Information report for AT2G40370
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- SALK_063466 — no observable phenotype
- SALK_092440 — Seeds have reduced yields of guaiacyl-type lignin monomers.
- SALK_092440C — no observable phenotype
- SALK_093534C — no observable phenotype
Literature and News
- Transcriptional regulation of secondary growth in Arabidopsis thaliana. DOI: 10.1093/jxb/erg304 ; PMID: 14585825
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- Gene structure and molecular analysis of the laccase-like multicopper oxidase (LMCO) gene family in Arabidopsis thaliana. DOI: 10.1007/s00425-004-1472-6 ; PMID: 15940465
- CINNAMYL ALCOHOL DEHYDROGENASE-C and -D are the primary genes involved in lignin biosynthesis in the floral stem of Arabidopsis. DOI: 10.1105/tpc.105.030767 ; PMID: 15937231
- TRANSPARENT TESTA10 encodes a laccase-like enzyme involved in oxidative polymerization of flavonoids in Arabidopsis seed coat. DOI: 10.1105/tpc.105.035154 ; PMID: 16243908
- Mutant identification and characterization of the laccase gene family in Arabidopsis. DOI: 10.1093/jxb/erl022 ; PMID: 16804053
- MicroRNA-mediated systemic down-regulation of copper protein expression in response to low copper availability in Arabidopsis. DOI: 10.1074/jbc.M801406200 ; PMID: 18408011
- Functional characterization of four APETALA2-family genes (RAP2.6, RAP2.6L, DREB19 and DREB26) in Arabidopsis. DOI: 10.1007/s11103-010-9711-7 ; PMID: 21069430
- The laccase multigene family in Arabidopsis thaliana: towards addressing the mystery of their gene function(s). DOI: 10.1007/s00425-010-1298-3 ; PMID: 21063888
- Disruption of LACCASE4 and 17 results in tissue-specific alterations to lignification of Arabidopsis thaliana stems. DOI: 10.1105/tpc.110.082792 ; PMID: 21447792
- High-order mutants reveal an essential requirement for peroxidases but not laccases in Casparian strip lignification. DOI: 10.1073/pnas.2012728117 ; PMID: 33139576
- Seed-coat protective neolignans are produced by the dirigent protein AtDP1 and the laccase AtLAC5 in Arabidopsis. DOI: 10.1093/plcell/koaa014 ; PMID: 33751095
- Different combinations of laccase paralogs nonredundantly control the amount and composition of lignin in specific cell types and cell wall layers in Arabidopsis. DOI: 10.1093/plcell/koac344 ; PMID: 36449969
- a in poplar. DOI: 10.1046/j.1432-1327.1999.00061.x ; PMID: 9914531
Gene Resources
Homologs
- Brassica napus BnaTT10.A06, BnaTT10.C02
- Gossypium hirsutum GhLAC4-3
- Oryza sativa OsChI1, Oslacc, OsLAC, OsLAC13, OsLAC10, OsLAC17
- Prunus persica PRUPE_6G048400
- Solanum tuberosum Soltu.DM.05G022410
- Vitis vinifera VIT_06s0004g07420, VIT_218s0075g00580
Sequences
cDNA Sequence
- >AT2G40370.1
GCAAAACAAAACAATAAAAATAAACTACACAAATATATTCACCAAGTTTTTGAAAATGTATTGTATGTCTCTCTATATAAACTCCATCTCTTTTCTTGAAACTTCCCAACAAAACATTTTTCTCTCTTTTTCCACACTTCATCTAAAACCCTCCGGCTCGAACAGAAGCTTACAGAAATCACATCAATGGATGTCACCAAGAGCCTCCTCTGCTTCATCTCTTTCGTCGCCTTTCTTCTCTTCTCCTCCGTGGCAGAAGCCAACAAAGCACACCACCACGAGTTCATAATACAAGCGACAAAGGTGAAGAGACTATGTGAAACACACAACAGTATTACAGTCAATGGAATGTTTCCCGGTCCAATGCTTGTAGTCAACAACGGTGACACTCTCGTCGTCAAAGTTATCAACCGGGCCCGGTACAACATCACAATCCACTGGCACGGTGTGAGGCAGATGCGAACCGGTTGGGCTGACGGACCGGAATTTGTGACCCAATGCCCAATCAGACCGGGATCAAGTTACACGTACCGGTTTACAATTCAAGGACAGGAAGGTACACTTTGGTGGCATGCTCATAGTTCGTGGCTTAGAGCAACTGTCTACGGTTCACTTCTCGTCTTTCCTCCTGCTGGTTCGTCTTACCCATTCACAAAACCCCACCGCAACGTCCCTCTCCTTCTTGGTGAATGGTGGGACGCAAATCCGGTTGATGTGTTGAGAGAATCTATACGAACCGGAGGAGCTCCGAATAACTCAGACGCTTACACCATCAATGGTCAACCTGGCGATCTCTATAAATGCTCTTCTCAAGATACGACAGTAGTACCAATAAATGTTGGTGAGACTATACTACTACGAGTAATAAACTCAGCATTAAACCAACCGTTATTCTTCACGGTGGCTAATCACAAACTCACGGTGGTCGGAGCTGACGCGTCATACCTAAAACCCTTCACCACTAACGTGATAGTTCTTGGCCCGGGACAAACCACAGATGTCCTCATAACCGGTGACCAACCACCAAATCGCTACTACATGGCCGCAAGAGCTTACCAAAGCGCCCAAAACGCACCGTTTGGAAACACAACCACAACAGCAATCCTTCAATACAAATCCGCCCCTTGTTGCGGTGTAGGCGGCGGAAGTGGAACCAAGAAGGGTAATTCCTTCAAACCGATCATGCCTATCCTCCCTGCCTACAACGACACAAACACCGTCACACGTTTCAGCCAAAGCTTCCGGTCACTTAGACGAGCTGAGGTTCCGACAGAAATCGACGAGAATCTCTTCGTAACCATCGGACTCGGTCTCAACAACTGTCCTAAGAACTTCAGATCAAGAAGATGTCAAGGTCCTAACGGCACACGTTTCACTGCATCGATGAACAACGTTTCATTTGCTCTTCCAAGTAACTACTCACTCCTTCAAGCTCACCACCATGGGATCCCCGGAGTCTTCACAACCGATTTTCCGGCGAAGCCTCCGGTGAAATTTGATTACACTGGTAACAACATAAGCCGATCTCTCTACCAACCTGATAGAGGGACTAAGCTATACAAACTCAAGTATGGATCAAGGGTTCAGATTGTTCTTCAAGACACAGGTATAGTAACTCCCGAAAACCATCCCATTCATCTACACGGCTACGATTTCTACATTATCGCCGAGGGTTTCGGTAACTTCAATCCCAAGAAAGATACCGCGAAATTCAATCTTGAAGACCCGCCTCTCAGAAATACTGTCGGTGTACCTGTTAATGGTTGGGCCGTCATCAGATTCATCGCAGACAACCCTGGGGTCTGGATAATGCATTGTCATCTAGATGCACACATATCGTGGGGACTAGCCATGGCTTTTTTGGTTGAGAATGGAAATGGAGTTTTGCAGACAATAGAACAGCCTCCTCATGATTTGCCCGTTTGTTAGGAGTTCAAGAACTTTGTAACATAAAACCACATTATAGTTTTTCATGTTCTTCTATTCAATTGTTTTTTGTTGGTTATAGACGTAAACCGGGTCATACTCCTGAGTTGGCCCGGACCCTTCAGATTAAGTTTTCTCGATTATTGATGTATTCTTTTGACATTATAGTACCAAATCAAGTGCTAAGAGCCTAAGCATACGTATCATGAAAGTTTATTTTTTTCGTTTTTCTTTAT
CDS Sequence
- >AT2G40370.1
ATGGATGTCACCAAGAGCCTCCTCTGCTTCATCTCTTTCGTCGCCTTTCTTCTCTTCTCCTCCGTGGCAGAAGCCAACAAAGCACACCACCACGAGTTCATAATACAAGCGACAAAGGTGAAGAGACTATGTGAAACACACAACAGTATTACAGTCAATGGAATGTTTCCCGGTCCAATGCTTGTAGTCAACAACGGTGACACTCTCGTCGTCAAAGTTATCAACCGGGCCCGGTACAACATCACAATCCACTGGCACGGTGTGAGGCAGATGCGAACCGGTTGGGCTGACGGACCGGAATTTGTGACCCAATGCCCAATCAGACCGGGATCAAGTTACACGTACCGGTTTACAATTCAAGGACAGGAAGGTACACTTTGGTGGCATGCTCATAGTTCGTGGCTTAGAGCAACTGTCTACGGTTCACTTCTCGTCTTTCCTCCTGCTGGTTCGTCTTACCCATTCACAAAACCCCACCGCAACGTCCCTCTCCTTCTTGGTGAATGGTGGGACGCAAATCCGGTTGATGTGTTGAGAGAATCTATACGAACCGGAGGAGCTCCGAATAACTCAGACGCTTACACCATCAATGGTCAACCTGGCGATCTCTATAAATGCTCTTCTCAAGATACGACAGTAGTACCAATAAATGTTGGTGAGACTATACTACTACGAGTAATAAACTCAGCATTAAACCAACCGTTATTCTTCACGGTGGCTAATCACAAACTCACGGTGGTCGGAGCTGACGCGTCATACCTAAAACCCTTCACCACTAACGTGATAGTTCTTGGCCCGGGACAAACCACAGATGTCCTCATAACCGGTGACCAACCACCAAATCGCTACTACATGGCCGCAAGAGCTTACCAAAGCGCCCAAAACGCACCGTTTGGAAACACAACCACAACAGCAATCCTTCAATACAAATCCGCCCCTTGTTGCGGTGTAGGCGGCGGAAGTGGAACCAAGAAGGGTAATTCCTTCAAACCGATCATGCCTATCCTCCCTGCCTACAACGACACAAACACCGTCACACGTTTCAGCCAAAGCTTCCGGTCACTTAGACGAGCTGAGGTTCCGACAGAAATCGACGAGAATCTCTTCGTAACCATCGGACTCGGTCTCAACAACTGTCCTAAGAACTTCAGATCAAGAAGATGTCAAGGTCCTAACGGCACACGTTTCACTGCATCGATGAACAACGTTTCATTTGCTCTTCCAAGTAACTACTCACTCCTTCAAGCTCACCACCATGGGATCCCCGGAGTCTTCACAACCGATTTTCCGGCGAAGCCTCCGGTGAAATTTGATTACACTGGTAACAACATAAGCCGATCTCTCTACCAACCTGATAGAGGGACTAAGCTATACAAACTCAAGTATGGATCAAGGGTTCAGATTGTTCTTCAAGACACAGGTATAGTAACTCCCGAAAACCATCCCATTCATCTACACGGCTACGATTTCTACATTATCGCCGAGGGTTTCGGTAACTTCAATCCCAAGAAAGATACCGCGAAATTCAATCTTGAAGACCCGCCTCTCAGAAATACTGTCGGTGTACCTGTTAATGGTTGGGCCGTCATCAGATTCATCGCAGACAACCCTGGGGTCTGGATAATGCATTGTCATCTAGATGCACACATATCGTGGGGACTAGCCATGGCTTTTTTGGTTGAGAATGGAAATGGAGTTTTGCAGACAATAGAACAGCCTCCTCATGATTTGCCCGTTTGTTAG
Protein Sequence
- >AT2G40370.1
MDVTKSLLCFISFVAFLLFSSVAEANKAHHHEFIIQATKVKRLCETHNSITVNGMFPGPMLVVNNGDTLVVKVINRARYNITIHWHGVRQMRTGWADGPEFVTQCPIRPGSSYTYRFTIQGQEGTLWWHAHSSWLRATVYGSLLVFPPAGSSYPFTKPHRNVPLLLGEWWDANPVDVLRESIRTGGAPNNSDAYTINGQPGDLYKCSSQDTTVVPINVGETILLRVINSALNQPLFFTVANHKLTVVGADASYLKPFTTNVIVLGPGQTTDVLITGDQPPNRYYMAARAYQSAQNAPFGNTTTTAILQYKSAPCCGVGGGSGTKKGNSFKPIMPILPAYNDTNTVTRFSQSFRSLRRAEVPTEIDENLFVTIGLGLNNCPKNFRSRRCQGPNGTRFTASMNNVSFALPSNYSLLQAHHHGIPGVFTTDFPAKPPVKFDYTGNNISRSLYQPDRGTKLYKLKYGSRVQIVLQDTGIVTPENHPIHLHGYDFYIIAEGFGNFNPKKDTAKFNLEDPPLRNTVGVPVNGWAVIRFIADNPGVWIMHCHLDAHISWGLAMAFLVENGNGVLQTIEQPPHDLPVC