Gene Details:
- Gene ID: AT2G39530
- Gene Symbol: CASPL4D1
- Gene Name: CASP-like protein 4D1
- Description: Uncharacterized protein family (UPF0497);(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
Function-related keywords:
Literature:
- Transcriptome analysis of Arabidopsis colonized by a plant-growth promoting rhizobacterium reveals a general effect on disease resistance. DOI: 10.1046/j.1365-313x.2003.01867.x ; PMID: 14535883
- Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. DOI: 10.1006/jmbi.2000.4315 ; PMID: 11152613
- Suppression by ABA of salicylic acid and lignin accumulation and the expression of multiple genes, in Arabidopsis infected with Pseudomonas syringae pv. tomato. DOI: 10.1007/s10142-006-0041-4 ; PMID: 17149585
- Genome-wide identification of osmotic stress response gene in Arabidopsis thaliana. DOI: 10.1016/j.ygeno.2008.08.011 ; PMID: 18804526
- Transcriptional dynamics of two seed compartments with opposing roles in Arabidopsis seed germination. DOI: 10.1104/pp.113.223511 ; PMID: 23858430
- Functional and Evolutionary Analysis of the CASPARIAN STRIP MEMBRANE DOMAIN PROTEIN Family. DOI: 10.1104/pp.114.239137 ; PMID: 24920445
Sequences:
cDNA Sequence
- >AT2G39530.1
GAGTCAACGTAAATTTTGGCTATAAATTAGTCAACATTCCATGTCTTGCATTCGAACATCTTAGCCTTAATCATTTTCATCTTACTCTTTAAAGCGTAACGATTAATTAACGGGAAGATTTATATGGCTCCACCACCTCCGGCACCACCGTCCGTTACGTTGAGGACAGTGCTCCTTCTCCTTAGGGTTTTGACCGCGGCTTTCCTCCTCATAACGGTGGTCCTCATCAGCACCAACACCGTCACTCTCGAAATTTCAAGCACGTCTATCAAATTGCCTTTCAACGATGTCTATGCTTATAGATACATGCTGTCCGCTGCCGTCATCGGACTAGTTTACGCCGTTGTACAACTGTTCTTAACAATCTCCCAATTTGCCACCGGAAAAACACATCCTCTTACTTATCAGTTCGATTTCTACGGTGATAAGGTAATATCATATTTACTTGCAACGGGTTCGGCGGCAGGATTTGGAGTGAGCAAAGATTTGAAAGACACATACATAGCATTAATAGAATTTGATTCGACTGATCCAGTGGATAAGTTCTTTAGTAAAGGATATGCATCGGCCAGTCTTCTTCTCTTCGCATTCGTCTCTCTTGCCGTTTTATCCGTTTTCTCATCCCTTGCTCTTTCCAAACGACCAGTTCCAGTCTCATAAACACACATATGATCATTGTAACCCTACATTATGCTTCCTTCATTTTAATTCACCAATCGTGGAATTTAATAAGATTATACGCTTTTTAAGATTCTTTGGGTCACGTTACCAAATACATATATTACTTTGTTGGCTACATATCTCGCAAGGCTATGTTTGGGAGTACTATTTCTGTGAAAACATATGTAACCAACCTATCTATAAGGTCAAGTCTTCTTATTTCTAATCATCATGCAAAATTATTATTGTGTCGGATCATTAAAAAATGTTATTAAAAAGCCCTAACTTTTCATAA
CDS Sequence
- >AT2G39530.1
ATGGCTCCACCACCTCCGGCACCACCGTCCGTTACGTTGAGGACAGTGCTCCTTCTCCTTAGGGTTTTGACCGCGGCTTTCCTCCTCATAACGGTGGTCCTCATCAGCACCAACACCGTCACTCTCGAAATTTCAAGCACGTCTATCAAATTGCCTTTCAACGATGTCTATGCTTATAGATACATGCTGTCCGCTGCCGTCATCGGACTAGTTTACGCCGTTGTACAACTGTTCTTAACAATCTCCCAATTTGCCACCGGAAAAACACATCCTCTTACTTATCAGTTCGATTTCTACGGTGATAAGGTAATATCATATTTACTTGCAACGGGTTCGGCGGCAGGATTTGGAGTGAGCAAAGATTTGAAAGACACATACATAGCATTAATAGAATTTGATTCGACTGATCCAGTGGATAAGTTCTTTAGTAAAGGATATGCATCGGCCAGTCTTCTTCTCTTCGCATTCGTCTCTCTTGCCGTTTTATCCGTTTTCTCATCCCTTGCTCTTTCCAAACGACCAGTTCCAGTCTCATAA
Protein Sequence
- >AT2G39530.1
MAPPPPAPPSVTLRTVLLLLRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRPVPVS