Gene Details:
- Gene ID: AT2G39470
- Gene Symbol: PnsL1, PPL2
- Gene Name: Photosynthetic NDH subcomplex L 1, PsbP-like protein 2
- Description: PsbP-like protein 2;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Germplasm Phenotype:
- RPL23aA/rpl23aa; RPL23aB/rpl23ab — F1 progeny have pointed leaves. Non- allelic non complementation.
- rpl23aa — Pleiotropic defects:pointed leaves, retarded root growth, and reduced plant size.Icompletely penetrant tricotyledon phenotype.
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure
Literature:
- Proteome map of the chloroplast lumen of Arabidopsis thaliana. DOI: 10.1074/jbc.M108575200 ; PMID: 11719511
- Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. DOI: 10.1105/tpc.010304 ; PMID: 11826309
- The FHY3 and FAR1 genes encode transposase-related proteins involved in regulation of gene expression by the phytochrome A-signaling pathway. DOI: 10.1046/j.1365-313x.2003.01741.x ; PMID: 12753585
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. DOI: 10.1105/tpc.017814 ; PMID: 14729914
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- Oviposition by pierid butterflies triggers defense responses in Arabidopsis. DOI: 10.1104/pp.106.090837 ; PMID: 17142483
- Distinct functions for the two PsbP-like proteins PPL1 and PPL2 in the chloroplast thylakoid lumen of Arabidopsis. DOI: 10.1104/pp.107.105866 ; PMID: 17827269
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Structure of the chloroplast NADH dehydrogenase-like complex: nomenclature for nuclear-encoded subunits. DOI: 10.1093/pcp/pcr098 ; PMID: 21785130
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Identification and Roles of Photosystem II Assembly, Stability, and Repair Factors in Arabidopsis. DOI: 10.3389/fpls.2016.00168 ; PMID: 26909098
- Diuron treatment reveals the different roles of two cyclic electron transfer pathways in photosystem II in Arabidopsis thaliana. DOI: 10.1016/j.pestbp.2016.09.002 ; PMID: 28364799
- Arabidopsis paralogous genes RPL23aA and RPL23aB encode functionally equivalent proteins. DOI: 10.1186/s12870-020-02672-1 ; PMID: 33032526
- Proteome map of the chloroplast lumen of Arabidopsis thaliana. DOI: 10.1074/jbc.M108575200 ; PMID: 11719511
- Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction. DOI: 10.1105/tpc.010304 ; PMID: 11826309
- In-depth analysis of the thylakoid membrane proteome of Arabidopsis thaliana chloroplasts: new proteins, new functions, and a plastid proteome database. DOI: 10.1105/tpc.017814 ; PMID: 14729914
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- New functions of the thylakoid membrane proteome of Arabidopsis thaliana revealed by a simple, fast, and versatile fractionation strategy. DOI: 10.1074/jbc.M406763200 ; PMID: 15322131
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Sequences:
