Information report for AT2G39350
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Functional Keywords
Literature and News
- The Arabidopsis thaliana ABC protein superfamily, a complete inventory. DOI: 10.1074/jbc.M103104200 ; PMID: 11346655
- Inventory and comparative analysis of rice and Arabidopsis ATP-binding cassette (ABC) systems. DOI: 10.1016/j.jmb.2004.07.093 ; PMID: 15381434
- Cuticular lipid composition, surface structure, and gene expression in Arabidopsis stem epidermis. DOI: 10.1104/pp.105.070805 ; PMID: 16299169
- Nematode-induced changes of transporter gene expression in Arabidopsis roots. DOI: 10.1094/MPMI-18-1247 ; PMID: 16478044
- Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling. DOI: 10.1111/j.1365-313X.2006.02756.x ; PMID: 16805732
- Genome-wide analysis of ATP-binding cassette (ABC) proteins in a model legume plant, Lotus japonicus: comparison with Arabidopsis ABC protein family. DOI: 10.1093/dnares/dsl013 ; PMID: 17164256
- Altered profile of secondary metabolites in the root exudates of Arabidopsis ATP-binding cassette transporter mutants. DOI: 10.1104/pp.107.109587 ; PMID: 18065561
- Plant ABC proteins–a unified nomenclature and updated inventory. DOI: 10.1016/j.tplants.2008.02.001 ; PMID: 18299247
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- ABCG transporters are required for suberin and pollen wall extracellular barriers in Arabidopsis. DOI: 10.1105/tpc.114.129049 ; PMID: 25217507
- Postmeiotic development of pollen surface layers requires two Arabidopsis ABCG-type transporters. DOI: 10.1007/s00299-016-2001-3 ; PMID: 27271688
- Cloning and expression of selected ABC transporters from the Arabidopsis thaliana ABCG family in Pichia pastoris. DOI: 10.1371/journal.pone.0211156 ; PMID: 30657786
- ABCG1 contributes to suberin formation in Arabidopsis thaliana roots. DOI: 10.1038/s41598-019-47916-9 ; PMID: 31388073
- ATP binding cassette transporters ABCG1 and ABCG16 affect reproductive development via auxin signalling in Arabidopsis. DOI: 10.1111/tpj.14690 ; PMID: 31944421
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
Gene Resources
- UniProt: A0A5S9X5D2
- EMBL: CACRSJ010000105, CACSHJ010000088
- AlphaFoldDB: A0A5S9X5D2
- EnsemblPlants: AT2G39350.1
- Gramene: AT2G39350.1
- KEGG: ath:AT2G39350
- Orthologous matrix: KWNCLFI
- ExpressionAtlas: AT2G39350
- InterPro: IPR003439, IPR003593, IPR013525
- PANTHER: PTHR48041, PTHR48041:SF12
- SUPFAM: SSF52540
- PROSITE: PS00211, PS50893
- Gene3D: 3.40.50.300
- OrthoDB: A0A5S9X5D2
- SWISS-MODEL: A0A5S9X5D2
Homologs
- Beta vulgaris BVRB_6g132820
- Cicer arietinum Ca_09685
- Citrullus lanatus Cla97C07G137030, Cla97C02G026670
- Cucumis melo MELO3C032789.2
- Cucumis sativus Csa_4G082340
- Juglans regia Jr14_18620
- Lupinus albus Lalb_Chr05g0217901
- Malus domestica MDP0000265619
- Oryza sativa Rcn1;OsABCG5, OsABCG3
Sequences
cDNA Sequence
- >AT2G39350.1
TCCCCAAATAAATAAACAATAAATCAAAACCGCATTTACATCCAAACAGTCAAAATATCAACCTAACATACTTTTCCCATGCAACTCACCCAGACTTTCTTATTTAACATAGCCTTCGTGTCTTCACACATCCAAACACGTCTCTTCATGCACTCTCTCGCTTCTATATAAGTTTTCAGTAACATAACAGATTTATACATATCCAACAAAAGTCCCATAAACTAAACAATAAACACTGCTGTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTAGAACAGTACGTTATGAGAGTGTTTTAAGGCCGTTAATTTGTTAAATCACTCTTTAAAAGTTTTTCTATTGTATCTATGGCTCGTATTGTAGCAGCTAATGATGATGATTCCATGGAGCTAAACACCATCTCCTCTATACACGATTCAACTTTAGGGCAACTTCTGAAGAACGTTAGTGACGTCAGAAAAATGGCTATTGGAGACGAGACTCCAGTTCACGAGTCCTTAAACCAAGACTACAACGATGGTTACATGCGTACAGTTCCATTCGTTCTCTCATTCGACAATCTCACATACAACGTCTCTGTTCGTCCAAAACTAGACTTCCGCAATCTCTTTCCACGTAGGAGAACAGAGGATCCGGAGATAGCTCAAACGGCGAGGCCAAAAACTAAAACCCTTCTCAATAATATCTCTGGCGAGACACGAGATGGAGAAATCATGGCTGTTCTAGGCGCTAGCGGCTCGGGAAAATCAACACTGATCGATGCATTAGCGAATCGGATTGCCAAAGGAAGCTTAAAAGGAACAGTGAAGCTAAACGGAGAAACACTTCAATCTCGAATGCTCAAAGTTATATCAGCTTACGTGATGCAAGATGACCTTCTCTTCCCAATGCTTACCGTTGAAGAAACACTAATGTTCGCAGCTGAGTTTCGTCTCCCGAGAAGTTTACCTAAATCTAAAAAGAAGCTTCGTGTGCAAGCTTTGATTGATCAACTAGGTATCAGAAACGCGGCTAAAACTATTATAGGAGACGAAGGTCACCGTGGAATCTCCGGTGGTGAAAGAAGACGTGTTTCCATCGGAATTGATATAATTCACGATCCGATTCTTCTCTTCCTCGATGAACCAACCTCTGGTTTGGATTCAACGAGTGCTTTCATGGTGGTTAAAGTATTGAAGAGGATTGCTCAGAGTGGTAGTATCGTAATTATGTCGATTCATCAACCTAGTCATCGTGTTCTCGGTTTGCTTGACCGGTTAATCTTCTTGTCACGTGGCCACACCGTGTATAGTGGATCTCCGGCGAGTCTTCCACGTTTTTTCACCGAATTCGGGAGTCCGATACCGGAGAACGAGAATCGAACGGAGTTTGCGTTAGATCTCATCCGTGAGCTTGAAGGATCCGCCGGAGGAACGAGAGGATTAATCGAATTCAACAAAAAATGGCAAGAGATGAAGAAACAGAGCAATCGTCAACCACCGTTGACTCCACCGTCATCACCGTACCCAAATCTAACACTAAAAGAAGCAATCGCCGCAAGTATCAGCAGAGGAAAGCTAGTTTCCGGCGGTGAATCCGTCGCTCACGGCGGAGCAACCACCAACACCACAACCCTAGCCGTTCCTGCATTCGCGAATCCAATGTGGATCGAAATCAAAACTCTCTCGAAACGATCAATGCTCAATTCACGAAGACAACCAGAGCTATTCGGAATCAGAATCGCCTCTGTTGTTATCACCGGATTCATTCTCGCCACCGTGTTCTGGCGATTAGATAATTCGCCTAAAGGAGTTCAAGAGCGGTTAGGGTTCTTCGCCTTCGCGATGTCGACAATGTTCTACACTTGCGCCGATGCGTTACCAGTTTTTCTCCAGGAACGTTATATCTTCATGAGAGAAACTGCTTACAACGCTTACCGGAGATCCTCATACGTTCTCTCTCACGCCATCGTCTCATTCCCGTCGCTCATCTTCCTCTCTGTAGCTTTCGCGGCGACGACGTATTGGGCAGTGGGCTTAGATGGAGGCCTAACGGGCCTTTTGTTCTACTGTCTGATCATTTTAGCCTCGTTCTGGTCAGGAAGCTCCTTTGTCACGTTTCTATCAGGTGTGGTTCCTAGTGTGATGTTGGGTTACACAATCGTCGTTGCTATTTTGGCTTACTTCTTGTTGTTCAGTGGATTCTTCATCAACAGAAACCGAATCCCGGATTACTGGATTTGGTTTCATTACATGTCATTGGTGAAGTACCCGTATGAAGCGGTTTTACAGAACGAGTTCTCTGATGCGACCAAGTGTTTTGTGAGAGGAGTTCAGATTTTCGACAACACGCCATTAGGGGAACTACCGGAAGTGATGAAGCTGAAGCTTCTTGGTACAGTGAGCAAGTCCCTCGGGGTAACGATATCGAGCACGACTTGTTTAACTACTGGTTCAGATATTCTGAGGCAGCAAGGTGTGGTTCAGCTGAGTAAATGGAATTGCTTGTTCATCACAGTTGCTTTTGGGTTCTTTTTTAGGATTTTGTTCTACTTCACTTTGTTACTAGGAAGCAAGAACAAGCGGAGGTGAAAACAACTAGAAGACCCAAATCAAAACATACTTGTATTTTCTGTTTGTAATTCCTTGAATTGTTTAATGAAAATGGTTTCTTTTCATAT
CDS Sequence
- >AT2G39350.1
ATGGCTCGTATTGTAGCAGCTAATGATGATGATTCCATGGAGCTAAACACCATCTCCTCTATACACGATTCAACTTTAGGGCAACTTCTGAAGAACGTTAGTGACGTCAGAAAAATGGCTATTGGAGACGAGACTCCAGTTCACGAGTCCTTAAACCAAGACTACAACGATGGTTACATGCGTACAGTTCCATTCGTTCTCTCATTCGACAATCTCACATACAACGTCTCTGTTCGTCCAAAACTAGACTTCCGCAATCTCTTTCCACGTAGGAGAACAGAGGATCCGGAGATAGCTCAAACGGCGAGGCCAAAAACTAAAACCCTTCTCAATAATATCTCTGGCGAGACACGAGATGGAGAAATCATGGCTGTTCTAGGCGCTAGCGGCTCGGGAAAATCAACACTGATCGATGCATTAGCGAATCGGATTGCCAAAGGAAGCTTAAAAGGAACAGTGAAGCTAAACGGAGAAACACTTCAATCTCGAATGCTCAAAGTTATATCAGCTTACGTGATGCAAGATGACCTTCTCTTCCCAATGCTTACCGTTGAAGAAACACTAATGTTCGCAGCTGAGTTTCGTCTCCCGAGAAGTTTACCTAAATCTAAAAAGAAGCTTCGTGTGCAAGCTTTGATTGATCAACTAGGTATCAGAAACGCGGCTAAAACTATTATAGGAGACGAAGGTCACCGTGGAATCTCCGGTGGTGAAAGAAGACGTGTTTCCATCGGAATTGATATAATTCACGATCCGATTCTTCTCTTCCTCGATGAACCAACCTCTGGTTTGGATTCAACGAGTGCTTTCATGGTGGTTAAAGTATTGAAGAGGATTGCTCAGAGTGGTAGTATCGTAATTATGTCGATTCATCAACCTAGTCATCGTGTTCTCGGTTTGCTTGACCGGTTAATCTTCTTGTCACGTGGCCACACCGTGTATAGTGGATCTCCGGCGAGTCTTCCACGTTTTTTCACCGAATTCGGGAGTCCGATACCGGAGAACGAGAATCGAACGGAGTTTGCGTTAGATCTCATCCGTGAGCTTGAAGGATCCGCCGGAGGAACGAGAGGATTAATCGAATTCAACAAAAAATGGCAAGAGATGAAGAAACAGAGCAATCGTCAACCACCGTTGACTCCACCGTCATCACCGTACCCAAATCTAACACTAAAAGAAGCAATCGCCGCAAGTATCAGCAGAGGAAAGCTAGTTTCCGGCGGTGAATCCGTCGCTCACGGCGGAGCAACCACCAACACCACAACCCTAGCCGTTCCTGCATTCGCGAATCCAATGTGGATCGAAATCAAAACTCTCTCGAAACGATCAATGCTCAATTCACGAAGACAACCAGAGCTATTCGGAATCAGAATCGCCTCTGTTGTTATCACCGGATTCATTCTCGCCACCGTGTTCTGGCGATTAGATAATTCGCCTAAAGGAGTTCAAGAGCGGTTAGGGTTCTTCGCCTTCGCGATGTCGACAATGTTCTACACTTGCGCCGATGCGTTACCAGTTTTTCTCCAGGAACGTTATATCTTCATGAGAGAAACTGCTTACAACGCTTACCGGAGATCCTCATACGTTCTCTCTCACGCCATCGTCTCATTCCCGTCGCTCATCTTCCTCTCTGTAGCTTTCGCGGCGACGACGTATTGGGCAGTGGGCTTAGATGGAGGCCTAACGGGCCTTTTGTTCTACTGTCTGATCATTTTAGCCTCGTTCTGGTCAGGAAGCTCCTTTGTCACGTTTCTATCAGGTGTGGTTCCTAGTGTGATGTTGGGTTACACAATCGTCGTTGCTATTTTGGCTTACTTCTTGTTGTTCAGTGGATTCTTCATCAACAGAAACCGAATCCCGGATTACTGGATTTGGTTTCATTACATGTCATTGGTGAAGTACCCGTATGAAGCGGTTTTACAGAACGAGTTCTCTGATGCGACCAAGTGTTTTGTGAGAGGAGTTCAGATTTTCGACAACACGCCATTAGGGGAACTACCGGAAGTGATGAAGCTGAAGCTTCTTGGTACAGTGAGCAAGTCCCTCGGGGTAACGATATCGAGCACGACTTGTTTAACTACTGGTTCAGATATTCTGAGGCAGCAAGGTGTGGTTCAGCTGAGTAAATGGAATTGCTTGTTCATCACAGTTGCTTTTGGGTTCTTTTTTAGGATTTTGTTCTACTTCACTTTGTTACTAGGAAGCAAGAACAAGCGGAGGTGA
Protein Sequence
- >AT2G39350.1
MARIVAANDDDSMELNTISSIHDSTLGQLLKNVSDVRKMAIGDETPVHESLNQDYNDGYMRTVPFVLSFDNLTYNVSVRPKLDFRNLFPRRRTEDPEIAQTARPKTKTLLNNISGETRDGEIMAVLGASGSGKSTLIDALANRIAKGSLKGTVKLNGETLQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLKRIAQSGSIVIMSIHQPSHRVLGLLDRLIFLSRGHTVYSGSPASLPRFFTEFGSPIPENENRTEFALDLIRELEGSAGGTRGLIEFNKKWQEMKKQSNRQPPLTPPSSPYPNLTLKEAIAASISRGKLVSGGESVAHGGATTNTTTLAVPAFANPMWIEIKTLSKRSMLNSRRQPELFGIRIASVVITGFILATVFWRLDNSPKGVQERLGFFAFAMSTMFYTCADALPVFLQERYIFMRETAYNAYRRSSYVLSHAIVSFPSLIFLSVAFAATTYWAVGLDGGLTGLLFYCLIILASFWSGSSFVTFLSGVVPSVMLGYTIVVAILAYFLLFSGFFINRNRIPDYWIWFHYMSLVKYPYEAVLQNEFSDATKCFVRGVQIFDNTPLGELPEVMKLKLLGTVSKSLGVTISSTTCLTTGSDILRQQGVVQLSKWNCLFITVAFGFFFRILFYFTLLLGSKNKRR