Information report for AT2G39210
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- pic30-1 — Insensitive to picolinate as measured by root length when grown in presence of picolinate.
- pic30-2 — Insensitive to picolinate as measured by root length when grown in presence of picolinate.
- pic30-3 — Insensitive to picolinate as measured by root length when grown in presence of picolinate.
Functional Keywords
Literature and News
- Comparative genomics in salt tolerance between Arabidopsis and aRabidopsis-related halophyte salt cress using Arabidopsis microarray. DOI: 10.1104/pp.104.039909 ; PMID: 15247402
- DNA array analyses of Arabidopsis thaliana lacking a vacuolar Na+/H+ antiporter: impact of AtNHX1 on gene expression. DOI: 10.1111/j.1365-313X.2004.02253.x ; PMID: 15546358
- Detoxification and transcriptome response in Arabidopsis seedlings exposed to the allelochemical benzoxazolin-2(3H)-one. DOI: 10.1074/jbc.M500694200 ; PMID: 15824099
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- An Arabidopsis (malectin-like) leucine-rich repeat receptor-like kinase contributes to downy mildew disease. DOI: 10.1111/j.1365-3040.2011.02390.x ; PMID: 21711359
- Arabidopsis PIC30 encodes a major facilitator superfamily transporter responsible for the uptake of picolinate herbicides. DOI: 10.1111/tpj.14608 ; PMID: 31710151
Gene Resources
- UniProt: O80960
- EMBL: AC004697, AF419593, CP002685
- AlphaFoldDB: O80960
- EnsemblPlants: AT2G39210.1
- Gramene: AT2G39210.1
- KEGG: ath:AT2G39210
- Orthologous matrix: WGLICTG
- ExpressionAtlas: AT2G39210
- InterPro: IPR010658, IPR036259, IPR056555
- PANTHER: PTHR21576, PTHR21576:SF84
- SUPFAM: SSF103473
- Gene3D: 1.20.1250.20
- Conserved Domain Database: cd17354
Homologs
- Brassica napus GSBRNA2T00090887001
- Daucus carota DCAR_007495
- Malus domestica MD04G1112900
- Pyrus bretschneideri Pbr029332.1
Sequences
cDNA Sequence
- >AT2G39210.1
TAATAGTCAAAATCTTTTCAAATTTTTCTACTTCTTGTTTCTATGAAAAATAGGAAAAATTGAAAATCATCCATTCTTGGGTTGAATTTCTTGACATTTTTCTTTTAATATATGGACAAATCAATATAATATTTTGGTACTATTATATAATATAGGATGAAGGATAGCTTCCAATGCCAACCTTCCTCTCCTTATCACTCTCCAAGTCAATGTCAACGGTCTTCGCCCTCTAACTCCTCTCTCTTCTCTCACACACACTTCGTGGCTAATATATTCCACCAAGAACACAACCAAAGAGCATCCCTCTCGACACACACACTTCTCTCCTAAAACCCAAAAATGGTGGCTGCAAGTCCCGGTGGCTCAATGAAGAGCTTAACCATCCAAATCCTAACCGGAAGATGGTTCATGTTCTTTGGAAGTCTCTTAATCATGTCGACAGCTGGAGCCACTTACATGTTCGGTATCTACTCAGGCGATATCAAGGAAACCTTAGGCTACGACCAAACCACTCTTAATCTCCTAAGTTTCTTCAAAGATCTCGGAGCCAACGTTGGAGTCCTCGCGGGTCTACTCAATGAGGTAACTCCTCCTTGGTTCATCCTCTTGATCGGAGCCATCCTTAACTTCTTTGGATACTTCATGATTTGGCTCGCCGTCACGGAACGGATCTCGAAACCTCAAGTTTGGCACATGTGTCTCTATATCTGCGTTGGAGCCAACTCGCAGTCGTTCGCTAATACCGGATCTCTCGTCACGTGCGTTAAGAACTTCCCGGAGTCACGTGGGGTTGTCTTGGGGATTCTCAAAGGCTACGTTGGTCTTAGTGGCGCCATTATTACACAGCTCTACCGTGCCTTTTATGGTGAAGACACAAAAGAGCTCATCTTGATGATTGGTTGGTTGCCGGCTATAGTCTCGTTTGCGTTTTTGAGAACGATAAGAATAATGAAAGTGAAAAGACAGACAAACGAACTAAAGGTGTTCTATAACTTCCTCTACATATCGCTCGGGCTTGCGACGTTTCTCATGGTGGTCATCATCATCAACAAACTCTCGGGCTTTACACAAAGCGAGTTTGGAGGTAGCGCCGCGGTAGTGATCGTCTTACTTCTTTTGCCCATTATAGTCGTCATCTTGGAAGAGAAGAAGCTTTGGAAGGAGAAACAAGTCGCCTTAAACGATCCAGCACCCATCAATGTCGTAACTGAGAAACCCAAGTTAGATTCATCAGAGTTCAAAGATGATGATGGTGAAGAGTCAAAGGAGGTAGTGGAGAAGGTGAAAACACCGTCGTGTTGGACGACTGTGTTTAATCCACCGGAGAGAGGAGATGACTATACAATCTTGCAAGCGTTGTTTAGCGTAGACATGTTGATTTTGTTCTTAGCAACGATATGTGGCGTAGGAGGGACTTTGACGGCGATAGACAATTTGGGTCAAATCGGAAACTCGTTGGGTTACCCGAAGAGAAGCGTAAGCACGTTTGTGTCACTCGTAAGCATATGGAATTACTATGGTCGTGTGGTTTCAGGTGTGGTCTCTGAGATCTTCTTGATCAAATACAAATTTCCAAGGCCTTTAATGCTCACGATGGTCCTCCTCTTGTCCTGCGCGGGTCACCTCCTCATCGCCTTTAATGTCCCCGGTGGACTTTATGTCGCATCGGTCATCATAGGGTTTTGTTTTGGTGCGCAATGGCCTCTTCTATTTGCTATAATATCTGAGATTTTCGGGCTTAAGTACTACTCGACATTGTATAACTTCGGGTCAGTCGCGAGCCCGATCGGGTCTTACTTGCTAAACGTTCGGGTCGCAGGGTATTTGTACGACGTGGAGGCGGGTAAGCAATATAAGGCATTAGGGAAAACGAGAGTAGAAGGGCAAGATTTGAATTGCATAGGCACGTCTTGTTTTAAGTTGTCTTTTATAATAATTGCCGCTGTAACTTTGTTCGGTGTATTGGTCTCGATGGTTTTGGTGATCCGGACCAAGAAGTTTTACAAGAGTGATATCTACAAAAAGTTTAGAGAAAAAGCGTTAGCTGCCGAGATGGAGATGGCAGCGCCGGCTGCAGCCAGATCTACCGTGGCTAAGGAAGACAAGGATGATGTTAAAGGCAAAGTAATAGGAAAAGGAGGGTAAACTATTTAGTAGATGATTGTTACAGATACTAGATAACAAAAGATGGTCAAGTATTTTGTAAACACTTTTATATATCTCCTTAATGTGAAACCTATCTTTTATTAATAGCATTTTGTTTTGTTTTTGAAGCAATACTTTATATTTGATGCTTTTATCGTTTTGCGTTTTAGGAGTTTGGATATTAG
CDS Sequence
- >AT2G39210.1