cDNA Sequence
- >AT2G39470.2
ATCCACATGTTGATGAATGGAGAAGTCCGAGAAATGACGAAAATCAGAAATTTCTTATCCACATAGAACACTAAGGCAATGTTCATTGATCATCAAAAGTCTTGTGAATTGTAGCCACTATGGCAGTCTCCTCACTCTCAATCCGCTGTGGTGGTTTCTCACCAACAATCTCCCACAAGACAGAAATTCTCTGTCCAAATCCATCACTCAAAGCTTGTTGTTTACTTTCATCCGGTGCTTACCAAAAAGGCAGCGGAAACAATTGGAAGAGAAGGCAAGCTCTTGTGGGAGTAGGAACTTTAGTGGCAACTTCAATTCCAGCAACTTTGCTTCTTGCTGAAGAGATACCAAAAAGCTACTCGCCTTTTGTGGATCGAGAAGACGGGTATTCTTACTATTACCCATCAGACTGGAGGGAATTTGACTTCAGGGCACATGATTCAGCCTTCAAAGATAGATACTTGCAACTGCAGAATGTGCGGGTCAGGTTCATACCAACGGAGAAAAACGACATCCATGAAGTAGGTCCTATGGAAGAGGTGGTTTATGATCTAGTGAAGCATAAGTTTGCAGCACCAAACCAAGTAGCTACCATCTACGATATGAAAGAGAGGGTGGAAGATGGAAAGAACTATTACACGTTTGAGTATGGACTAAGAACTCCTATCTATGCAACCACTTCCTTTGCAACAGTGGCAGTTGGAAACAACAGATACTACACTCTCATAGTTGGAGCAAATGAGAGAAGGTGGAGGAAAGTGAAAAAGCAGCTTCAAGTTGTGGCCGACTCTTTGAAGATCCTTCAGATTTGACAAACACAAGAAACATCTTACTCCTATATATCTTTCTCTCTCTGTGGTTACAAAACTGTCTGTAGATAACAATTTGATATTTTCATATTCTCTATAACTCCAACGATGGTTTTGGCATTGTGAGTTAGATTCTGAGTTGGTTCAGTAATTCAATCAAACTTGCAAATAAAGTGGAAATAATGTATTTACA - >AT2G39470.1
ATCCACATGTTGATGAATGGAGAAGTCCGAGAAATGACGAAAATCAGAAATTTCTTATCCACATAGAACACTAAGGCAATGTTCATTGATCATCAAAAGTCTTGTGAATTGTAGCCACTATGGCAGTCTCCTCACTCTCAATCCGCTGTGGTGGTTTCTCACCAACAATCTCCCACAAGACAGAAATTCTCTGTCCAAATCCATCACTCAAAGCTTGTTGTTTACTTTCATCCGGTGCTTACCAAAAAGGCAGCGGAAACAATTGGAAGAGAAGGCAAGCTCTTGTGGGAGTAGGAACTTTAGTGGCAACTTCAATTCCAGCAACTTTGCTTCTTGCTGAAGAGATACCAAAAAGCTACTCGCCTTTTGTGGATCGAGAAGACGGGTATTCTTACTATTACCCATCAGACTGGAGGGAATTTGACTTCAGGGCACATGATTCAGCCTTCAAAGATAGATACTTGCAACTGCAGAATGTGCGGGTCAGGTTCATACCAACGGAGAAAAACGACATCCATGAAGTAGGTCCTATGGAAGAGGTGGTTTATGATCTAGTGAAGCATAAGTTTGCAGCACCAAACCAAGTAGCTACCATCTACGATATGAAAGAGAGGGTGGAAGATGGAAAGAACTATTACACGTTTGAGTATGGACTAAGAACTCCTATCTATGCAACCACTTCCTTTGCAACAGTGGCAGTTGGAAACAACAGATACTACACTCTCATAGTTGGAGCAAATGAGAGAAGGTGGAGGAAAGTGAAAAAGCAGCTTCAAGTTGTGGCCGACTCTTTGAAGATCCTTCAGATTTGACAAACACAAGAAACATCTTACTCCTATATATCTTTCTCTCTCTGTGGTTACAAAACTGTCTGTAGATAACAATTTGATATTTTCATATTCTCTATAACTCCAACGATGGTTTTGGCATTGTGAGTTAGATTCTGAGTTGGTTCAGTAATTCAATCAAACTTGCAAATAAAGTGGAAATAATGTATTTACA - >AT2G39470.3
ATCCACATGTTGATGAATGGAGAAGTCCGAGAAATGACGAAAATCAGAAATTTCTTATCCACATAGAACACTAAGGCAATGTTCATTGATCATCAAAAGTCTTGTGAATTGTAGCCACTATGGCAGTCTCCTCACTCTCAATCCGCTGTGGTGGTTTCTCACCAACAATCTCCCACAAGACAGAAATTCTCTGTCCAAATCCATCACTCAAAGCTTGTTGTTTACTTTCATCCGGTGCTTACCAAAAAGGCAGCGGAAACAATTGGAAGAGAAGGCAAGCTCTTGTGGGAGTAGGAACTTTAGTGGCAACTTCAATTCCAGCAACTTTGCTTCTTGCTGAAGAGATACCAAAAAGCTACTCGCCTTTTGTGGATCGAGAAGACGGGTATTCTTACTATTACCCATCAGACTGGAGGGAATTTGACTTCAGGGCACATGATTCAGCCTTCAAAGATAGATACTTGCAACTGCAGAATGTGCGGGTCAGGTTCATACCAACGGAGAAAAACGACATCCATGAAGTAGGTCCTATGGAAGAGGTGGTTTATGATCTAGTGAAGCATAAGTTTGCAGCACCAAACCAAGTAGCTACCATCTACGATATGAAAGAGAGGGTGGAAGATGGAAAGAACTATTACACGTTTGAGTATGGACTAAGAACTCCTATCTATGCAACCACTTCCTTTGCAACAGTGGCAGTTGGAAACAACAGATACTACACTCTCATAGTTGGAGCAAATGAGAGAAGGTGGAGGAAAGTGAAAAAGCAGCTTCAAGTTGTGGCCGACTCTTTGAAGATCCTTCAGATTTGACAAACACAAGAAACATCTTACTCCTATATATCTTTCTCTCTCTGTGGTTACAAAACTGTCTGTAGATAACAATTTGATATTTTCATATTCTCTATAACTCCAACGATGGTTTTGGCATTGTGAGTTAGATTCTGAGTTGGTTCAGTAATTCAATCAAACTTGCAAATAAAGTGGAAATAATGTATTTACA
CDS Sequence
- >AT2G39470.2
ATGGCAGTCTCCTCACTCTCAATCCGCTGTGGTGGTTTCTCACCAACAATCTCCCACAAGACAGAAATTCTCTGTCCAAATCCATCACTCAAAGCTTGTTGTTTACTTTCATCCGGTGCTTACCAAAAAGGCAGCGGAAACAATTGGAAGAGAAGGCAAGCTCTTGTGGGAGTAGGAACTTTAGTGGCAACTTCAATTCCAGCAACTTTGCTTCTTGCTGAAGAGATACCAAAAAGCTACTCGCCTTTTGTGGATCGAGAAGACGGGTATTCTTACTATTACCCATCAGACTGGAGGGAATTTGACTTCAGGGCACATGATTCAGCCTTCAAAGATAGATACTTGCAACTGCAGAATGTGCGGGTCAGGTTCATACCAACGGAGAAAAACGACATCCATGAAGTAGGTCCTATGGAAGAGGTGGTTTATGATCTAGTGAAGCATAAGTTTGCAGCACCAAACCAAGTAGCTACCATCTACGATATGAAAGAGAGGGTGGAAGATGGAAAGAACTATTACACGTTTGAGTATGGACTAAGAACTCCTATCTATGCAACCACTTCCTTTGCAACAGTGGCAGTTGGAAACAACAGATACTACACTCTCATAGTTGGAGCAAATGAGAGAAGGTGGAGGAAAGTGAAAAAGCAGCTTCAAGTTGTGGCCGACTCTTTGAAGATCCTTCAGATTTGA - >AT2G39470.1
ATGGCAGTCTCCTCACTCTCAATCCGCTGTGGTGGTTTCTCACCAACAATCTCCCACAAGACAGAAATTCTCTGTCCAAATCCATCACTCAAAGCTTGTTGTTTACTTTCATCCGGTGCTTACCAAAAAGGCAGCGGAAACAATTGGAAGAGAAGGCAAGCTCTTGTGGGAGTAGGAACTTTAGTGGCAACTTCAATTCCAGCAACTTTGCTTCTTGCTGAAGAGATACCAAAAAGCTACTCGCCTTTTGTGGATCGAGAAGACGGGTATTCTTACTATTACCCATCAGACTGGAGGGAATTTGACTTCAGGGCACATGATTCAGCCTTCAAAGATAGATACTTGCAACTGCAGAATGTGCGGGTCAGGTTCATACCAACGGAGAAAAACGACATCCATGAAGTAGGTCCTATGGAAGAGGTGGTTTATGATCTAGTGAAGCATAAGTTTGCAGCACCAAACCAAGTAGCTACCATCTACGATATGAAAGAGAGGGTGGAAGATGGAAAGAACTATTACACGTTTGAGTATGGACTAAGAACTCCTATCTATGCAACCACTTCCTTTGCAACAGTGGCAGTTGGAAACAACAGATACTACACTCTCATAGTTGGAGCAAATGAGAGAAGGTGGAGGAAAGTGAAAAAGCAGCTTCAAGTTGTGGCCGACTCTTTGAAGATCCTTCAGATTTGA - >AT2G39470.3
ATGGCAGTCTCCTCACTCTCAATCCGCTGTGGTGGTTTCTCACCAACAATCTCCCACAAGACAGAAATTCTCTGTCCAAATCCATCACTCAAAGCTTGTTGTTTACTTTCATCCGGTGCTTACCAAAAAGGCAGCGGAAACAATTGGAAGAGAAGGCAAGCTCTTGTGGGAGTAGGAACTTTAGTGGCAACTTCAATTCCAGCAACTTTGCTTCTTGCTGAAGAGATACCAAAAAGCTACTCGCCTTTTGTGGATCGAGAAGACGGGTATTCTTACTATTACCCATCAGACTGGAGGGAATTTGACTTCAGGGCACATGATTCAGCCTTCAAAGATAGATACTTGCAACTGCAGAATGTGCGGGTCAGGTTCATACCAACGGAGAAAAACGACATCCATGAAGTAGGTCCTATGGAAGAGGTGGTTTATGATCTAGTGAAGCATAAGTTTGCAGCACCAAACCAAGTAGCTACCATCTACGATATGAAAGAGAGGGTGGAAGATGGAAAGAACTATTACACGTTTGAGTATGGACTAAGAACTCCTATCTATGCAACCACTTCCTTTGCAACAGTGGCAGTTGGAAACAACAGATACTACACTCTCATAGTTGGAGCAAATGAGAGAAGGTGGAGGAAAGTGAAAAAGCAGCTTCAAGTTGTGGCCGACTCTTTGAAGATCCTTCAGATTTGA
Protein Sequence
- >AT2G39470.2
MAVSSLSIRCGGFSPTISHKTEILCPNPSLKACCLLSSGAYQKGSGNNWKRRQALVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI - >AT2G39470.1
MAVSSLSIRCGGFSPTISHKTEILCPNPSLKACCLLSSGAYQKGSGNNWKRRQALVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI - >AT2G39470.3
MAVSSLSIRCGGFSPTISHKTEILCPNPSLKACCLLSSGAYQKGSGNNWKRRQALVGVGTLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI