Information report for AT2G39700
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000025 — root tip — punta de la raíz (Spanish, exact), 根端 (Japanese, exact)
- PO:0020121 — lateral root — raíz lateral (Spanish, exact), 側根 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Functional Keywords
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , root tip , lateral root , pollen tube cell , pollen
Literature and News
- Expansins: ever-expanding numbers and functions. DOI: 10.1016/s1369-5266(00)00211-9 ; PMID: 11641069
- Plant expansins are a complex multigene family with an ancient evolutionary origin. DOI: 10.1104/pp.010658 ; PMID: 11891242
- Cell cycle-regulated gene expression in Arabidopsis. DOI: 10.1074/jbc.M207570200 ; PMID: 12169696
- Microarray expression analyses of Arabidopsis guard cells and isolation of a recessive abscisic acid hypersensitive protein phosphatase 2C mutant. DOI: 10.1105/tpc.019000 ; PMID: 14973164
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- Co-immunoprecipitation of Hsp101 with cytosolic Hsc70. DOI: 10.1016/j.plaphy.2004.10.006 ; PMID: 15763661
- The xylem and phloem transcriptomes from secondary tissues of the Arabidopsis root-hypocotyl. DOI: 10.1104/pp.105.060202 ; PMID: 15923329
- Gene trap lines define domains of gene regulation in Arabidopsis petals and stamens. DOI: 10.1105/tpc.105.033985 ; PMID: 16055634
- Transcriptome analysis reveals specific modulation of abscisic acid signaling by ROP10 small GTPase in Arabidopsis. DOI: 10.1104/pp.105.068064 ; PMID: 16258012
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- Biosynthesis of cellulose-enriched tension wood in Populus: global analysis of transcripts and metabolites identifies biochemical and developmental regulators in secondary wall biosynthesis. DOI: 10.1111/j.1365-313X.2005.02584.x ; PMID: 16367961
- Expansins are involved in the formation of nematode-induced syncytia in roots of Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2006.02856.x ; PMID: 16942607
- Genome-wide expression profiling of ARABIDOPSIS RESPONSE REGULATOR 7(ARR7) overexpression in cytokinin response. DOI: 10.1007/s00438-006-0177-x ; PMID: 17061125
- Arabidopsis transcriptome changes in response to phloem-feeding silverleaf whitefly nymphs. Similarities and distinctions in responses to aphids. DOI: 10.1104/pp.106.090662 ; PMID: 17189325
- Rhizobacterial volatile emissions regulate auxin homeostasis and cell expansion in Arabidopsis. DOI: 10.1007/s00425-007-0530-2 ; PMID: 17497164
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Growth modulation effects of CBM2a under the control of AtEXP4 and CaMV35S promoters in Arabidopsis thaliana, Nicotiana tabacum and Eucalyptus camaldulensis. DOI: 10.1007/s11248-017-0015-4 ; PMID: 28349287
- Cell division and turgor mediate enhanced plant growth in Arabidopsis plants treated with the bacterial signalling molecule lumichrome. DOI: 10.1007/s00425-018-2916-8 ; PMID: 29777364
- Two Expansin Genes, AtEXPA4 and AtEXPB5, Are Redundantly Required for Pollen Tube Growth and AtEXPA4 Is Involved in Primary Root Elongation in Arabidopsis thaliana. DOI: 10.3390/genes12020249 ; PMID: 33578704
- Expansins: ever-expanding numbers and functions. DOI: 10.1016/s1369-5266(00)00211-9 ; PMID: 11641069
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
Gene Resources
- UniProt: A0A178VRH0
- EMBL: CACRSJ010000105, CACSHJ010000088, LR881467
- AlphaFoldDB: A0A178VRH0
- EnsemblPlants: AT2G39700.1
- Gramene: AT2G39700.1
- KEGG: ath:AT2G39700
- Orthologous matrix: IRIMMAR
- ExpressionAtlas: AT2G39700
- InterPro: IPR002963, IPR007112, IPR007117
- PANTHER: PTHR31867
- SUPFAM: SSF49590, SSF50685
- PROSITE: PS50842, PS50843
- Gene3D: 2.40.40.10, 2.60.40.760
- OrthoDB: A0A178VRH0
- SWISS-MODEL: A0A178VRH0
- Conserved Domain Database: cd22274
Homologs
Sequences
cDNA Sequence
- >AT2G39700.1
CCTACCTCCACCTTACGTAGAAATAGTAATCTTATTTTAAAAGTTTTAACTTTGACAAAAGGAAATTAAAATTTAGCCAATTATCTCTCGATCTCTCTCTCTCACTCTAACTTTGGAGTTTCCTTCCCTCCATAAATACCGAACCTCACTCCTTCTTCCTCCACCATCCTCATCTCTCAATCAACAAACCTAACTCTTTCTCTATACAAGAGCGCAAGCTCGAAGGCGCTCTTGTTCTTTCTTCATTTTCTCCTTAACAATCACCCTCATAGTAACTTTAAAACTCTCTGTTTCTAGTAATTCACACACAAAATGGCTATTAAACTAGCAATTCTATTTACCACATTTGTTCTTTTTAGCCTCGCCGACGCTAGAATCCCCGGTATTTACTCCGGCGGCGCATGGCAAAACGCACACGCCACTTTTTACGGTGGCAGCGACGCCTCCGGCACAATGGGAGGAGCTTGTGGTTACGGTAACCTATACAGCCAAGGGTACGGGACCAACACGGCTGCTTTGAGTACGGCGCTGTTTAACAATGGTATGAGTTGTGGAGCCTGCTTTGAGCTAAAATGCGCCAACGACCCTCAATGGTGTCACTCAGGTAGTCCTTCGATCCTCATCACCGCAACCAATTTCTGCCCACCAAACTTGGCTCAGCCTAGCGACAACGGAGGATGGTGCAACCCACCACGTGAACACTTTGACCTAGCCATGCCTGTCTTCCTTAAGATCGCTCAATATCGCGCCGGCATTGTCCCCGTCTCATACCGCAGGGTGCCATGTAGAAAGAGAGGAGGCATAAGGTTCACAATCAACGGTCACCGTTACTTCAACTTGGTTCTGATCACTAACGTGGCTGGAGCAGGAGACATCGTGAGGGCTAGTGTGAAAGGATCACGGACTGGTTGGATGAGTTTGAGCAGAAACTGGGGACAAAACTGGCAATCTAATGCTGTTTTGGTTGGTCAAGCACTCTCTTTCCGTGTCACAGGCAGTGACCGTAGAACATCTACTTCCTGGAACATGGTTCCTTCTAACTGGCAGTTTGGTCAAACCTTTGTCGGGAAGAATTTCAGGGTTTAAGGCGAGTTTCGAGAAACTAAAATTTGGAGGAAATTCGAGAAATTAAAGTGGTTCGAGACAAAAGAAAACTCTCCGCTAATTTCGCTATTCCTCCTCCTTTTTTTTTACTAAATTTTATATATGGAAAGGAGAGAAAAATCAGGGGAAAGTATCTTTGACTTTTGTGTGTGTTTTCACTTTTTTAATGTTTTTTTTTTTGGGTTTGGTGTTTTAATTGTGAGTGATAAAGGGGGAAATGAGGGAGAAAGAGAAAGTGAGTAGCTGAAGTGGCTGTGAGAACATTTTGTAACAGCCCGCAGCTATTAAAGTATTTTACATGGTTTGGTTGTAAGTTACAACTTGTAACGTTTAATCTCGTGTAATCTTAAAACATGGTTGTATTATTGATACTTAATACTACTAATCTTCTTGTTT
CDS Sequence
- >AT2G39700.1
ATGGCTATTAAACTAGCAATTCTATTTACCACATTTGTTCTTTTTAGCCTCGCCGACGCTAGAATCCCCGGTATTTACTCCGGCGGCGCATGGCAAAACGCACACGCCACTTTTTACGGTGGCAGCGACGCCTCCGGCACAATGGGAGGAGCTTGTGGTTACGGTAACCTATACAGCCAAGGGTACGGGACCAACACGGCTGCTTTGAGTACGGCGCTGTTTAACAATGGTATGAGTTGTGGAGCCTGCTTTGAGCTAAAATGCGCCAACGACCCTCAATGGTGTCACTCAGGTAGTCCTTCGATCCTCATCACCGCAACCAATTTCTGCCCACCAAACTTGGCTCAGCCTAGCGACAACGGAGGATGGTGCAACCCACCACGTGAACACTTTGACCTAGCCATGCCTGTCTTCCTTAAGATCGCTCAATATCGCGCCGGCATTGTCCCCGTCTCATACCGCAGGGTGCCATGTAGAAAGAGAGGAGGCATAAGGTTCACAATCAACGGTCACCGTTACTTCAACTTGGTTCTGATCACTAACGTGGCTGGAGCAGGAGACATCGTGAGGGCTAGTGTGAAAGGATCACGGACTGGTTGGATGAGTTTGAGCAGAAACTGGGGACAAAACTGGCAATCTAATGCTGTTTTGGTTGGTCAAGCACTCTCTTTCCGTGTCACAGGCAGTGACCGTAGAACATCTACTTCCTGGAACATGGTTCCTTCTAACTGGCAGTTTGGTCAAACCTTTGTCGGGAAGAATTTCAGGGTTTAA
Protein Sequence
- >AT2G39700.1
MAIKLAILFTTFVLFSLADARIPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVGKNFRV