Information report for AT2G39290
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- pgp — Pale green plants
- pgp1-2 — Impaired photosynthesis with decreased chlorophyll content. Susceptible to photo damage, abolished oxygen-evolving activity of PSII, blocked energy transfer from antenna to PSII reaction center, dysfunctional cyclic election flow around PSI, rearranged antenna to PSII and PSI.
Functional Keywords
Literature and News
- Phosphatidylglycerophosphate synthases from Arabidopsis thaliana. DOI: 10.1016/s0014-5793(01)03163-5 ; PMID: 11741606
- Modulation of P-glycoproteins by auxin transport inhibitors is mediated by interaction with immunophilins. DOI: 10.1074/jbc.M709655200 ; PMID: 18499676
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Phosphatidylglycerol biosynthesis is required for the development of embryos and normal membrane structures of chloroplasts and mitochondria in Arabidopsis. DOI: 10.1016/j.febslet.2014.03.010 ; PMID: 24632290
- Negative phototropism is seen in Arabidopsis inflorescences when auxin signaling is reduced to a minimal level by an Aux/IAA dominant mutation, axr2. DOI: 10.4161/15592324.2014.990838 ; PMID: 25738325
- Multiple Impacts of Loss of Plastidic Phosphatidylglycerol Biosynthesis on Photosynthesis during Seedling Growth of Arabidopsis. DOI: 10.3389/fpls.2016.00336 ; PMID: 27047516
- Integrated bioinformatics analysis of As, Au, Cd, Pb and Cu heavy metal responsive marker genes through Arabidopsis thaliana GEO datasets. DOI: 10.7717/peerj.6495 ; PMID: 30918749
- The decreased PG content of pgp1 inhibits PSI photochemistry and limits reaction center and light-harvesting polypeptide accumulation in response to cold acclimation. DOI: 10.1007/s00425-022-03819-0 ; PMID: 35015152
- The pgp1 mutant locus of Arabidopsis encodes a phosphatidylglycerolphosphate synthase with impaired activity. DOI: 10.1104/pp.002725 ; PMID: 12068104
- Arabidopsis phosphatidylglycerophosphate synthase 1 is essential for chloroplast differentiation, but is dispensable for mitochondrial function. DOI: 10.1046/j.1365-313x.2003.01680.x ; PMID: 12609031
- Proteomics of the chloroplast envelope membranes from Arabidopsis thaliana. DOI: 10.1074/mcp.M300030-MCP200 ; PMID: 12766230
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: A0A178VXZ6
- EMBL: CACRSJ010000105, CACSHJ010000088, LUHQ01000002
- AlphaFoldDB: A0A178VXZ6
- EnsemblPlants: AT2G39290.1
- Gramene: AT2G39290.1
- KEGG: ath:AT2G39290
- Orthologous matrix: ATRDWSH
- ExpressionAtlas: AT2G39290
- InterPro: IPR000462, IPR004570, IPR043130
- PANTHER: PTHR14269, PTHR14269:SF62
- PROSITE: PS00379
- Gene3D: 1.20.120.1760
- OrthoDB: A0A178VXZ6
- SWISS-MODEL: A0A178VXZ6
Sequences
cDNA Sequence
- >AT2G39290.1
GAATCCACCAAAGTCGCCACTGTCTTTCCCAATTTCTTTGAACTTTTCAGGTACCCTTAAACTTCATCTTCTTCGATTTTTACCATTTTTTTCAATTTGCAATCAGAAATCGAAGCGATCCAAATTAGTAAGCTCGCCCATGCTCAGATCCGGTCTGGCTTCGTTAATCGTCGATGTCAATTTGCGGCGCACGTTACGTCCATCCCCAACCTTTTCTTTTCCGGCGCATCTTAGCCGTTGCATTATCACTTCCCGTTACTCCTCCCGTACATCTCTAAGGTTTCCGATTCAAATATCTCGCCACCAACACCGTCTATCCTACTTTTCTTCATCCTCTTCGTCGGAGCAAAGCAGACCAACTTCCTCTTCCCGAAACAGTTTCAGTGGTCACGGTCAGCTTGATAGTGATGATAATTCTTCACCGCCTCCGTCGCAATCATCTTCCAAAGTTCTTACATTGCCTACCGTATTAACACTTGGTCGTGTCGCCGCCGTCCCGCTTCTCGTCGCAACCTTTTACGTTGATAGTTGGTGGGGAACAACTGCTACAACAAGCATTTTCATTGCAGCAGCCATTACAGACTGGCTTGACGGCTATCTTGCCCGCAAGATGAGGTTAGGTTCTGCGTTTGGTGCCTTTTTGGATCCAGTTGCTGATAAGCTTATGGTTGCAGCTACATTGATTTTACTGTGTACAAAACCTATCCAAGTTGCTGAATTAGGACCACTTCCATGGTTATTGACCGTACCTTCTATTGCAATCATTGGTAGGGAGATTACTATGTCCGCAGTAAGAGAATGGGCTGCATCTCAAAATGGAAAGCTTTTAGAGGCAGTTGCTGTAAATAACTTGGGCAAGTGGAAAACCGCCACGCAGATGACAGCACTAACCATACTTCTTGCAAGCCGAGATAGCAATGTTGGATGGCTCGTAGCTTCAGGTGCTGGCTTGCTTTATGTATCAGCAGGACTATCTGTTTGGTCTTTAGCCGTTTATATGAGGAAGATATGGAAAGTACTAATGAAGTAGTATTAGTAGTAGTAATTCATCTATTGGTTTTGTTTTGCTTTGACCTGCATTTGGATTTATGTATTGATGGAAAGGGTCTCAGTCATCGCCTGTACAAGAGCACAAAACTTGAATGCTGCAACATTTAAGTAGTTTGAGAATATGTAGATGATTTTGCTTTGCACTTTTCCAACACAATATAGAGTGTGCAACATAGTCTTGGTTGAGATTAAAGCCTTATAATGAGTGTATTGTATAAACGATGAATACGTATTTCCAACATATGGAACAAACATTCTTTATTCATACACCGCAGTTTCAAATTATCAAACAAAAA
CDS Sequence
- >AT2G39290.1
ATGCTCAGATCCGGTCTGGCTTCGTTAATCGTCGATGTCAATTTGCGGCGCACGTTACGTCCATCCCCAACCTTTTCTTTTCCGGCGCATCTTAGCCGTTGCATTATCACTTCCCGTTACTCCTCCCGTACATCTCTAAGGTTTCCGATTCAAATATCTCGCCACCAACACCGTCTATCCTACTTTTCTTCATCCTCTTCGTCGGAGCAAAGCAGACCAACTTCCTCTTCCCGAAACAGTTTCAGTGGTCACGGTCAGCTTGATAGTGATGATAATTCTTCACCGCCTCCGTCGCAATCATCTTCCAAAGTTCTTACATTGCCTACCGTATTAACACTTGGTCGTGTCGCCGCCGTCCCGCTTCTCGTCGCAACCTTTTACGTTGATAGTTGGTGGGGAACAACTGCTACAACAAGCATTTTCATTGCAGCAGCCATTACAGACTGGCTTGACGGCTATCTTGCCCGCAAGATGAGGTTAGGTTCTGCGTTTGGTGCCTTTTTGGATCCAGTTGCTGATAAGCTTATGGTTGCAGCTACATTGATTTTACTGTGTACAAAACCTATCCAAGTTGCTGAATTAGGACCACTTCCATGGTTATTGACCGTACCTTCTATTGCAATCATTGGTAGGGAGATTACTATGTCCGCAGTAAGAGAATGGGCTGCATCTCAAAATGGAAAGCTTTTAGAGGCAGTTGCTGTAAATAACTTGGGCAAGTGGAAAACCGCCACGCAGATGACAGCACTAACCATACTTCTTGCAAGCCGAGATAGCAATGTTGGATGGCTCGTAGCTTCAGGTGCTGGCTTGCTTTATGTATCAGCAGGACTATCTGTTTGGTCTTTAGCCGTTTATATGAGGAAGATATGGAAAGTACTAATGAAGTAG
Protein Sequence
- >AT2G39290.1
MLRSGLASLIVDVNLRRTLRPSPTFSFPAHLSRCIITSRYSSRTSLRFPIQISRHQHRLSYFSSSSSSEQSRPTSSSRNSFSGHGQLDSDDNSSPPPSQSSSKVLTLPTVLTLGRVAAVPLLVATFYVDSWWGTTATTSIFIAAAITDWLDGYLARKMRLGSAFGAFLDPVADKLMVAATLILLCTKPIQVAELGPLPWLLTVPSIAIIGREITMSAVREWAASQNGKLLEAVAVNNLGKWKTATQMTALTILLASRDSNVGWLVASGAGLLYVSAGLSVWSLAVYMRKIWKVLMK