Gene Details:

• Gene ID: AT2G40140
• Gene Symbol: AtC3H29, ATSZF2, CZF1, SZF2, TZF10, ZFAR1
• Gene Name: (SALT-INDUCIBLE ZINC FINGER 2, TANDEM ZINC FINGER 10
• Description: zinc finger (CCCH-type) family protein;(source:Araport11)
• TAIR Accession:
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT2G40140.1     AT2G40140.2

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009029  — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020030  — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0025281  — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)

Germplasm Phenotype:

• SAIL_207_G08  — Increased susceptibility to Botrytis infection.
• SALK_024800  — Increased susceptibility to Botrytis infection.

Function-related keywords:

• shoot axis apex ,  leaf lamina base ,  root ,  shoot system ,  plant embryo ,  vascular leaf ,  stamen ,  sepal ,  flower ,  inflorescence flower pedicel ,  cotyledon ,  petiole ,  hypocotyl ,  leaf apex ,  collective leaf structure ,  pollen

Literature:

• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• Identification of unstable transcripts in Arabidopsis by cDNA microarray and specific clock-controlled genes.   DOI:  10.1073/pnas.152204099 ;  PMID:  12167669
• Diverse RNA viruses elicit the expression of common sets of genes in susceptible Arabidopsis thaliana plants.   DOI:  10.1046/j.1365-313x.2003.01625.x ;  PMID:  12535341
• Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis.   DOI:  10.1104/pp.103.034736 ;  PMID:  15047898
• Plant body weight-induced secondary growth in Arabidopsis and its transcription phenotype revealed by whole-transcriptome profiling.   DOI:  10.1104/pp.104.038844 ;  PMID:  15194820
• Cesium toxicity in Arabidopsis.   DOI:  10.1104/pp.104.046672 ;  PMID:  15489280
• Roles of the CBF2 and ZAT12 transcription factors in configuring the low temperature transcriptome of Arabidopsis.   DOI:  10.1111/j.1365-313X.2004.02288.x ;  PMID:  15634197
• Transcriptional divergence of the duplicated oxidative stress-responsive genes in the Arabidopsis genome.   DOI:  10.1111/j.1365-313X.2004.02295.x ;  PMID:  15634198
• The zinc-finger protein Zat12 plays a central role in reactive oxygen and abiotic stress signaling in Arabidopsis.   DOI:  10.1104/pp.105.068254 ;  PMID:  16183833
• The cold-induced early activation of phospholipase C and D pathways determines the response of two distinct clusters of genes in Arabidopsis cell suspensions.   DOI:  10.1104/pp.105.068171 ;  PMID:  16258011
• Calmodulin interacts with and regulates the RNA-binding activity of an Arabidopsis polyadenylation factor subunit.   DOI:  10.1104/pp.105.070672 ;  PMID:  16500995
• Type III effectors orchestrate a complex interplay between transcriptional networks to modify basal defence responses during pathogenesis and resistance.   DOI:  10.1111/j.1365-313X.2006.02672.x ;  PMID:  16553893
• Transposon-mediated expansion and diversification of a family of ULP-like genes.   DOI:  10.1093/molbev/msk015 ;  PMID:  16581939
• Expression profiling and mutant analysis reveals complex regulatory networks involved in Arabidopsis response to Botrytis infection.   DOI:  10.1111/j.1365-313X.2006.02849.x ;  PMID:  16925600
• Rapid transcriptome changes induced by cytosolic Ca2+ transients reveal ABRE-related sequences as Ca2+-responsive cis elements in Arabidopsis.   DOI:  10.1105/tpc.106.042713 ;  PMID:  16980540
• A high-performance, small-scale microarray for expression profiling of many samples in Arabidopsis-pathogen studies.   DOI:  10.1111/j.1365-313X.2006.02972.x ;  PMID:  17181774
• The genetic basis of zinc tolerance in the metallophyte Arabidopsis halleri ssp. halleri (Brassicaceae): an analysis of quantitative trait loci.   DOI:  10.1534/genetics.106.064485 ;  PMID:  17409091
• The CCCH-type zinc finger proteins AtSZF1 and AtSZF2 regulate salt stress responses in Arabidopsis.   DOI:  10.1093/pcp/pcm088 ;  PMID:  17609218
• Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor.   DOI:  10.1094/MPMI-20-8-0900 ;  PMID:  17722694
• Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice.   DOI:  10.1186/1471-2164-9-44 ;  PMID:  18221561
• SOMNUS, a CCCH-type zinc finger protein in Arabidopsis, negatively regulates light-dependent seed germination downstream of PIL5.   DOI:  10.1105/tpc.108.058859 ;  PMID:  18487351
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Arabidopsis transcriptome reveals control circuits regulating redox homeostasis and the role of an AP2 transcription factor.   DOI:  10.1104/pp.108.128488 ;  PMID:  18829981
• Regulation of Arabidopsis defense responses against Spodoptera littoralis by CPK-mediated calcium signaling.   DOI:  10.1186/1471-2229-10-97 ;  PMID:  20504319
• PRR5, 7 and 9 positively modulate TOR signaling-mediated root cell proliferation by repressing TANDEM ZINC FINGER 1 in Arabidopsis.   DOI:  10.1093/nar/gkz191 ;  PMID:  30892623
• Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress.   DOI:  10.1105/tpc.19.00463 ;  PMID:  31519798
• Noncanonical mono(ADP-ribosyl)ation of zinc finger SZF proteins counteracts ubiquitination for protein homeostasis in plant immunity.   DOI:  10.1016/j.molcel.2021.09.006 ;  PMID:  34592134
• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• The cold-induced early activation of phospholipase C and D pathways determines the response of two distinct clusters of genes in Arabidopsis cell suspensions.   DOI:  10.1104/pp.105.068171 ;  PMID:  16258011
• Expression profiling and mutant analysis reveals complex regulatory networks involved in Arabidopsis response to Botrytis infection.   DOI:  10.1111/j.1365-313X.2006.02849.x ;  PMID:  16925600
• The CCCH-type zinc finger proteins AtSZF1 and AtSZF2 regulate salt stress responses in Arabidopsis.   DOI:  10.1093/pcp/pcm088 ;  PMID:  17609218
• Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor.   DOI:  10.1094/MPMI-20-8-0900 ;  PMID:  17722694
• Expression profiling and mutant analysis reveals complex regulatory networks involved in Arabidopsis response to Botrytis infection.   DOI:  10.1111/j.1365-313X.2006.02849.x ;  PMID:  16925600

Sequences: