Gene Details:
- Gene ID: AT2G40160
- Gene Symbol: TBL30
- Gene Name: TRICHOME BIREFRINGENCE-LIKE
- Description: trichome birefringence-like protein (DUF828);(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Function-related keywords:
Literature:
- Arabidopsis ESK1 encodes a novel regulator of freezing tolerance. DOI: 10.1111/j.1365-313X.2006.02994.x ; PMID: 17316173
- TRICHOME BIREFRINGENCE and its homolog AT5G01360 encode plant-specific DUF231 proteins required for cellulose biosynthesis in Arabidopsis. DOI: 10.1104/pp.110.153320 ; PMID: 20388664
- Involvement of TBL/DUF231 proteins into cell wall biology. DOI: 10.4161/psb.5.8.12414 ; PMID: 20657172
- Regiospecific Acetylation of Xylan is Mediated by a Group of DUF231-Containing O-Acetyltransferases. DOI: 10.1093/pcp/pcx147 ; PMID: 29059346
- Molecular Mechanism of Polysaccharide Acetylation by the Arabidopsis Xylan O-acetyltransferase XOAT1. DOI: 10.1105/tpc.20.00028 ; PMID: 32354790
- Genome-wide characterization of trichome birefringence-like genes provides insights into fiber yield improvement. DOI: 10.3389/fpls.2023.1127760 ; PMID: 37008510
Sequences:
cDNA Sequence
- >AT2G40160.1
GCTACATGATTGTAAAAGATGTTGAAGTAGTTGAAGTTAAAACGTTTTGATAGACCAACTACGACCCAACATTCATTAATGTCAAAACCAATTTTCTCATATCGCCAGAAACCGAACACAACGAGATGAAGCAAACTGACGGCAGAGAAAGGAAAGCTTACCTTTCTCTGCTATACTTTGCAGTCATTCTTCTTCCCGTATTCCTTCTCGGATGCTATCTGTACAACGAGAAGCAGCTGAGGGTTGGCCAGTTTCAGGAATTCAATACACATAACCTGCAAGAACACATCACTCCACTACAACAAAGCAAAGAAGATAAAGACAAGAAGACTGATCTTGTTCCATTAGAATTCTGTGATGTTTTCACAGGAAAATGGGTTCTTGATAACGTCACACATCCTTTATACAAAGAAGATGAATGTGAGTTTCTATCAGAGTGGGTGGCTTGTACAAGAAACGGGAGGCCAGACTCTAAGTACCAGAAATGGAGATGGCAACCTCAAGATTGCTCTTTGCCAAGGTTCGACAGTAAGCTGCTGCTAGAGAAACTCAGGGGAAAGAAACTAATGTTCATTGGTGATTCAATACATTACAATCAGTGGCAATCCATGGTTTGTATGGTTCAATCCGTGATTCCCTCAGGCAAAAAGACCTTAAAACACACAGCACAAATGTCCATCTTCAACATAGAGGAGTACAATGCAACCATATCATTTTACTGGGCACCTTTCCTAGTCGAATCAAATGCTGATCCTCCAGACAAGAGAGACGGGAAGACCGATCCAGTAATCATTCCTAATTCAATCTCGAAACACGGCGAGAACTGGAAAGACGCAGACTACCTCATATTCAACACCTACATATGGTGGACTAGACATTCCACGATCAAAGTTCTAAAACAAGAATCTTTCAACAAAGGAGACTCAAAAGAGTACAATGAAATCGGAATCTATATAGTATACAAACAAGTGTTATCAACATGGACAAAATGGCTAGAACAAAACATCAACCCAAGTCAAACATCTATCTTCTTCAGCAGCATGTCACCAACTCATATCAGAAGTTCAGATTGGGGATTCAATGAAGGAAGCAAATGTGAAAAAGAGACAGAACCAATACTAAACATGTCAAAACCAATAAATGTTGGAACAAATCGAAGACTTTACGAAATCGCACTGAATGCGACCAAATCTACAAAAGTGCCGATTCATTTCCTCAACATAACGACTATGTCAGAGTATAGAAAAGATGGGCATACCTCATTTTACGGTTCGATAAATGGGAAACTCATGACGCCGGAGCAGAAGTTAGATCCGAGAACTTTTGCTGATTGTTATCATTGGTGTCTTCCGGGATTGCCTGATTCATGGAACGAGTTGCTCTCTCTGTATATCATCTACAAAATTTAAATGTTTTTTCTGATTGAATGTGAGAATTTGCAAACACCAGATTCCTTCTTCATCGGGAACGTCAAAAAGTCACCGGAAGAGACGAGAGAGCGACGGCGAAGTAGAGAGAACATTCTAAACCGGTTTAGTGTTTTAAATAAAATACCGTGAATTATCGGTTTAGCTGAGAGCGACTATTGCTGAAACCGGTCTAGTCTTACCAAATTTCTACCTATTTTTCCTTTGGTCAACAAACGTTATATCGACAGTCAAATTGCGGTTGGATGTATTTAATACCAAATTATTGAAACCGTTATGTATGATTTGATAACGCATTAAACCGTTTTGTAAGAACAAAATTGAACG - >AT2G40160.2
GCTACATGATTGTAAAAGATGTTGAAGTAGTTGAAGTTAAAACGTTTTGATAGACCAACTACGACCCAACATTCATTAATGTCAAAACCAATTTTCTCATATCGCCAGAAACCGAACACAACGAGATGAAGCAAACTGACGGCAGAGAAAGGAAAGCTTACCTTTCTCTGCTATACTTTGCAGTCATTCTTCTTCCCGTATTCCTTCTCGGATGCTATCTGTACAACGAGAAGCAGCTGAGGGTTGGCCAGTTTCAGGAATTCAATACACATAACCTGCAAGAACACATCACTCCACTACAACAAAGCAAAGAAGATAAAGACAAGAAGACTGATCTTGTTCCATTAGAATTCTGTGATGTTTTCACAGGAAAATGGGTTCTTGATAACGTCACACATCCTTTATACAAAGAAGATGAATGTGAGTTTCTATCAGAGTGGGTGGCTTGTACAAGAAACGGGAGGCCAGACTCTAAGTACCAGAAATGGAGATGGCAACCTCAAGATTGCTCTTTGCCAAGGTTCGACAGTAAGCTGCTGCTAGAGAAACTCAGGGGAAAGAAACTAATGTTCATTGGTGATTCAATACATTACAATCAGTGGCAATCCATGGTTTGTATGGTTCAATCCGTGATTCCCTCAGGCAAAAAGACCTTAAAACACACAGCACAAATGTCCATCTTCAACATAGAGGAGTACAATGCAACCATATCATTTTACTGGGCACCTTTCCTAGTCGAATCAAATGCTGATCCTCCAGACAAGAGAGACGGGAAGACCGATCCAGTAATCATTCCTAATTCAATCTCGAAACACGGCGAGAACTGGAAAGACGCAGACTACCTCATATTCAACACCTACATATGGTGGACTAGACATTCCACGATCAAAGTTCTAAAACAAGAATCTTTCAACAAAGGAGACTCAAAAGAGTACAATGAAATCGGAATCTATATAGTATACAAACAAGTGTTATCAACATGGACAAAATGGCTAGAACAAAACATCAACCCAAGTCAAACATCTATCTTCTTCAGCAGCATGTCACCAACTCATATCAGAAGTTCAGATTGGGGATTCAATGAAGGAAGCAAATGTGAAAAAGAGACAGAACCAATACTAAACATGTCAAAACCAATAAATGTTGGAACAAATCGAAGACTTTACGAAATCGCACTGAATGCGACCAAATCTACAAAAGTGCCGATTCATTTCCTCAACATAACGACTATGTCAGAGTATAGAAAAGATGGGCATACCTCATTTTACGGTTCGATAAATGGGAAACTCATGACGCCGGAGCAGAAGTTAGATCCGAGAACTTTTGCTGATTGTTATCATTGGTGTCTTCCGGGATTGCCTGATTCATGGAACGAGTTGCTCTCTCTGTATATCATCTACAAAATTTAAATGTTTTTTCTGATTGAATGTGAGAATTTGCAAACACCAGATTCCTTCTTCATCGGGAACGTCAAAAAGTCACCGGAAGAGACGAGAGAGCGACGGCGAAGTAGAGAGAACATTCTAAACCGGTTTAGTGTTTTAAATAAAATACCGTGAATTATCGGTTTAGCTGAGAGCGACTATTGCTGAAACCGGTCTAGTCTTACCAAATTTCTACCTATTTTTCCTTTGGTCAACAAACGTTATATCGACAGTCAAATTGCGGTTGGATGTATTTAATACCAAATTATTGAAACCGTTATGTATGATTTGATAACGCATTAAACCGTTTTGTAAGAACAAAATTGAACG - >AT2G40160.3
GCTACATGATTGTAAAAGATGTTGAAGTAGTTGAAGTTAAAACGTTTTGATAGACCAACTACGACCCAACATTCATTAATGTCAAAACCAATTTTCTCATATCGCCAGAAACCGAACACAACGAGATGAAGCAAACTGACGGCAGAGAAAGGAAAGCTTACCTTTCTCTGCTATACTTTGCAGTCATTCTTCTTCCCGTATTCCTTCTCGGATGCTATCTGTACAACGAGAAGCAGCTGAGGGTTGGCCAGTTTCAGGAATTCAATACACATAACCTGCAAGAACACATCACTCCACTACAACAAAGCAAAGAAGATAAAGACAAGAAGACTGATCTTGTTCCATTAGAATTCTGTGATGTTTTCACAGGAAAATGGGTTCTTGATAACGTCACACATCCTTTATACAAAGAAGATGAATGTGAGTTTCTATCAGAGTGGGTGGCTTGTACAAGAAACGGGAGGCCAGACTCTAAGTACCAGAAATGGAGATGGCAACCTCAAGATTGCTCTTTGCCAAGGTTCGACAGTAAGCTGCTGCTAGAGAAACTCAGGGGAAAGAAACTAATGTTCATTGGTGATTCAATACATTACAATCAGTGGCAATCCATGGTTTGTATGGTTCAATCCGTGATTCCCTCAGGCAAAAAGACCTTAAAACACACAGCACAAATGTCCATCTTCAACATAGAGGAGTACAATGCAACCATATCATTTTACTGGGCACCTTTCCTAGTCGAATCAAATGCTGATCCTCCAGACAAGAGAGACGGGAAGACCGATCCAGTAATCATTCCTAATTCAATCTCGAAACACGGCGAGAACTGGAAAGACGCAGACTACCTCATATTCAACACCTACATATGGTGGACTAGACATTCCACGATCAAAGTTCTAAAACAAGAATCTTTCAACAAAGGAGACTCAAAAGAGTACAATGAAATCGGAATCTATATAGTATACAAACAAGTGTTATCAACATGGACAAAATGGCTAGAACAAAACATCAACCCAAGTCAAACATCTATCTTCTTCAGCAGCATGTCACCAACTCATATCAGAAGTTCAGATTGGGGATTCAATGAAGGAAGCAAATGTGAAAAAGAGACAGAACCAATACTAAACATGTCAAAACCAATAAATGTTGGAACAAATCGAAGACTTTACGAAATCGCACTGAATGCGACCAAATCTACAAAAGTGCCGATTCATTTCCTCAACATAACGACTATGTCAGAGTATAGAAAAGATGGGCATACCTCATTTTACGGTTCGATAAATGGGAAACTCATGACGCCGGAGCAGAAGTTAGATCCGAGAACTTTTGCTGATTGTTATCATTGGTGTCTTCCGGGATTGCCTGATTCATGGAACGAGTTGCTCTCTCTGTATATCATCTACAAAATTTAAATGTTTTTTCTGATTGAATGTGAGAATTTGCAAACACCAGATTCCTTCTTCATCGGGAACGTCAAAAAGTCACCGGAAGAGACGAGAGAGCGACGGCGAAGTAGAGAGAACATTCTAAACCGGTTTAGTGTTTTAAATAAAATACCGTGAATTATCGGTTTAGCTGAGAGCGACTATTGCTGAAACCGGTCTAGTCTTACCAAATTTCTACCTATTTTTCCTTTGGTCAACAAACGTTATATCGACAGTCAAATTGCGGTTGGATGTATTTAATACCAAATTATTGAAACCGTTATGTATGATTTGATAACGCATTAAACCGTTTTGTAAGAACAAAATTGAACG
CDS Sequence
- >AT2G40160.1
ATGAAGCAAACTGACGGCAGAGAAAGGAAAGCTTACCTTTCTCTGCTATACTTTGCAGTCATTCTTCTTCCCGTATTCCTTCTCGGATGCTATCTGTACAACGAGAAGCAGCTGAGGGTTGGCCAGTTTCAGGAATTCAATACACATAACCTGCAAGAACACATCACTCCACTACAACAAAGCAAAGAAGATAAAGACAAGAAGACTGATCTTGTTCCATTAGAATTCTGTGATGTTTTCACAGGAAAATGGGTTCTTGATAACGTCACACATCCTTTATACAAAGAAGATGAATGTGAGTTTCTATCAGAGTGGGTGGCTTGTACAAGAAACGGGAGGCCAGACTCTAAGTACCAGAAATGGAGATGGCAACCTCAAGATTGCTCTTTGCCAAGGTTCGACAGTAAGCTGCTGCTAGAGAAACTCAGGGGAAAGAAACTAATGTTCATTGGTGATTCAATACATTACAATCAGTGGCAATCCATGGTTTGTATGGTTCAATCCGTGATTCCCTCAGGCAAAAAGACCTTAAAACACACAGCACAAATGTCCATCTTCAACATAGAGGAGTACAATGCAACCATATCATTTTACTGGGCACCTTTCCTAGTCGAATCAAATGCTGATCCTCCAGACAAGAGAGACGGGAAGACCGATCCAGTAATCATTCCTAATTCAATCTCGAAACACGGCGAGAACTGGAAAGACGCAGACTACCTCATATTCAACACCTACATATGGTGGACTAGACATTCCACGATCAAAGTTCTAAAACAAGAATCTTTCAACAAAGGAGACTCAAAAGAGTACAATGAAATCGGAATCTATATAGTATACAAACAAGTGTTATCAACATGGACAAAATGGCTAGAACAAAACATCAACCCAAGTCAAACATCTATCTTCTTCAGCAGCATGTCACCAACTCATATCAGAAGTTCAGATTGGGGATTCAATGAAGGAAGCAAATGTGAAAAAGAGACAGAACCAATACTAAACATGTCAAAACCAATAAATGTTGGAACAAATCGAAGACTTTACGAAATCGCACTGAATGCGACCAAATCTACAAAAGTGCCGATTCATTTCCTCAACATAACGACTATGTCAGAGTATAGAAAAGATGGGCATACCTCATTTTACGGTTCGATAAATGGGAAACTCATGACGCCGGAGCAGAAGTTAGATCCGAGAACTTTTGCTGATTGTTATCATTGGTGTCTTCCGGGATTGCCTGATTCATGGAACGAGTTGCTCTCTCTGTATATCATCTACAAAATTTAA - >AT2G40160.2
ATGAAGCAAACTGACGGCAGAGAAAGGAAAGCTTACCTTTCTCTGCTATACTTTGCAGTCATTCTTCTTCCCGTATTCCTTCTCGGATGCTATCTGTACAACGAGAAGCAGCTGAGGGTTGGCCAGTTTCAGGAATTCAATACACATAACCTGCAAGAACACATCACTCCACTACAACAAAGCAAAGAAGATAAAGACAAGAAGACTGATCTTGTTCCATTAGAATTCTGTGATGTTTTCACAGGAAAATGGGTTCTTGATAACGTCACACATCCTTTATACAAAGAAGATGAATGTGAGTTTCTATCAGAGTGGGTGGCTTGTACAAGAAACGGGAGGCCAGACTCTAAGTACCAGAAATGGAGATGGCAACCTCAAGATTGCTCTTTGCCAAGGTTCGACAGTAAGCTGCTGCTAGAGAAACTCAGGGGAAAGAAACTAATGTTCATTGGTGATTCAATACATTACAATCAGTGGCAATCCATGGTTTGTATGGTTCAATCCGTGATTCCCTCAGGCAAAAAGACCTTAAAACACACAGCACAAATGTCCATCTTCAACATAGAGGAGTACAATGCAACCATATCATTTTACTGGGCACCTTTCCTAGTCGAATCAAATGCTGATCCTCCAGACAAGAGAGACGGGAAGACCGATCCAGTAATCATTCCTAATTCAATCTCGAAACACGGCGAGAACTGGAAAGACGCAGACTACCTCATATTCAACACCTACATATGGTGGACTAGACATTCCACGATCAAAGTTCTAAAACAAGAATCTTTCAACAAAGGAGACTCAAAAGAGTACAATGAAATCGGAATCTATATAGTATACAAACAAGTGTTATCAACATGGACAAAATGGCTAGAACAAAACATCAACCCAAGTCAAACATCTATCTTCTTCAGCAGCATGTCACCAACTCATATCAGAAGTTCAGATTGGGGATTCAATGAAGGAAGCAAATGTGAAAAAGAGACAGAACCAATACTAAACATGTCAAAACCAATAAATGTTGGAACAAATCGAAGACTTTACGAAATCGCACTGAATGCGACCAAATCTACAAAAGTGCCGATTCATTTCCTCAACATAACGACTATGTCAGAGTATAGAAAAGATGGGCATACCTCATTTTACGGTTCGATAAATGGGAAACTCATGACGCCGGAGCAGAAGTTAGATCCGAGAACTTTTGCTGATTGTTATCATTGGTGTCTTCCGGGATTGCCTGATTCATGGAACGAGTTGCTCTCTCTGTATATCATCTACAAAATTTAA - >AT2G40160.3
ATGAAGCAAACTGACGGCAGAGAAAGGAAAGCTTACCTTTCTCTGCTATACTTTGCAGTCATTCTTCTTCCCGTATTCCTTCTCGGATGCTATCTGTACAACGAGAAGCAGCTGAGGGTTGGCCAGTTTCAGGAATTCAATACACATAACCTGCAAGAACACATCACTCCACTACAACAAAGCAAAGAAGATAAAGACAAGAAGACTGATCTTGTTCCATTAGAATTCTGTGATGTTTTCACAGGAAAATGGGTTCTTGATAACGTCACACATCCTTTATACAAAGAAGATGAATGTGAGTTTCTATCAGAGTGGGTGGCTTGTACAAGAAACGGGAGGCCAGACTCTAAGTACCAGAAATGGAGATGGCAACCTCAAGATTGCTCTTTGCCAAGGTTCGACAGTAAGCTGCTGCTAGAGAAACTCAGGGGAAAGAAACTAATGTTCATTGGTGATTCAATACATTACAATCAGTGGCAATCCATGGTTTGTATGGTTCAATCCGTGATTCCCTCAGGCAAAAAGACCTTAAAACACACAGCACAAATGTCCATCTTCAACATAGAGGAGTACAATGCAACCATATCATTTTACTGGGCACCTTTCCTAGTCGAATCAAATGCTGATCCTCCAGACAAGAGAGACGGGAAGACCGATCCAGTAATCATTCCTAATTCAATCTCGAAACACGGCGAGAACTGGAAAGACGCAGACTACCTCATATTCAACACCTACATATGGTGGACTAGACATTCCACGATCAAAGTTCTAAAACAAGAATCTTTCAACAAAGGAGACTCAAAAGAGTACAATGAAATCGGAATCTATATAGTATACAAACAAGTGTTATCAACATGGACAAAATGGCTAGAACAAAACATCAACCCAAGTCAAACATCTATCTTCTTCAGCAGCATGTCACCAACTCATATCAGAAGTTCAGATTGGGGATTCAATGAAGGAAGCAAATGTGAAAAAGAGACAGAACCAATACTAAACATGTCAAAACCAATAAATGTTGGAACAAATCGAAGACTTTACGAAATCGCACTGAATGCGACCAAATCTACAAAAGTGCCGATTCATTTCCTCAACATAACGACTATGTCAGAGTATAGAAAAGATGGGCATACCTCATTTTACGGTTCGATAAATGGGAAACTCATGACGCCGGAGCAGAAGTTAGATCCGAGAACTTTTGCTGATTGTTATCATTGGTGTCTTCCGGGATTGCCTGATTCATGGAACGAGTTGCTCTCTCTGTATATCATCTACAAAATTTAA
Protein Sequence
- >AT2G40160.1
MKQTDGRERKAYLSLLYFAVILLPVFLLGCYLYNEKQLRVGQFQEFNTHNLQEHITPLQQSKEDKDKKTDLVPLEFCDVFTGKWVLDNVTHPLYKEDECEFLSEWVACTRNGRPDSKYQKWRWQPQDCSLPRFDSKLLLEKLRGKKLMFIGDSIHYNQWQSMVCMVQSVIPSGKKTLKHTAQMSIFNIEEYNATISFYWAPFLVESNADPPDKRDGKTDPVIIPNSISKHGENWKDADYLIFNTYIWWTRHSTIKVLKQESFNKGDSKEYNEIGIYIVYKQVLSTWTKWLEQNINPSQTSIFFSSMSPTHIRSSDWGFNEGSKCEKETEPILNMSKPINVGTNRRLYEIALNATKSTKVPIHFLNITTMSEYRKDGHTSFYGSINGKLMTPEQKLDPRTFADCYHWCLPGLPDSWNELLSLYIIYKI - >AT2G40160.2
MKQTDGRERKAYLSLLYFAVILLPVFLLGCYLYNEKQLRVGQFQEFNTHNLQEHITPLQQSKEDKDKKTDLVPLEFCDVFTGKWVLDNVTHPLYKEDECEFLSEWVACTRNGRPDSKYQKWRWQPQDCSLPRFDSKLLLEKLRGKKLMFIGDSIHYNQWQSMVCMVQSVIPSGKKTLKHTAQMSIFNIEEYNATISFYWAPFLVESNADPPDKRDGKTDPVIIPNSISKHGENWKDADYLIFNTYIWWTRHSTIKVLKQESFNKGDSKEYNEIGIYIVYKQVLSTWTKWLEQNINPSQTSIFFSSMSPTHIRSSDWGFNEGSKCEKETEPILNMSKPINVGTNRRLYEIALNATKSTKVPIHFLNITTMSEYRKDGHTSFYGSINGKLMTPEQKLDPRTFADCYHWCLPGLPDSWNELLSLYIIYKI - >AT2G40160.3
MKQTDGRERKAYLSLLYFAVILLPVFLLGCYLYNEKQLRVGQFQEFNTHNLQEHITPLQQSKEDKDKKTDLVPLEFCDVFTGKWVLDNVTHPLYKEDECEFLSEWVACTRNGRPDSKYQKWRWQPQDCSLPRFDSKLLLEKLRGKKLMFIGDSIHYNQWQSMVCMVQSVIPSGKKTLKHTAQMSIFNIEEYNATISFYWAPFLVESNADPPDKRDGKTDPVIIPNSISKHGENWKDADYLIFNTYIWWTRHSTIKVLKQESFNKGDSKEYNEIGIYIVYKQVLSTWTKWLEQNINPSQTSIFFSSMSPTHIRSSDWGFNEGSKCEKETEPILNMSKPINVGTNRRLYEIALNATKSTKVPIHFLNITTMSEYRKDGHTSFYGSINGKLMTPEQKLDPRTFADCYHWCLPGLPDSWNELLSLYIIYKI