Gene Details:

• Gene ID: AT2G39885
• Gene Symbol: AT-MIR393A, MIR393A
• Gene Name: microRNA393A
• Description: microRNA ath-MIR393a precursor;(source:Araport11)
• TAIR Accession:
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT2G39885.1

Plant Ontology Annotations:

• PO:0000003  — whole plant — planta entera (Spanish, exact), 植物体全体 (Japanese, exact), clonal colony (related), colony (related), bush (narrow), frutex (narrow), frutices (narrow), gametophyte (narrow), herb (narrow), liana (narrow), prothalli (narrow), prothallium (narrow), prothallus (narrow), seedling (narrow), shrub (narrow), sporophyte (narrow), suffrutex (narrow), suffrutices (narrow), tree (narrow), vine (narrow), woody clump (narrow), genet (broad), ramet (broad)
• PO:0000014  — rosette leaf — hoja en roseta (Spanish, exact), ロゼット葉 (Japanese, exact)
• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)

Germplasm Phenotype:

• miR393a-1/miR393b-1  — Epinastic leaves, reduced expression of DR5pro:GUS auxin reporter, decreased degradation of AXR3-NT:GUS reporter.

Function-related keywords:

• whole plant ,  rosette leaf ,  root ,  flower

Literature:

• Computational identification of plant microRNAs and their targets, including a stress-induced miRNA.   DOI:  10.1016/j.molcel.2004.05.027 ;  PMID:  15200956
• ASRP: the Arabidopsis Small RNA Project Database.   DOI:  10.1093/nar/gki127 ;  PMID:  15608278
• A plant miRNA contributes to antibacterial resistance by repressing auxin signaling.   DOI:  10.1126/science.1126088 ;  PMID:  16627744
• Gene structures and processing of Arabidopsis thaliana HYL1-dependent pri-miRNAs.   DOI:  10.1093/nar/gkp189 ;  PMID:  19304749
• Nitrate-responsive miR393/AFB3 regulatory module controls root system architecture in Arabidopsis thaliana.   DOI:  10.1073/pnas.0909571107 ;  PMID:  20142497
• Regulation of auxin response by miR393-targeted transport inhibitor response protein 1 is involved in normal development in Arabidopsis.   DOI:  10.1007/s11103-011-9838-1 ;  PMID:  22042293
• A plant microRNA regulates the adaptation of roots to drought stress.   DOI:  10.1016/j.febslet.2012.05.013 ;  PMID:  22613571
• miR393 is required for production of proper auxin signalling outputs.   DOI:  10.1371/journal.pone.0095972 ;  PMID:  24763336
• Hydrogen sulfide regulates abiotic stress tolerance and biotic stress resistance in Arabidopsis.   DOI:  10.1111/jipb.12302 ;  PMID:  25329496
• miR393 contributes to the embryogenic transition induced in vitro in Arabidopsis via the modification of the tissue sensitivity to auxin treatment.   DOI:  10.1007/s00425-016-2505-7 ;  PMID:  27040841
• miR393 inhibits in vitro shoot regeneration in Arabidopsis thaliana via repressing TIR1.   DOI:  10.1016/j.plantsci.2017.10.009 ;  PMID:  29241559
• Rewiring of auxin signaling under persistent shade.   DOI:  10.1073/pnas.1721110115 ;  PMID:  29724856
• miR393s regulate salt stress response pathway in Arabidopsis thaliana through scaffold protein RACK1A mediated ABA signaling pathways.   DOI:  10.1080/15592324.2019.1600394 ;  PMID:  31021701

Sequences: