Gene Details:
- Gene ID: AT2G40970
- Gene Symbol: MYBC1
- Gene Name:
- Description: Homeodomain-like superfamily protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Germplasm Phenotype:
- mybc1 — The mutant plants exhibited increased tolerance to freezing.
Function-related keywords:
- shoot axis apex , root , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- LUX ARRHYTHMO encodes a Myb domain protein essential for circadian rhythms. DOI: 10.1073/pnas.0503029102 ; PMID: 16006522
- Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7(ARR7) overexpression in cytokinin response. DOI: 10.1007/s00438-006-0177-x ; PMID: 17061125
- Arabidopsis ESK1 encodes a novel regulator of freezing tolerance. DOI: 10.1111/j.1365-313X.2006.02994.x ; PMID: 17316173
- The DOF transcription factor OBP1 is involved in cell cycle regulation in Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2008.03641.x ; PMID: 18665917
- Genome-wide identification of osmotic stress response gene in Arabidopsis thaliana. DOI: 10.1016/j.ygeno.2008.08.011 ; PMID: 18804526
- A single-repeat R3-MYB transcription factor MYBC1 negatively regulates freezing tolerance in Arabidopsis. DOI: 10.1016/j.bbrc.2010.03.114 ; PMID: 20331973
- Cytokinins secreted by Agrobacterium promote transformation by repressing a plant myb transcription factor. DOI: 10.1126/scisignal.2004518 ; PMID: 24255177
- The Arabidopsis Myb transcription factor MTF1 is a unidirectional regulator of susceptibility to Agrobacterium. DOI: 10.4161/psb.28983 ; PMID: 24785741
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Sequences:
cDNA Sequence
- >AT2G40970.1
CTCAACAATTTATTCCGTGTTCCATAACCCCATGAACACATTATTCGAGAGAAATGGAATCAGCCAATCACTCTCTTTCCTCCATATATAAAATCTAGCCAATATTCACAAATAATAACTACTTCCTTCGTTCTTTTCCTTACCAAAAGATCCACCTCGAACCTCTCTCCTCCGTCTTCCTCCGCAGCCGCCGTCACTATCACCGCAGCTAGAATGAGAGAAGATAATCCAAATTGGTTCCTTAGATGGGAAGAAGAGCTTCCATCTCCAGAAGAACTCATCCCTATCTCTCAAACCTTAATCACTCCTCATCTAGCTCTCGCTTTCCAAATCGGAAGTCCTAATCATCATCTCGGATCAAAGAGAACCACCGCGATTTATCACCAGAAGCTTCAATCCTCCACCACTCCAACAACTCCAACTCCAACTCCTCCACCGATGATGATGAATTCTGATTTCGGCGGTGGCGATTCCACGGATCTTGGTTCAGGATCAATAGGAGGAGAGCCAGCAAGAACGTTGAAACGGCCGCGTCTAGTGTGGACGCCTCAGCTACACAAACGTTTCGTGGATGCGGTTGGACACTTAGGGATCAAAAACGCAGTTCCAAAGACTATAATGCAGCTTATGAGCGTTGAAGGATTGACTAGAGAGAACGTTGCGAGTCATCTTCAGAAATATCGTCTTTACCTTAGGAGAATGCAAGGCGGGAACGGTAACGGAATCACTGGAGGACACGTCATCGTCTCTGATTCGGCTACTGATCGGCTATTTGCTAGCTCACCGGTTCCAGCTCATTTCTTGAGCCCGGATTACTTGATGCCGCCATTAGAGCATTCGTATATGGGGAAACATGTGATTACGCAGCAAAACCAAGTGGTTCGTAATCTGAGGTATGAAGATTCGGAATATGGTCATGGTAGTATGAAGATGCTTAAGCTCTTCCCTGCCGGAAATTAATGAAATATTTGAATTCTTAACTTCATTTTTATGGAAGTAATAATGTTTAAGGTATGTGGATTATCTCTGTAATTTGCATTTGTCGTCAGGATCAATAATCTATTGTTAGTGTATATTATTTGTTACGCGAACAATTTAACCTTTGTATGATGTTATCATTTGAATTCACTACAACACAGTAGCTTGTTTTTATTTCTTTCGTCTATTCATTAGTTTCCCTGG
CDS Sequence
- >AT2G40970.1
ATGAGAGAAGATAATCCAAATTGGTTCCTTAGATGGGAAGAAGAGCTTCCATCTCCAGAAGAACTCATCCCTATCTCTCAAACCTTAATCACTCCTCATCTAGCTCTCGCTTTCCAAATCGGAAGTCCTAATCATCATCTCGGATCAAAGAGAACCACCGCGATTTATCACCAGAAGCTTCAATCCTCCACCACTCCAACAACTCCAACTCCAACTCCTCCACCGATGATGATGAATTCTGATTTCGGCGGTGGCGATTCCACGGATCTTGGTTCAGGATCAATAGGAGGAGAGCCAGCAAGAACGTTGAAACGGCCGCGTCTAGTGTGGACGCCTCAGCTACACAAACGTTTCGTGGATGCGGTTGGACACTTAGGGATCAAAAACGCAGTTCCAAAGACTATAATGCAGCTTATGAGCGTTGAAGGATTGACTAGAGAGAACGTTGCGAGTCATCTTCAGAAATATCGTCTTTACCTTAGGAGAATGCAAGGCGGGAACGGTAACGGAATCACTGGAGGACACGTCATCGTCTCTGATTCGGCTACTGATCGGCTATTTGCTAGCTCACCGGTTCCAGCTCATTTCTTGAGCCCGGATTACTTGATGCCGCCATTAGAGCATTCGTATATGGGGAAACATGTGATTACGCAGCAAAACCAAGTGGTTCGTAATCTGAGGTATGAAGATTCGGAATATGGTCATGGTAGTATGAAGATGCTTAAGCTCTTCCCTGCCGGAAATTAA
Protein Sequence
- >AT2G40970.1
MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKLQSSTTPTTPTPTPPPMMMNSDFGGGDSTDLGSGSIGGEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQGGNGNGITGGHVIVSDSATDRLFASSPVPAHFLSPDYLMPPLEHSYMGKHVITQQNQVVRNLRYEDSEYGHGSMKMLKLFPAGN