Information report for AT2G39970
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen
Literature and News
- Developmental analysis of a putative ATP/ADP carrier protein localized on glyoxysomal membranes during the peroxisome transition in pumpkin cotyledons. DOI: 10.1093/pcp/pce108 ; PMID: 11522909
- Functional differentiation of peroxisomes revealed by expression profiles of peroxisomal genes in Arabidopsis thaliana. DOI: 10.1093/pcp/pcg173 ; PMID: 14701923
- The growing family of mitochondrial carriers in Arabidopsis. DOI: 10.1016/j.tplants.2004.01.007 ; PMID: 15003237
- Folate metabolism in plants: an Arabidopsis homolog of the mammalian mitochondrial folate transporter mediates folate import into chloroplasts. DOI: 10.1074/jbc.M506045200 ; PMID: 16055441
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Novel proteins, putative membrane transporters, and an integrated metabolic network are revealed by quantitative proteomic analysis of Arabidopsis cell culture peroxisomes. DOI: 10.1104/pp.108.129999 ; PMID: 18931141
- A peroxisomal carrier delivers NAD⁺ and contributes to optimal fatty acid degradation during storage oil mobilization. DOI: 10.1111/j.1365-313X.2011.04775.x ; PMID: 21895810
- A defect of peroxisomal membrane protein 38 causes enlargement of peroxisomes. DOI: 10.1093/pcp/pcr147 ; PMID: 22034551
- The peroxisomal NAD+ carrier of Arabidopsis thaliana transports coenzyme A and its derivatives. DOI: 10.1007/s10863-012-9445-0 ; PMID: 22555559
- The Peroxisomal NAD Carrier from Arabidopsis Imports NAD in Exchange with AMP. DOI: 10.1104/pp.16.00540 ; PMID: 27208243
- The Roles of β-Oxidation and Cofactor Homeostasis in Peroxisome Distribution and Function in Arabidopsis thaliana. DOI: 10.1534/genetics.116.193169 ; PMID: 27605050
- The mitochondrial NAD(+) transporter (NDT1) plays important roles in cellular NAD(+) homeostasis in Arabidopsis thaliana. DOI: 10.1111/tpj.14452 ; PMID: 31278825
- Developmental analysis of a putative ATP/ADP carrier protein localized on glyoxysomal membranes during the peroxisome transition in pumpkin cotyledons. DOI: 10.1093/pcp/pce108 ; PMID: 11522909
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
Gene Resources
- UniProt: A0A178VUN6
- EMBL: CACRSJ010000105, CACSHJ010000088, LUHQ01000002
- AlphaFoldDB: A0A178VUN6
- EnsemblPlants: AT2G39970.1
- Gramene: AT2G39970.1
- KEGG: ath:AT2G39970
- Orthologous matrix: QFMMYEL
- ExpressionAtlas: AT2G39970
- InterPro: IPR018108, IPR023395, IPR044712
- PANTHER: PTHR45683
- SUPFAM: SSF103506
- PROSITE: PS50920
- Gene3D: 1.50.40.10
- OrthoDB: A0A178VUN6
- SWISS-MODEL: A0A178VUN6
Homologs
- Malus domestica MDP0000229755, MDP0000322264, MDP0000216605
- Oryza sativa OsBT1-2, OsBT1-1;OsBT1, OsBT1-3, OsPAPST1, OsUCP2
- Prunus avium Pav_sc0001411.1_g200.1.mk
- Triticum aestivum TaBT1-6B, TaBT1-6D, TaBT1-6A
Sequences
cDNA Sequence
- >AT2G39970.1
AAAAAGAGTCTTATCCAGCTAAACCAAACTAGTAGTACATGGAAGGTTAGGCTTCCGTAATATCACTCAATTATAAGGGCATATCAGTCAATTACATACCTCCTACACTCCTCATTCCTCAACGTCAACTTGCGTGTCTTTCTTTCTTCGAATGAACTTCTGAAGCGAAAAAAAGAGAGAATTAAAGTCATTCATTATTTGGGGAATGGAGAAGAAGCTCCTTTCCTACAGACGCCATCATTAACAACATCCTCTTAAGCTTCTGCGATTCTCTCCGTTTGTCGGAAGATTTCACGACGATTCTTCAATCCTTATCCGAACCGGAGAAATCATGTCGGACGCTTTGATCAATGGATTGGCTGGAGCTGGTGGTGGGATCATTGCTCAGCTTCTCACTTATCCTCTTCAAACTGTAAATACGCGCCAACAGACGGAGCGGGATCTGAAGAGGGAGAAGAGGAAACTTGGAACTATCGAACACATGTGTCAGGTTGTCAAACAAGAAGGATGGGAGAGGTTATATGGTGGATTGGCGCCGTCTCTTGCTGGAACGGCTGCATCACAGGGTGTGTACTACTACTTCTACCAAGTGTTTCGGAATCGAGCTGAAGCCACAGCTCTTGCACGGAAGAAGAAAGGTTTGGGTGACGGATCAGTTGGGATGTTTGCTTCACTTTTAGTGGCTGCCTTTGCCGGATCGGTTAATGTTCTTATGACGAATCCGATTTGGGTGATTGTTACGCGTATGCAGACCCACAGAAAAATGACAAAAGATCAAACAGCGGCCCCCGAGTCACCTTCTTCTAATGCAGAAGCTCTGGTTGCTGTTGAGCCGCGTCCATATGGGACCTTTAATACGATTCGAGAGGTTTACGATGAAGCTGGAATAACTGGCTTCTGGAAAGGTGTAATTCCAACATTGATCATGGTAAGTAATCCGTCAATGCAATTTATGTTGTACGAGACAATGCTAACCAAGCTGAAGAAAAAGCGTGCCTTGAAGGGTAGCAACAACGTTACCGCTTTGGAGACATTTCTTCTCGGAGCTGTGGCGAAACTCGGAGCTACAGTCACAACTTACCCTCTCTTGGTTGTAAAGTCGCGACTTCAAGCCAAACAGGTCACAACAGGGGACAAAAGACAACAATACAAAGGAACATTGGACGCGATTCTGAAAATGATTCGATATGAAGGGCTTTACGGGTTTTATAAAGGGATGAGCACAAAGATTGTGCAGAGCGTTTTAGCTGCTGCGGTTCTGTTCATGATCAAGGAAGAGCTTGTCAAGGGAGCTAAGCTGTTGCTCTCAAACGCTACCTCTAGCTAAGTCAAGTCCAAGCCTTCTTGAATGAACGCTAGTAGTTAGAAATAAATAAAAATAGATTAAATTTCCAATAGTTTTCTTGATTAATTATTACACTATTGGGATTGTTGTTCATTTCCTGATGATTGCAATTGATTATTGTAATTTCTGCAAGATTCTTTAGTAATGAAATCTGAATAAAGTTTGGCAGATTTCCT
CDS Sequence
- >AT2G39970.1
ATGTCGGACGCTTTGATCAATGGATTGGCTGGAGCTGGTGGTGGGATCATTGCTCAGCTTCTCACTTATCCTCTTCAAACTGTAAATACGCGCCAACAGACGGAGCGGGATCTGAAGAGGGAGAAGAGGAAACTTGGAACTATCGAACACATGTGTCAGGTTGTCAAACAAGAAGGATGGGAGAGGTTATATGGTGGATTGGCGCCGTCTCTTGCTGGAACGGCTGCATCACAGGGTGTGTACTACTACTTCTACCAAGTGTTTCGGAATCGAGCTGAAGCCACAGCTCTTGCACGGAAGAAGAAAGGTTTGGGTGACGGATCAGTTGGGATGTTTGCTTCACTTTTAGTGGCTGCCTTTGCCGGATCGGTTAATGTTCTTATGACGAATCCGATTTGGGTGATTGTTACGCGTATGCAGACCCACAGAAAAATGACAAAAGATCAAACAGCGGCCCCCGAGTCACCTTCTTCTAATGCAGAAGCTCTGGTTGCTGTTGAGCCGCGTCCATATGGGACCTTTAATACGATTCGAGAGGTTTACGATGAAGCTGGAATAACTGGCTTCTGGAAAGGTGTAATTCCAACATTGATCATGGTAAGTAATCCGTCAATGCAATTTATGTTGTACGAGACAATGCTAACCAAGCTGAAGAAAAAGCGTGCCTTGAAGGGTAGCAACAACGTTACCGCTTTGGAGACATTTCTTCTCGGAGCTGTGGCGAAACTCGGAGCTACAGTCACAACTTACCCTCTCTTGGTTGTAAAGTCGCGACTTCAAGCCAAACAGGTCACAACAGGGGACAAAAGACAACAATACAAAGGAACATTGGACGCGATTCTGAAAATGATTCGATATGAAGGGCTTTACGGGTTTTATAAAGGGATGAGCACAAAGATTGTGCAGAGCGTTTTAGCTGCTGCGGTTCTGTTCATGATCAAGGAAGAGCTTGTCAAGGGAGCTAAGCTGTTGCTCTCAAACGCTACCTCTAGCTAA
Protein Sequence
- >AT2G39970.1
MSDALINGLAGAGGGIIAQLLTYPLQTVNTRQQTERDLKREKRKLGTIEHMCQVVKQEGWERLYGGLAPSLAGTAASQGVYYYFYQVFRNRAEATALARKKKGLGDGSVGMFASLLVAAFAGSVNVLMTNPIWVIVTRMQTHRKMTKDQTAAPESPSSNAEALVAVEPRPYGTFNTIREVYDEAGITGFWKGVIPTLIMVSNPSMQFMLYETMLTKLKKKRALKGSNNVTALETFLLGAVAKLGATVTTYPLLVVKSRLQAKQVTTGDKRQQYKGTLDAILKMIRYEGLYGFYKGMSTKIVQSVLAAAVLFMIKEELVKGAKLLLSNATSS