Information report for AT2G40670
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- Two-component circuitry in Arabidopsis cytokinin signal transduction. DOI: 10.1038/35096500 ; PMID: 11574878
- Two-component signal transduction pathways in Arabidopsis. DOI: 10.1104/pp.005504 ; PMID: 12068096
- Characterization of the ARR15 and ARR16 response regulators with special reference to the cytokinin signaling pathway mediated by the AHK4 histidine kinase in roots of Arabidopsis thaliana. DOI: 10.1093/pcp/pcf121 ; PMID: 12354925
- Differential expression of two type-A response regulators in plants and cell cultures of Catharanthus roseus (L.) G. Don. DOI: 10.1093/jxb/erg185 ; PMID: 12810857
- Expression profiling of cytokinin action in Arabidopsis. DOI: 10.1104/pp.103.021436 ; PMID: 12913156
- Cytokinin signal perception and transduction. DOI: 10.1016/s1369-5266(03)00087-6 ; PMID: 12972049
- Monitoring genome-wide changes in gene expression in response to endogenous cytokinin reveals targets in Arabidopsis thaliana. DOI: 10.1016/s0014-5793(03)01194-3 ; PMID: 14623097
- The Arabidopsis transcription factor HY5 integrates light and hormone signaling pathways. DOI: 10.1111/j.1365-313X.2004.02052.x ; PMID: 15078335
- The response regulator 2 mediates ethylene signalling and hormone signal integration in Arabidopsis. DOI: 10.1038/sj.emboj.7600337 ; PMID: 15282545
- Arabidopsis response regulator, ARR22, ectopic expression of which results in phenotypes similar to the wol cytokinin-receptor mutant. DOI: 10.1093/pcp/pch128 ; PMID: 15356332
- Combinatorial microarray analysis revealing arabidopsis genes implicated in cytokinin responses through the His->Asp Phosphorelay circuitry. DOI: 10.1093/pcp/pci033 ; PMID: 15695462
- Expression of a receptor kinase in Arabidopsis roots is stimulated by the basidiomycete Piriformospora indica and the protein accumulates in Triton X-100 insoluble plasma membrane microdomains. DOI: 10.1016/j.jplph.2004.08.012 ; PMID: 16146321
- Immediate-early and delayed cytokinin response genes of Arabidopsis thaliana identified by genome-wide expression profiling reveal novel cytokinin-sensitive processes and suggest cytokinin action through transcriptional cascades. DOI: 10.1111/j.1365-313X.2005.02530.x ; PMID: 16212609
- hca: an Arabidopsis mutant exhibiting unusual cambial activity and altered vascular patterning. DOI: 10.1111/j.1365-313X.2005.02526.x ; PMID: 16212606
- The Arabidopsis cold-responsive transcriptome and its regulation by ICE1. DOI: 10.1105/tpc.105.035568 ; PMID: 16214899
- A transcriptome-based characterization of habituation in plant tissue culture. DOI: 10.1104/pp.105.076059 ; PMID: 16489130
- Type III effectors orchestrate a complex interplay between transcriptional networks to modify basal defence responses during pathogenesis and resistance. DOI: 10.1111/j.1365-313X.2006.02672.x ; PMID: 16553893
- Gene expression programs during shoot, root, and callus development in Arabidopsis tissue culture. DOI: 10.1104/pp.106.081240 ; PMID: 16648215
- and jasmonic acid/ethylene-dependent responses via EDS1 and PAD4. DOI: 10.1111/j.1365-313X.2006.02806.x ; PMID: 16813576
- Different plant hormones regulate similar processes through largely nonoverlapping transcriptional responses. DOI: 10.1016/j.cell.2006.05.050 ; PMID: 16901781
- Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7(ARR7) overexpression in cytokinin response. DOI: 10.1007/s00438-006-0177-x ; PMID: 17061125
- Unique, shared, and redundant roles for the Arabidopsis SWI/SNF chromatin remodeling ATPases BRAHMA and SPLAYED. DOI: 10.1105/tpc.106.048272 ; PMID: 17293567
- Cytokinin import rate as a signal for photosynthetic acclimation to canopy light gradients. DOI: 10.1104/pp.106.094631 ; PMID: 17277095
- Developmental steps in acquiring competence for shoot development in Arabidopsis tissue culture. DOI: 10.1007/s00425-007-0565-4 ; PMID: 17581762
- DNA-binding study identifies C-box and hybrid C/G-box or C/A-box motifs as high-affinity binding sites for STF1 and LONG HYPOCOTYL5 proteins. DOI: 10.1104/pp.107.113217 ; PMID: 18287490
- Type B response regulators of Arabidopsis play key roles in cytokinin signaling and plant development. DOI: 10.1105/tpc.108.059584 ; PMID: 18723577
- Genome-wide comparative analysis of type-A Arabidopsis response regulator genes by overexpression studies reveals their diverse roles and regulatory mechanisms in cytokinin signaling. DOI: 10.1038/cr.2009.88 ; PMID: 19621034
- In planta analysis of a cis-regulatory cytokinin response motif in Arabidopsis and identification of a novel enhancer sequence. DOI: 10.1093/pcp/pct060 ; PMID: 23620480
- Sexual epigenetics: gender-specific methylation of a gene in the sex determining region of Populus balsamifera. DOI: 10.1038/srep45388 ; PMID: 28345647
- The bHLH transcription factor SPATULA enables cytokinin signaling, and both activate auxin biosynthesis and transport genes at the medial domain of the gynoecium. DOI: 10.1371/journal.pgen.1006726 ; PMID: 28388635
- Cytokinin is involved in TPS22-mediated selenium tolerance in Arabidopsis thaliana. DOI: 10.1093/aob/mcy093 ; PMID: 29868879
- Modulation of Asymmetric Division Diversity through Cytokinin and SPEECHLESS Regulatory Interactions in the Arabidopsis Stomatal Lineage. DOI: 10.1016/j.devcel.2018.08.007 ; PMID: 30197241
- Asymmetric distribution of cytokinins determines root hydrotropism in Arabidopsis thaliana. DOI: 10.1038/s41422-019-0239-3 ; PMID: 31601978
- MYC2 regulates ARR16, a component of cytokinin signaling pathways, in Arabidopsis seedling development. DOI: 10.1002/pld3.177 ; PMID: 31788657
- De Novo Shoot Regeneration Controlled by HEN1 and TCP3/4 in Arabidopsis. DOI: 10.1093/pcp/pcaa083 ; PMID: 32579181
- Diversified Regulation of Cytokinin Levels and Signaling During Botrytis cinerea Infection in Arabidopsis. DOI: 10.3389/fpls.2021.584042 ; PMID: 33643340
- Two-component circuitry in Arabidopsis cytokinin signal transduction. DOI: 10.1038/35096500 ; PMID: 11574878
- Characterization of the ARR15 and ARR16 response regulators with special reference to the cytokinin signaling pathway mediated by the AHK4 histidine kinase in roots of Arabidopsis thaliana. DOI: 10.1093/pcp/pcf121 ; PMID: 12354925
Gene Resources
- UniProt: F4II22
- EMBL: CP002685
- AlphaFoldDB: F4II22
- EnsemblPlants: AT2G40670.2
- Gramene: AT2G40670.2
- ExpressionAtlas: AT2G40670
- InterPro: IPR001789, IPR011006, IPR045279
- PANTHER: PTHR43874, PTHR43874:SF99
- SUPFAM: SSF52172
- PROSITE: PS50110
- Gene3D: 3.40.50.2300
- SWISS-MODEL: F4II22
- Conserved Domain Database: cd17581
Homologs
- Brachypodium distachyon BRADI_3g45930v3, BRADI_5g11350v3
- Hordeum vulgare HORVU6Hr1G059200
- Musa acuminata Ma06_g30730, Ma03_g18240, Ma08_g29720, Ma08_g32650, Ma01_g21240, Ma06_g19860
- Oryza sativa OsRR9, OsRR4, OsRR6, OsRR3, OsRR5, OsRR7, LOC_Os04g36070, OsRR1
Sequences
cDNA Sequence
- >AT2G40670.2
TGAAACTAAAACCCCTAAAAATAAGAGATCACGAAATATCCGTGATATTCTTTGATGCAATCTCTTCCCCATTGCTCTCTGTTTTTATTTACTTTTAAAAATTATTCTGCAGAATTATATATAGTTGGGAAATCATAATGGAAAATTCTTCACCCACCTAAAAAATCAAAGAAACCATCATAAATACCATCACCAGAGATTCACATGATTCATGCATACACACTTCTGAGTCTGTCACTTTCTTCTTCATTGTTTGTGTTTTGTCTTTTTGATTTATTTTTGTTGAAGATGGAGAACTAAAAGCAATGTCTGCAAGGTCTTTATATTAATGCTAGAGTCAGTCTCGCTTATTATCAAGTTGTTTTCTTTATCAGTTACTTGACATTTAAGGAACAAAGGAGATCATGAACAGTTCAGGAGGTTCTTGTTCGTCTTTAATGGATGTGGTGGCTTATGATCATCATCTTCATCATGGTCATGATGAAGAGCTTCATGTTTTAGCTGTAGATGATAATCTTATTGACCGTAAACTCGTTGAGAGGTTGCTCAAGATCTCTTGTTGCAAAGTGACAACAGCAGAGAATGCGCTTAGAGCATTGGAGTATTTGGGTTTGGGAGATCAAAATCAGCATATTGATGCATTGACCTGTAACGTTATGAAGGTGAGTCTAATCATCACCGATTACTGTATGCCTGGAATGACAGGTTTTGAGCTACTCAAGAAAGTGAAGCAGGAGTCATCAAATCTGAGAGAGGTTCCTGTTGTGATAATGTCTTCAGAGAATATTCCTACTCGCATAAACAAATGTTTAGCGAGTGGAGCTCAAATGTTTATGCAGAAGCCTTTGAAGCTTGCTGATGTTGAGAAGCTTAAATGTCATCTCATGAACTGCAGAAGCTAACCATGAGAGATTTATAATGTTAGCCCTAACCATGAAACGTTTTCATTGTGTCTTGATTCCTTATTTGATTATTTTACATGTTTTTCTTGAAATCAAGAAATGTTTTCACATGCC - >AT2G40670.1
TGAAACTAAAACCCCTAAAAATAAGAGATCACGAAATATCCGTGATATTCTTTGATGCAATCTCTTCCCCATTGCTCTCTGTTTTTATTTACTTTTAAAAATTATTCTGCAGAATTATATATAGTTGGGAAATCATAATGGAAAATTCTTCACCCACCTAAAAAATCAAAGAAACCATCATAAATACCATCACCAGAGATTCACATGATTCATGCATACACACTTCTGAGTCTGTCACTTTCTTCTTCATTGTTTGTGTTTTGTCTTTTTGATTTATTTTTGTTGAAGATGGAGAACTAAAAGCAATGTCTGCAAGGTCTTTATATTAATGCTAGAGTCAGTCTCGCTTATTATCAAGTTGTTTTCTTTATCAGTTACTTGACATTTAAGGAACAAAGGAGATCATGAACAGTTCAGGAGGTTCTTGTTCGTCTTTAATGGATGTGGTGGCTTATGATCATCATCTTCATCATGGTCATGATGAAGAGCTTCATGTTTTAGCTGTAGATGATAATCTTATTGACCGTAAACTCGTTGAGAGGTTGCTCAAGATCTCTTGTTGCAAAGTGACAACAGCAGAGAATGCGCTTAGAGCATTGGAGTATTTGGGTTTGGGAGATCAAAATCAGCATATTGATGCATTGACCTGTAACGTTATGAAGGTGAGTCTAATCATCACCGATTACTGTATGCCTGGAATGACAGGTTTTGAGCTACTCAAGAAAGTGAAGCAGGAGTCATCAAATCTGAGAGAGGTTCCTGTTGTGATAATGTCTTCAGAGAATATTCCTACTCGCATAAACAAATGTTTAGCGAGTGGAGCTCAAATGTTTATGCAGAAGCCTTTGAAGCTTGCTGATGTTGAGAAGCTTAAATGTCATCTCATGAACTGCAGAAGCTAACCATGAGAGATTTATAATGTTAGCCCTAACCATGAAACGTTTTCATTGTGTCTTGATTCCTTATTTGATTATTTTACATGTTTTTCTTGAAATCAAGAAATGTTTTCACATGCC
CDS Sequence
- >AT2G40670.2
ATGAACAGTTCAGGAGGTTCTTGTTCGTCTTTAATGGATGTGGTGGCTTATGATCATCATCTTCATCATGGTCATGATGAAGAGCTTCATGTTTTAGCTGTAGATGATAATCTTATTGACCGTAAACTCGTTGAGAGGTTGCTCAAGATCTCTTGTTGCAAAGTGACAACAGCAGAGAATGCGCTTAGAGCATTGGAGTATTTGGGTTTGGGAGATCAAAATCAGCATATTGATGCATTGACCTGTAACGTTATGAAGGTGAGTCTAATCATCACCGATTACTGTATGCCTGGAATGACAGGTTTTGAGCTACTCAAGAAAGTGAAGCAGGAGTCATCAAATCTGAGAGAGGTTCCTGTTGTGATAATGTCTTCAGAGAATATTCCTACTCGCATAAACAAATGTTTAGCGAGTGGAGCTCAAATGTTTATGCAGAAGCCTTTGAAGCTTGCTGATGTTGAGAAGCTTAAATGTCATCTCATGAACTGCAGAAGCTAA - >AT2G40670.1
ATGAACAGTTCAGGAGGTTCTTGTTCGTCTTTAATGGATGTGGTGGCTTATGATCATCATCTTCATCATGGTCATGATGAAGAGCTTCATGTTTTAGCTGTAGATGATAATCTTATTGACCGTAAACTCGTTGAGAGGTTGCTCAAGATCTCTTGTTGCAAAGTGACAACAGCAGAGAATGCGCTTAGAGCATTGGAGTATTTGGGTTTGGGAGATCAAAATCAGCATATTGATGCATTGACCTGTAACGTTATGAAGGTGAGTCTAATCATCACCGATTACTGTATGCCTGGAATGACAGGTTTTGAGCTACTCAAGAAAGTGAAGCAGGAGTCATCAAATCTGAGAGAGGTTCCTGTTGTGATAATGTCTTCAGAGAATATTCCTACTCGCATAAACAAATGTTTAGCGAGTGGAGCTCAAATGTTTATGCAGAAGCCTTTGAAGCTTGCTGATGTTGAGAAGCTTAAATGTCATCTCATGAACTGCAGAAGCTAA
Protein Sequence
- >AT2G40670.2
MNSSGGSCSSLMDVVAYDHHLHHGHDEELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKVSLIITDYCMPGMTGFELLKKVKQESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKPLKLADVEKLKCHLMNCRS - >AT2G40670.1
MNSSGGSCSSLMDVVAYDHHLHHGHDEELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQNQHIDALTCNVMKVSLIITDYCMPGMTGFELLKKVKQESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKPLKLADVEKLKCHLMNCRS