Information report for AT2G40970
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- mybc1 — The mutant plants exhibited increased tolerance to freezing.
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- LUX ARRHYTHMO encodes a Myb domain protein essential for circadian rhythms. DOI: 10.1073/pnas.0503029102 ; PMID: 16006522
- Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7(ARR7) overexpression in cytokinin response. DOI: 10.1007/s00438-006-0177-x ; PMID: 17061125
- Arabidopsis ESK1 encodes a novel regulator of freezing tolerance. DOI: 10.1111/j.1365-313X.2006.02994.x ; PMID: 17316173
- The DOF transcription factor OBP1 is involved in cell cycle regulation in Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2008.03641.x ; PMID: 18665917
- Genome-wide identification of osmotic stress response gene in Arabidopsis thaliana. DOI: 10.1016/j.ygeno.2008.08.011 ; PMID: 18804526
- A single-repeat R3-MYB transcription factor MYBC1 negatively regulates freezing tolerance in Arabidopsis. DOI: 10.1016/j.bbrc.2010.03.114 ; PMID: 20331973
- Cytokinins secreted by Agrobacterium promote transformation by repressing a plant myb transcription factor. DOI: 10.1126/scisignal.2004518 ; PMID: 24255177
- The Arabidopsis Myb transcription factor MTF1 is a unidirectional regulator of susceptibility to Agrobacterium. DOI: 10.4161/psb.28983 ; PMID: 24785741
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
- UniProt: A0A178VYV1
- EMBL: CACRSJ010000105, CACSHJ010000088, LR881467
- AlphaFoldDB: A0A178VYV1
- EnsemblPlants: AT2G40970.1
- Gramene: AT2G40970.1
- KEGG: ath:AT2G40970
- Orthologous matrix: MMNSDFG
- ExpressionAtlas: AT2G40970
- InterPro: IPR001005, IPR006447, IPR009057
- PANTHER: PTHR31442, PTHR31442:SF30
- SUPFAM: SSF46689
- PROSITE: PS51294
- Gene3D: 1.10.10.60
- OrthoDB: A0A178VYV1
- SWISS-MODEL: A0A178VYV1
Homologs
- Brassica napus GSBRNA2T00132825001, GSBRNA2T00011219001
- Brassica oleracea XP_013634583.1
- Brassica rapa XP_009142716.1
- Raphanus raphanistrum RrC11530_p1
Sequences
cDNA Sequence
- >AT2G40970.1
CTCAACAATTTATTCCGTGTTCCATAACCCCATGAACACATTATTCGAGAGAAATGGAATCAGCCAATCACTCTCTTTCCTCCATATATAAAATCTAGCCAATATTCACAAATAATAACTACTTCCTTCGTTCTTTTCCTTACCAAAAGATCCACCTCGAACCTCTCTCCTCCGTCTTCCTCCGCAGCCGCCGTCACTATCACCGCAGCTAGAATGAGAGAAGATAATCCAAATTGGTTCCTTAGATGGGAAGAAGAGCTTCCATCTCCAGAAGAACTCATCCCTATCTCTCAAACCTTAATCACTCCTCATCTAGCTCTCGCTTTCCAAATCGGAAGTCCTAATCATCATCTCGGATCAAAGAGAACCACCGCGATTTATCACCAGAAGCTTCAATCCTCCACCACTCCAACAACTCCAACTCCAACTCCTCCACCGATGATGATGAATTCTGATTTCGGCGGTGGCGATTCCACGGATCTTGGTTCAGGATCAATAGGAGGAGAGCCAGCAAGAACGTTGAAACGGCCGCGTCTAGTGTGGACGCCTCAGCTACACAAACGTTTCGTGGATGCGGTTGGACACTTAGGGATCAAAAACGCAGTTCCAAAGACTATAATGCAGCTTATGAGCGTTGAAGGATTGACTAGAGAGAACGTTGCGAGTCATCTTCAGAAATATCGTCTTTACCTTAGGAGAATGCAAGGCGGGAACGGTAACGGAATCACTGGAGGACACGTCATCGTCTCTGATTCGGCTACTGATCGGCTATTTGCTAGCTCACCGGTTCCAGCTCATTTCTTGAGCCCGGATTACTTGATGCCGCCATTAGAGCATTCGTATATGGGGAAACATGTGATTACGCAGCAAAACCAAGTGGTTCGTAATCTGAGGTATGAAGATTCGGAATATGGTCATGGTAGTATGAAGATGCTTAAGCTCTTCCCTGCCGGAAATTAATGAAATATTTGAATTCTTAACTTCATTTTTATGGAAGTAATAATGTTTAAGGTATGTGGATTATCTCTGTAATTTGCATTTGTCGTCAGGATCAATAATCTATTGTTAGTGTATATTATTTGTTACGCGAACAATTTAACCTTTGTATGATGTTATCATTTGAATTCACTACAACACAGTAGCTTGTTTTTATTTCTTTCGTCTATTCATTAGTTTCCCTGG
CDS Sequence
- >AT2G40970.1
ATGAGAGAAGATAATCCAAATTGGTTCCTTAGATGGGAAGAAGAGCTTCCATCTCCAGAAGAACTCATCCCTATCTCTCAAACCTTAATCACTCCTCATCTAGCTCTCGCTTTCCAAATCGGAAGTCCTAATCATCATCTCGGATCAAAGAGAACCACCGCGATTTATCACCAGAAGCTTCAATCCTCCACCACTCCAACAACTCCAACTCCAACTCCTCCACCGATGATGATGAATTCTGATTTCGGCGGTGGCGATTCCACGGATCTTGGTTCAGGATCAATAGGAGGAGAGCCAGCAAGAACGTTGAAACGGCCGCGTCTAGTGTGGACGCCTCAGCTACACAAACGTTTCGTGGATGCGGTTGGACACTTAGGGATCAAAAACGCAGTTCCAAAGACTATAATGCAGCTTATGAGCGTTGAAGGATTGACTAGAGAGAACGTTGCGAGTCATCTTCAGAAATATCGTCTTTACCTTAGGAGAATGCAAGGCGGGAACGGTAACGGAATCACTGGAGGACACGTCATCGTCTCTGATTCGGCTACTGATCGGCTATTTGCTAGCTCACCGGTTCCAGCTCATTTCTTGAGCCCGGATTACTTGATGCCGCCATTAGAGCATTCGTATATGGGGAAACATGTGATTACGCAGCAAAACCAAGTGGTTCGTAATCTGAGGTATGAAGATTCGGAATATGGTCATGGTAGTATGAAGATGCTTAAGCTCTTCCCTGCCGGAAATTAA
Protein Sequence
- >AT2G40970.1
MREDNPNWFLRWEEELPSPEELIPISQTLITPHLALAFQIGSPNHHLGSKRTTAIYHQKLQSSTTPTTPTPTPPPMMMNSDFGGGDSTDLGSGSIGGEPARTLKRPRLVWTPQLHKRFVDAVGHLGIKNAVPKTIMQLMSVEGLTRENVASHLQKYRLYLRRMQGGNGNGITGGHVIVSDSATDRLFASSPVPAHFLSPDYLMPPLEHSYMGKHVITQQNQVVRNLRYEDSEYGHGSMKMLKLFPAGN