Information report for AT2G40800
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis. DOI: 10.1105/tpc.104.022830 ; PMID: 15258262
- Novel tonoplast transporters identified using a proteomic approach with vacuoles isolated from cauliflower buds. DOI: 10.1104/pp.107.096917 ; PMID: 17660356
- Heterosis manifestation during early Arabidopsis seedling development is characterized by intermediate gene expression and enhanced metabolic activity in the hybrids. DOI: 10.1111/j.1365-313X.2012.05021.x ; PMID: 22487254
- Evidence for interactions between the mitochondrial import apparatus and respiratory chain complexes via Tim21-like proteins in Arabidopsis. DOI: 10.3389/fpls.2014.00082 ; PMID: 24653731
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
Gene Resources
- UniProt: Q9SHB0
- EMBL: AY065132, AY081582, CP002685
- AlphaFoldDB: Q9SHB0
- EnsemblPlants: AT2G40800.1
- Gramene: AT2G40800.1
- Orthologous matrix: FALWRIM
- ExpressionAtlas: AT2G40800
- InterPro: IPR038552
- PANTHER: PTHR36354, PTHR36354:SF2
- Gene3D: 3.10.450.320
- OrthoDB: Q9SHB0
- SWISS-MODEL: Q9SHB0
Homologs
- Brassica napus GSBRNA2T00009001001
- Brassica oleracea Bo4g045310
Sequences
cDNA Sequence
- >AT2G40800.1
CCGACCCGACCCGATATTTCTTCAATTCGATCGATCACCATTGATCCCCAATCGCTGCTACGAACAGCAAGCTTCGGCGAAAATGGGATTCATTACGACTCTTTAACTCATCGATCCCAATTTGAAAACTCGCATTTCCATTGATTCCTTTGATCAGTTCTCAAGTCGAAGGTAATTTTGAATCAGGCGCGATACTCCAAGTTAGGATCTTCGGTTCGAGCTTTTGTGTGATCGATCTAAAAGGCTATAGAATATGGTGAAACCATCGGATTTCAAAGCAATTCAAGGGTTTATTCGGCTGCATTACACTCGGGTCAACCCTGTCACAATTGGCCGATCAAACCCATCAGCTTTGTCTTCTCCAGCTATTCCCTCCAATGGTGTTTCTCAGCTTCAGCCTAAGTTTAGCTTCCACAGCTTATCCTCGAAACCCACTTCCAAAAACGTGGGATTATATCAGATTCTGTCGTCTCCTAAGCTCAATCCTAAGTTGCAGCAAGCTTTGGGTTTGCCTCGTGTGAATGTGAGTTTTGCATCGGCGTTTAGATTGGTATCCACTAAGAGCTCTGGATTTCGAAAGGTTGATGGGAGTTTTGCGAGAAAGGTTGTTGATAAGCCTGTCAAAGCTGTTAGTTCTACTTTTGCTAGATACCGTGAGGCTATAGGGTTGCACATTGATGCATTTTGGAAAAAGAATAGTCTTGTTGTGTTTGGAGCTGCAGGTGTTTTTGTATGTATTTTCCTTTGGCGGATTATGTTTGGAATTGCTAGTACGTTTGTTGGCCTCTCAGAGGGCATGGCCAAGTATGGGTTTCTTGCACTCTCCTCAGCCATTGTAGCATTTTCTGGATTATACCTCCGCTCAAGGTTTACAATTAATCCGGATAAAGTTTATAGAATGACCATGAGGAAGATCAACACGGCAGCTGAAATTCTAGAAGTTATGGGTGCTCCTCTGTCAGGATCAGATTTACGAGCGTATGTGATGTCAGGTGGTGGCATAACATTTAAGAAATTCAAGCCAACAATTAGGAGCAAGCGCTGCTTTCTTCTATTCCCCGTTCAGGGTTCTGAGCAAAAGGGCCTTGTTAGCGTTGAAGTTAAGAAGAAGAAAGGCCAGTATGACATGAAGCTTTTGGCGGTAGATATTCCAATGGCATCTGGTCCCGACCAACGGTTATTTCTGATTGGCGATGAAGAAGAGTACAGAATTGGTGGTGGTTTAATCTCTGTGTTAAGAGACCCTGTTGTGAAAGCAATGGCAGCAACTAAGGAGTTCGATAATCTTGATAGAATCGAAGAGGAAGAAGACGCTGAAAGAGAACTTCAAGAAGCTGAAAGAAAGCATCGTGAAGAGATCGAGAAACTCGAGAAGGAGGGCTCATAACTCGTATTTTCTTCCCCAGAAATATTTTCTTCTTCGGTGGATATAAGAACAACACCATGAATCTTTTCCAAAACCCAGTTTTTTTTTTGTTTTTGCTAACTTTCGAGAAATAAATTTCCCTGGCTATGTTGATCAGAGGATGCTATTGTGATTACTGATTCTTCTTCATACAAGATGTATCTCCTTGTTAGAGCAGCCTGTGCTGTGAAAAACCGTTTGGTTTAGAACTTTTGTCTTCCAAAGTATAAACTGGTGTAAGCTTAATAAAGGCCCACCATAGCCCGCCCAAAATAGACACAGCGTCATTTTCTATGTCGTCTTCAACCAGTTTCTGGTCTACAAAATTAGTTATGGTTAATCGAACCAATTTCCCATCGCATGTATGATGTAACCCAAGA - >AT2G40800.2
CCGACCCGACCCGATATTTCTTCAATTCGATCGATCACCATTGATCCCCAATCGCTGCTACGAACAGCAAGCTTCGGCGAAAATGGGATTCATTACGACTCTTTAACTCATCGATCCCAATTTGAAAACTCGCATTTCCATTGATTCCTTTGATCAGTTCTCAAGTCGAAGGTAATTTTGAATCAGGCGCGATACTCCAAGTTAGGATCTTCGGTTCGAGCTTTTGTGTGATCGATCTAAAAGGCTATAGAATATGGTGAAACCATCGGATTTCAAAGCAATTCAAGGGTTTATTCGGCTGCATTACACTCGGGTCAACCCTGTCACAATTGGCCGATCAAACCCATCAGCTTTGTCTTCTCCAGCTATTCCCTCCAATGGTGTTTCTCAGCTTCAGCCTAAGTTTAGCTTCCACAGCTTATCCTCGAAACCCACTTCCAAAAACGTGGGATTATATCAGATTCTGTCGTCTCCTAAGCTCAATCCTAAGTTGCAGCAAGCTTTGGGTTTGCCTCGTGTGAATGTGAGTTTTGCATCGGCGTTTAGATTGGTATCCACTAAGAGCTCTGGATTTCGAAAGGTTGATGGGAGTTTTGCGAGAAAGGTTGTTGATAAGCCTGTCAAAGCTGTTAGTTCTACTTTTGCTAGATACCGTGAGGCTATAGGGTTGCACATTGATGCATTTTGGAAAAAGAATAGTCTTGTTGTGTTTGGAGCTGCAGGTGTTTTTGTATGTATTTTCCTTTGGCGGATTATGTTTGGAATTGCTAGTACGTTTGTTGGCCTCTCAGAGGGCATGGCCAAGTATGGGTTTCTTGCACTCTCCTCAGCCATTGTAGCATTTTCTGGATTATACCTCCGCTCAAGGTTTACAATTAATCCGGATAAAGTTTATAGAATGACCATGAGGAAGATCAACACGGCAGCTGAAATTCTAGAAGTTATGGGTGCTCCTCTGTCAGGATCAGATTTACGAGCGTATGTGATGTCAGGTGGTGGCATAACATTTAAGAAATTCAAGCCAACAATTAGGAGCAAGCGCTGCTTTCTTCTATTCCCCGTTCAGGGTTCTGAGCAAAAGGGCCTTGTTAGCGTTGAAGTTAAGAAGAAGAAAGGCCAGTATGACATGAAGCTTTTGGCGGTAGATATTCCAATGGCATCTGGTCCCGACCAACGGTTATTTCTGATTGGCGATGAAGAAGAGTACAGAATTGGTGGTGGTTTAATCTCTGTGTTAAGAGACCCTGTTGTGAAAGCAATGGCAGCAACTAAGGAGTTCGATAATCTTGATAGAATCGAAGAGGAAGAAGACGCTGAAAGAGAACTTCAAGAAGCTGAAAGAAAGCATCGTGAAGAGATCGAGAAACTCGAGAAGGAGGGCTCATAACTCGTATTTTCTTCCCCAGAAATATTTTCTTCTTCGGTGGATATAAGAACAACACCATGAATCTTTTCCAAAACCCAGTTTTTTTTTTGTTTTTGCTAACTTTCGAGAAATAAATTTCCCTGGCTATGTTGATCAGAGGATGCTATTGTGATTACTGATTCTTCTTCATACAAGATGTATCTCCTTGTTAGAGCAGCCTGTGCTGTGAAAAACCGTTTGGTTTAGAACTTTTGTCTTCCAAAGTATAAACTGGTGTAAGCTTAATAAAGGCCCACCATAGCCCGCCCAAAATAGACACAGCGTCATTTTCTATGTCGTCTTCAACCAGTTTCTGGTCTACAAAATTAGTTATGGTTAATCGAACCAATTTCCCATCGCATGTATGATGTAACCCAAGA
CDS Sequence
- >AT2G40800.1
ATGGTGAAACCATCGGATTTCAAAGCAATTCAAGGGTTTATTCGGCTGCATTACACTCGGGTCAACCCTGTCACAATTGGCCGATCAAACCCATCAGCTTTGTCTTCTCCAGCTATTCCCTCCAATGGTGTTTCTCAGCTTCAGCCTAAGTTTAGCTTCCACAGCTTATCCTCGAAACCCACTTCCAAAAACGTGGGATTATATCAGATTCTGTCGTCTCCTAAGCTCAATCCTAAGTTGCAGCAAGCTTTGGGTTTGCCTCGTGTGAATGTGAGTTTTGCATCGGCGTTTAGATTGGTATCCACTAAGAGCTCTGGATTTCGAAAGGTTGATGGGAGTTTTGCGAGAAAGGTTGTTGATAAGCCTGTCAAAGCTGTTAGTTCTACTTTTGCTAGATACCGTGAGGCTATAGGGTTGCACATTGATGCATTTTGGAAAAAGAATAGTCTTGTTGTGTTTGGAGCTGCAGGTGTTTTTGTATGTATTTTCCTTTGGCGGATTATGTTTGGAATTGCTAGTACGTTTGTTGGCCTCTCAGAGGGCATGGCCAAGTATGGGTTTCTTGCACTCTCCTCAGCCATTGTAGCATTTTCTGGATTATACCTCCGCTCAAGGTTTACAATTAATCCGGATAAAGTTTATAGAATGACCATGAGGAAGATCAACACGGCAGCTGAAATTCTAGAAGTTATGGGTGCTCCTCTGTCAGGATCAGATTTACGAGCGTATGTGATGTCAGGTGGTGGCATAACATTTAAGAAATTCAAGCCAACAATTAGGAGCAAGCGCTGCTTTCTTCTATTCCCCGTTCAGGGTTCTGAGCAAAAGGGCCTTGTTAGCGTTGAAGTTAAGAAGAAGAAAGGCCAGTATGACATGAAGCTTTTGGCGGTAGATATTCCAATGGCATCTGGTCCCGACCAACGGTTATTTCTGATTGGCGATGAAGAAGAGTACAGAATTGGTGGTGGTTTAATCTCTGTGTTAAGAGACCCTGTTGTGAAAGCAATGGCAGCAACTAAGGAGTTCGATAATCTTGATAGAATCGAAGAGGAAGAAGACGCTGAAAGAGAACTTCAAGAAGCTGAAAGAAAGCATCGTGAAGAGATCGAGAAACTCGAGAAGGAGGGCTCATAA - >AT2G40800.2