ATGGTGGCTGCAAGTCCCGGTGGCTCAATGAAGAGCTTAACCATCCAAATCCTAACCGGAAGATGGTTCATGTTCTTTGGAAGTCTCTTAATCATGTCGACAGCTGGAGCCACTTACATGTTCGGTATCTACTCAGGCGATATCAAGGAAACCTTAGGCTACGACCAAACCACTCTTAATCTCCTAAGTTTCTTCAAAGATCTCGGAGCCAACGTTGGAGTCCTCGCGGGTCTACTCAATGAGGTAACTCCTCCTTGGTTCATCCTCTTGATCGGAGCCATCCTTAACTTCTTTGGATACTTCATGATTTGGCTCGCCGTCACGGAACGGATCTCGAAACCTCAAGTTTGGCACATGTGTCTCTATATCTGCGTTGGAGCCAACTCGCAGTCGTTCGCTAATACCGGATCTCTCGTCACGTGCGTTAAGAACTTCCCGGAGTCACGTGGGGTTGTCTTGGGGATTCTCAAAGGCTACGTTGGTCTTAGTGGCGCCATTATTACACAGCTCTACCGTGCCTTTTATGGTGAAGACACAAAAGAGCTCATCTTGATGATTGGTTGGTTGCCGGCTATAGTCTCGTTTGCGTTTTTGAGAACGATAAGAATAATGAAAGTGAAAAGACAGACAAACGAACTAAAGGTGTTCTATAACTTCCTCTACATATCGCTCGGGCTTGCGACGTTTCTCATGGTGGTCATCATCATCAACAAACTCTCGGGCTTTACACAAAGCGAGTTTGGAGGTAGCGCCGCGGTAGTGATCGTCTTACTTCTTTTGCCCATTATAGTCGTCATCTTGGAAGAGAAGAAGCTTTGGAAGGAGAAACAAGTCGCCTTAAACGATCCAGCACCCATCAATGTCGTAACTGAGAAACCCAAGTTAGATTCATCAGAGTTCAAAGATGATGATGGTGAAGAGTCAAAGGAGGTAGTGGAGAAGGTGAAAACACCGTCGTGTTGGACGACTGTGTTTAATCCACCGGAGAGAGGAGATGACTATACAATCTTGCAAGCGTTGTTTAGCGTAGACATGTTGATTTTGTTCTTAGCAACGATATGTGGCGTAGGAGGGACTTTGACGGCGATAGACAATTTGGGTCAAATCGGAAACTCGTTGGGTTACCCGAAGAGAAGCGTAAGCACGTTTGTGTCACTCGTAAGCATATGGAATTACTATGGTCGTGTGGTTTCAGGTGTGGTCTCTGAGATCTTCTTGATCAAATACAAATTTCCAAGGCCTTTAATGCTCACGATGGTCCTCCTCTTGTCCTGCGCGGGTCACCTCCTCATCGCCTTTAATGTCCCCGGTGGACTTTATGTCGCATCGGTCATCATAGGGTTTTGTTTTGGTGCGCAATGGCCTCTTCTATTTGCTATAATATCTGAGATTTTCGGGCTTAAGTACTACTCGACATTGTATAACTTCGGGTCAGTCGCGAGCCCGATCGGGTCTTACTTGCTAAACGTTCGGGTCGCAGGGTATTTGTACGACGTGGAGGCGGGTAAGCAATATAAGGCATTAGGGAAAACGAGAGTAGAAGGGCAAGATTTGAATTGCATAGGCACGTCTTGTTTTAAGTTGTCTTTTATAATAATTGCCGCTGTAACTTTGTTCGGTGTATTGGTCTCGATGGTTTTGGTGATCCGGACCAAGAAGTTTTACAAGAGTGATATCTACAAAAAGTTTAGAGAAAAAGCGTTAGCTGCCGAGATGGAGATGGCAGCGCCGGCTGCAGCCAGATCTACCGTGGCTAAGGAAGACAAGGATGATGTTAAAGGCAAAGTAATAGGAAAAGGAGGGTAA
Protein Sequence
- >AT2G39210.1
MVAASPGGSMKSLTIQILTGRWFMFFGSLLIMSTAGATYMFGIYSGDIKETLGYDQTTLNLLSFFKDLGANVGVLAGLLNEVTPPWFILLIGAILNFFGYFMIWLAVTERISKPQVWHMCLYICVGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYRAFYGEDTKELILMIGWLPAIVSFAFLRTIRIMKVKRQTNELKVFYNFLYISLGLATFLMVVIIINKLSGFTQSEFGGSAAVVIVLLLLPIIVVILEEKKLWKEKQVALNDPAPINVVTEKPKLDSSEFKDDDGEESKEVVEKVKTPSCWTTVFNPPERGDDYTILQALFSVDMLILFLATICGVGGTLTAIDNLGQIGNSLGYPKRSVSTFVSLVSIWNYYGRVVSGVVSEIFLIKYKFPRPLMLTMVLLLSCAGHLLIAFNVPGGLYVASVIIGFCFGAQWPLLFAIISEIFGLKYYSTLYNFGSVASPIGSYLLNVRVAGYLYDVEAGKQYKALGKTRVEGQDLNCIGTSCFKLSFIIIAAVTLFGVLVSMVLVIRTKKFYKSDIYKKFREKALAAEMEMAAPAAARSTVAKEDKDDVKGKVIGKGG