Information report for AT2G40900
Gene Details
|
|
Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- umamit11 — Significantly elevated levels of amino acids in the seeds. Reduced seed volume.
Functional Keywords
- shoot axis apex , root , vascular leaf , stamen , sepal , flower , hypocotyl , leaf apex , collective leaf structure , pollen
Literature and News
- Transcriptome changes for Arabidopsis in response to salt, osmotic, and cold stress. DOI: 10.1104/pp.008532 ; PMID: 12481097
- An auxin-inducible gene from loblolly pine (Pinus taeda L.) is differentially expressed in mature and juvenile-phase shoots and encodes a putative transmembrane protein. DOI: 10.1007/s00425-003-1175-4 ; PMID: 14722770
- Transcriptional divergence of the duplicated oxidative stress-responsive genes in the Arabidopsis genome. DOI: 10.1111/j.1365-313X.2004.02295.x ; PMID: 15634198
- Expression profiling reveals COI1 to be a key regulator of genes involved in and methyl jasmonate-induced secondary metabolism, defence, and hormone interactions. DOI: 10.1007/s11103-005-7306-5 ; PMID: 16021335
- CONSTITUTIVELY PHOTOMORPHOGENIC1 is required for the UV-B response in Arabidopsis. DOI: 10.1105/tpc.105.040097 ; PMID: 16829591
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Amino Acid Export in Developing Arabidopsis Seeds Depends on UmamiT Facilitators. DOI: 10.1016/j.cub.2015.10.038 ; PMID: 26628011
- Nitrogen remobilization during leaf senescence: lessons from Arabidopsis to crops. DOI: 10.1093/jxb/erw365 ; PMID: 27707774
- Arabidopsis UMAMIT24 and 25 are amino acid exporters involved in seed loading. DOI: 10.1093/jxb/ery302 ; PMID: 30312461
- The Peptide Hormone Receptor CEPR1 Functions in the Reproductive Tissue to Control Seed Size and Yield. DOI: 10.1104/pp.20.00172 ; PMID: 32317363
Gene Resources
- UniProt: A0A178VVN5
- EMBL: CACRSJ010000105, CACSHJ010000088, LR881467
- AlphaFoldDB: A0A178VVN5
- EnsemblPlants: AT2G40900.1
- Gramene: AT2G40900.1
- KEGG: ath:AT2G40900
- Orthologous matrix: KCCSRNS
- ExpressionAtlas: AT2G40900
- InterPro: IPR000620, IPR030184
- PANTHER: PTHR31218
- SUPFAM: SSF103481
- OrthoDB: A0A178VVN5
- SWISS-MODEL: A0A178VVN5
Homologs
- Arachis hypogaea arahy.Tifrunner.gnm1.ann1.83A53S
- Glycine max Glyma.13G227100.1.p
- Medicago truncatula Medtr6g007470
- Musa acuminata GSMUA_AchrUn_randomP03020_001
- Oryza sativa ORF11, OsCLIP
- Vitis vinifera GSVIVT01019717001
Sequences
cDNA Sequence
- >AT2G40900.1
ATTAACGCTAACGTCACCGAAAAAAAATAAAATAAAAATAACAAAAATACAAAGGAAGAAATCAGAGAACACTGAACATATCCGAATAATATGCTATATATACAAAGAACCTCTCACCACTTGGTTCTCAGGAAAAAGCACATTCTCCAAGTGTTTCTCTCCTCTCTTTTCCTAACTCAGTTTTCTTATATACATAACACTAATTTGACAATTTTTTTGTCCTCGAGGATCCTAAAATAACTCCAAAACTTTGATTGGTTTTTCTTGCTCTAAAACAAAAACAAAAACAAAATATTAAGATGGGATTAAGGATGTCAGAATCAGCTAAACCTTATTTTGCAATGGTCTGTCTTCAGTTCGGATACGCAGGTATGAACTTAGTAACTAAAACCGTCCTAGACCGCGGTATGAGCCATTACGTTCTTGTTGCATACCGCAACGCTTTTGCCACAGCCGCTATCGCACCCTTCGCTCTTCTCTCCGAAAGGAAAGTGAGATCAAAGATGACGTTTCCAATATTCATGCGAATATTTCTTCTTGCTCTTCTCGGGCCGGTGATTGATCAGAACTTATACTATATCGGTCTAAAACTCACATCACCAACGTTTTCCTCCGCCGTTAGCAACATCGTGCCTGCAATTACCATTATCCTTGCCACACTTTTCAGGATGGAGAAAGTGGAGATGAGAAAAGTAAGATGCCTGGTAAAAGTGATGGGGACGTTAGTGACAGTGGTTGGATCCATATTGATGATATTCTACAAAGGTCCTTTCATTAATTTCTTCCGGTCTCACCTCACGGCCGCCTCTTCGCCGCCGACGGCTGACTATCTTAAGGCTGCCGTCTTCCTACTCCTCGCTTCCCTCTCATGGGCGTCGTTCTTTGTTCTTCAGGCTGCGACTTTGAAGAAATACTCAGCCCATCTCTCAATGTCAACAATGGTGTGTTTCATGGGAACGTTACAGTCTTTAGCCCTAGCCTTCGTAATGGAACACAATCCTTCTGCTTTGAACATCGGTTTTGACATGAACCTTCTCGCTTCTGCCTACGCGGGAATAATGTCGTCGAGCATAGCTTACTACGTTCAAGGACTTATGATGCAGCGAAAAGGACCGGTCTTTGTCACTGCTTTTAACCCTCTTATCGTTGTCATTGTCTCCATCATGAGCTTCTTCGTTCTCGGTCAAGGAATCTACCTTGGAGGGGTTATTGGAGTGGTTGTTTTGATGGTGGGAGTCTACGCCGTGTTATGGGGCAAACATGTAGATGATGACGGCGAAGAAACACGCCATGAAGATAACGTTGTAGCCGTTAAGTGTTGTAGTGGCAATAATGGTCTAACGATAATGCCGAAAATCGACGAAGCTGATGAGGAGGATGTTGAAACCGGAAAGGCTACGTCGGAGAAGGAGTCGTCAGTTCCGGAAGTGGTGGTGGTAGTTTTTTGTAGTGAAAATGTGCATAGCGTTTCACGACCTAACTAGATGGGTTTTCAATTTTTTTTTTACTTTTTGTTAGAAGCAAAATTGGGGAGAAGAGTAACTTCTTTTTTTGATACTTGTAAGTTTGAATTCCTTTTCCCGTGCTTCAAAAGTTTTATATTTTATTTATAGTTTTGATTTCTTATTGTAACTAAGGGATTCGATTTTGATCGTTGACTAGCTATACAATCCCGTGTAATCACTACATTTGGTATTGGTACGCATCTGTTACATACCATTTTTACGGCGGTTTTAGTGAACTATATTATAAAAAAAAATCGTAAGTTTTTTTGTGTGTGTG
CDS Sequence
- >AT2G40900.1
ATGGGATTAAGGATGTCAGAATCAGCTAAACCTTATTTTGCAATGGTCTGTCTTCAGTTCGGATACGCAGGTATGAACTTAGTAACTAAAACCGTCCTAGACCGCGGTATGAGCCATTACGTTCTTGTTGCATACCGCAACGCTTTTGCCACAGCCGCTATCGCACCCTTCGCTCTTCTCTCCGAAAGGAAAGTGAGATCAAAGATGACGTTTCCAATATTCATGCGAATATTTCTTCTTGCTCTTCTCGGGCCGGTGATTGATCAGAACTTATACTATATCGGTCTAAAACTCACATCACCAACGTTTTCCTCCGCCGTTAGCAACATCGTGCCTGCAATTACCATTATCCTTGCCACACTTTTCAGGATGGAGAAAGTGGAGATGAGAAAAGTAAGATGCCTGGTAAAAGTGATGGGGACGTTAGTGACAGTGGTTGGATCCATATTGATGATATTCTACAAAGGTCCTTTCATTAATTTCTTCCGGTCTCACCTCACGGCCGCCTCTTCGCCGCCGACGGCTGACTATCTTAAGGCTGCCGTCTTCCTACTCCTCGCTTCCCTCTCATGGGCGTCGTTCTTTGTTCTTCAGGCTGCGACTTTGAAGAAATACTCAGCCCATCTCTCAATGTCAACAATGGTGTGTTTCATGGGAACGTTACAGTCTTTAGCCCTAGCCTTCGTAATGGAACACAATCCTTCTGCTTTGAACATCGGTTTTGACATGAACCTTCTCGCTTCTGCCTACGCGGGAATAATGTCGTCGAGCATAGCTTACTACGTTCAAGGACTTATGATGCAGCGAAAAGGACCGGTCTTTGTCACTGCTTTTAACCCTCTTATCGTTGTCATTGTCTCCATCATGAGCTTCTTCGTTCTCGGTCAAGGAATCTACCTTGGAGGGGTTATTGGAGTGGTTGTTTTGATGGTGGGAGTCTACGCCGTGTTATGGGGCAAACATGTAGATGATGACGGCGAAGAAACACGCCATGAAGATAACGTTGTAGCCGTTAAGTGTTGTAGTGGCAATAATGGTCTAACGATAATGCCGAAAATCGACGAAGCTGATGAGGAGGATGTTGAAACCGGAAAGGCTACGTCGGAGAAGGAGTCGTCAGTTCCGGAAGTGGTGGTGGTAGTTTTTTGTAGTGAAAATGTGCATAGCGTTTCACGACCTAACTAG
Protein Sequence
- >AT2G40900.1
MGLRMSESAKPYFAMVCLQFGYAGMNLVTKTVLDRGMSHYVLVAYRNAFATAAIAPFALLSERKVRSKMTFPIFMRIFLLALLGPVIDQNLYYIGLKLTSPTFSSAVSNIVPAITIILATLFRMEKVEMRKVRCLVKVMGTLVTVVGSILMIFYKGPFINFFRSHLTAASSPPTADYLKAAVFLLLASLSWASFFVLQAATLKKYSAHLSMSTMVCFMGTLQSLALAFVMEHNPSALNIGFDMNLLASAYAGIMSSSIAYYVQGLMMQRKGPVFVTAFNPLIVVIVSIMSFFVLGQGIYLGGVIGVVVLMVGVYAVLWGKHVDDDGEETRHEDNVVAVKCCSGNNGLTIMPKIDEADEEDVETGKATSEKESSVPEVVVVVFCSENVHSVSRPN