ATGGTGAAACCATCGGATTTCAAAGCAATTCAAGGGTTTATTCGGCTGCATTACACTCGGGTCAACCCTGTCACAATTGGCCGATCAAACCCATCAGCTTTGTCTTCTCCAGCTATTCCCTCCAATGGTGTTTCTCAGCTTCAGCCTAAGTTTAGCTTCCACAGCTTATCCTCGAAACCCACTTCCAAAAACGTGGGATTATATCAGATTCTGTCGTCTCCTAAGCTCAATCCTAAGTTGCAGCAAGCTTTGGGTTTGCCTCGTGTGAATGTGAGTTTTGCATCGGCGTTTAGATTGGTATCCACTAAGAGCTCTGGATTTCGAAAGGTTGATGGGAGTTTTGCGAGAAAGGTTGTTGATAAGCCTGTCAAAGCTGTTAGTTCTACTTTTGCTAGATACCGTGAGGCTATAGGGTTGCACATTGATGCATTTTGGAAAAAGAATAGTCTTGTTGTGTTTGGAGCTGCAGGTGTTTTTGTATGTATTTTCCTTTGGCGGATTATGTTTGGAATTGCTAGTACGTTTGTTGGCCTCTCAGAGGGCATGGCCAAGTATGGGTTTCTTGCACTCTCCTCAGCCATTGTAGCATTTTCTGGATTATACCTCCGCTCAAGGTTTACAATTAATCCGGATAAAGTTTATAGAATGACCATGAGGAAGATCAACACGGCAGCTGAAATTCTAGAAGTTATGGGTGCTCCTCTGTCAGGATCAGATTTACGAGCGTATGTGATGTCAGGTGGTGGCATAACATTTAAGAAATTCAAGCCAACAATTAGGAGCAAGCGCTGCTTTCTTCTATTCCCCGTTCAGGGTTCTGAGCAAAAGGGCCTTGTTAGCGTTGAAGTTAAGAAGAAGAAAGGCCAGTATGACATGAAGCTTTTGGCGGTAGATATTCCAATGGCATCTGGTCCCGACCAACGGTTATTTCTGATTGGCGATGAAGAAGAGTACAGAATTGGTGGTGGTTTAATCTCTGTGTTAAGAGACCCTGTTGTGAAAGCAATGGCAGCAACTAAGGAGTTCGATAATCTTGATAGAATCGAAGAGGAAGAAGACGCTGAAAGAGAACTTCAAGAAGCTGAAAGAAAGCATCGTGAAGAGATCGAGAAACTCGAGAAGGAGGGCTCATAA
Protein Sequence
- >AT2G40800.1
MVKPSDFKAIQGFIRLHYTRVNPVTIGRSNPSALSSPAIPSNGVSQLQPKFSFHSLSSKPTSKNVGLYQILSSPKLNPKLQQALGLPRVNVSFASAFRLVSTKSSGFRKVDGSFARKVVDKPVKAVSSTFARYREAIGLHIDAFWKKNSLVVFGAAGVFVCIFLWRIMFGIASTFVGLSEGMAKYGFLALSSAIVAFSGLYLRSRFTINPDKVYRMTMRKINTAAEILEVMGAPLSGSDLRAYVMSGGGITFKKFKPTIRSKRCFLLFPVQGSEQKGLVSVEVKKKKGQYDMKLLAVDIPMASGPDQRLFLIGDEEEYRIGGGLISVLRDPVVKAMAATKEFDNLDRIEEEEDAERELQEAERKHREEIEKLEKEGS - >AT2G40800.2
MVKPSDFKAIQGFIRLHYTRVNPVTIGRSNPSALSSPAIPSNGVSQLQPKFSFHSLSSKPTSKNVGLYQILSSPKLNPKLQQALGLPRVNVSFASAFRLVSTKSSGFRKVDGSFARKVVDKPVKAVSSTFARYREAIGLHIDAFWKKNSLVVFGAAGVFVCIFLWRIMFGIASTFVGLSEGMAKYGFLALSSAIVAFSGLYLRSRFTINPDKVYRMTMRKINTAAEILEVMGAPLSGSDLRAYVMSGGGITFKKFKPTIRSKRCFLLFPVQGSEQKGLVSVEVKKKKGQYDMKLLAVDIPMASGPDQRLFLIGDEEEYRIGGGLISVLRDPVVKAMAATKEFDNLDRIEEEEDAERELQEAERKHREEIEKLEKEGS