAAACCCTAGAGACCTCCGACTCCGACCAAACATTATTACCATCAGAGACCGACGAAATTAGTGTTCTACACTTTGGAGACTATTCAAACGACGGTCATATAATCTTCAAAGCCTCTCTATGTTGTGAAGATAGATCAGATCTCTTGCCGGACCTTATGGAGATTCTCAAGTCTCTTAACATGAAGACTCTCCGAGCTGAGATGGTAACCATTGGTGGTCGGACAAGAAGTGTTCTTGTCGTAGCTGCTGACAAAGAGATGCACGGCGTCGAGTCTGTGCATTTTTTGCAAAATGCTCTCAAGTCGCTGCTTGAGCGGTCAAGCAAGTCGTTGATGGAACGTAGTTCTGGTGGTGGAGGAGGAGAACGGTCAAAGCGGCGTCGTGCGCTGGATCACATCATAATGGTGTGA
Protein Sequence
- >AT2G41130.1
MQPETSDQMLYSFLAGNEVGGGGYCVSGDYMTTMQSLCGSSSSTSSYYPLAISGIGETMAQDRALAALRNHKEAERRRRERINSHLNKLRNVLSCNSKTDKATLLAKVVQRVRELKQQTLETSDSDQTLLPSETDEISVLHFGDYSNDGHIIFKASLCCEDRSDLLPDLMEILKSLNMKTLRAEMVTIGGRTRSVLVVAADKEMHGVESVHFLQNALKSLLERSSKSLMERSSGGGGGERSKRRRALDHIIMV