Gene Details:
- Gene ID: AT2G39120
- Gene Symbol: WTF9
- Gene Name: what is this factor 9
- Description: Ubiquitin carboxyl-terminal hydrolase family protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , petiole , hypocotyl , leaf apex , collective leaf structure , plant sperm cell
Literature:
- In-depth temporal transcriptome profiling reveals a crucial developmental switch with roles for RNA processing and organelle metabolism that are essential for germination in Arabidopsis. DOI: 10.1104/pp.111.183129 ; PMID: 21908688
- A PORR domain protein required for rpl2 and ccmF(C) intron splicing and for the biogenesis of c-type cytochromes in Arabidopsis mitochondria. DOI: 10.1111/j.1365-313X.2011.04849.x ; PMID: 22060106
- Mitochondrial Heat Shock Protein 60s Interact with What's This Factor 9 to Regulate RNA Splicing of ccmFC and rpl2. DOI: 10.1093/pcp/pcy199 ; PMID: 30289547
Sequences:
cDNA Sequence
- >AT2G39120.1
ACTGTCTTCTCCGATAGTCCGATTTCTATGTTCCCGTTAATTGGGGTTTTAGGGTTTTCCGATTAGTTCCACAATGCTCTCTATTCGCCGCCATGCCAAAACCGTAGCTTCCTCCTGCACCAACCTTACTCAGAAACGAACCTACGTCGACGTTTACATGAAATGGAAGAGAGATCCTTATTTCGACAACATCGAACACATCCTCCGATCATCTCAGCTCAAATCCGTCGTCTCTCTTAAGAACTGTATCGTCCAGGAACCTAATCGCTGCATTCCGATCTCTGCCATCTCCAAGAAGACTCGTCAATTCGATGTATCAACCAAAATCGCTCACTTCTTAAGGAAGTTTCCTTCAATCTTTGAAGAGTTCGTTGGTCCAGAGTATAATCTCCCATGGTTTAGATTGACACCAGAAGCAACAGAACTAGATAGGCAAGAGAGAGTCGTATACCAAACTTCTGCAGATGATTTGCGTGATAGGTTGAAGAAATTGATTCTGATGAGTAAAGATAATGTTTTGCCACTAAGTATAGTTCAAGGAATGAAATGGTATTTAGGTTTACCTGATGATTACTTGCAGTTTCCAGATATGAATTTAGATTCTTCGTTTAGGTTTGTGGATATGGAAGATGGAGTTAAAGGTTTAGCAGTAGATTATAATGGAGGAGATAAGGTTTTGTCTGTGTTGCAGAAGAATGCAATGAAGAAGAGAAGAGGAGAAGTGAGTTTAGAAGAGATTGAGTTTCCTCTGTTTCCATCAAAAGGTTGTAGATTGAGAGTCAAGATTGAAGATTGGTTAATGGAGTTTCAAAAGCTTCCTTATGTATCACCATATGATGATTATTCATGTTTGGATCCAAGTAGTGATATAGCAGAGAAGAGAGTTGTTGGTTTTCTTCATGAATTGCTTTGTCTTTTCGTTGAGCATTCTGCTGAGAGGAAGAAGTTGTTATGTCTCAAGAAGCATTTTGGATTGCCGCAAAAGGTTCATAAGGCGTTTGAGAGACATCCGCAGATTTTCTACTTGTCTATGAAGAATAAAACTTGTACAGCTATTCTTAGAGAGCCTTATAGAGATAAAGCTAGTGTTGAAACACATCCTGTGTTGGGGGTAAGGAAGAAATACATCCAGTTGATGAAGAATTCAGAGTTGATTCTGAAGAGTCGAAGGAATAGTTTCGGGTTTAGGGACGAAGGGGTTGTAGATAAAGATTTGGATTTGGATTTTGAAGGCTAA
CDS Sequence
- >AT2G39120.1
ATGCTCTCTATTCGCCGCCATGCCAAAACCGTAGCTTCCTCCTGCACCAACCTTACTCAGAAACGAACCTACGTCGACGTTTACATGAAATGGAAGAGAGATCCTTATTTCGACAACATCGAACACATCCTCCGATCATCTCAGCTCAAATCCGTCGTCTCTCTTAAGAACTGTATCGTCCAGGAACCTAATCGCTGCATTCCGATCTCTGCCATCTCCAAGAAGACTCGTCAATTCGATGTATCAACCAAAATCGCTCACTTCTTAAGGAAGTTTCCTTCAATCTTTGAAGAGTTCGTTGGTCCAGAGTATAATCTCCCATGGTTTAGATTGACACCAGAAGCAACAGAACTAGATAGGCAAGAGAGAGTCGTATACCAAACTTCTGCAGATGATTTGCGTGATAGGTTGAAGAAATTGATTCTGATGAGTAAAGATAATGTTTTGCCACTAAGTATAGTTCAAGGAATGAAATGGTATTTAGGTTTACCTGATGATTACTTGCAGTTTCCAGATATGAATTTAGATTCTTCGTTTAGGTTTGTGGATATGGAAGATGGAGTTAAAGGTTTAGCAGTAGATTATAATGGAGGAGATAAGGTTTTGTCTGTGTTGCAGAAGAATGCAATGAAGAAGAGAAGAGGAGAAGTGAGTTTAGAAGAGATTGAGTTTCCTCTGTTTCCATCAAAAGGTTGTAGATTGAGAGTCAAGATTGAAGATTGGTTAATGGAGTTTCAAAAGCTTCCTTATGTATCACCATATGATGATTATTCATGTTTGGATCCAAGTAGTGATATAGCAGAGAAGAGAGTTGTTGGTTTTCTTCATGAATTGCTTTGTCTTTTCGTTGAGCATTCTGCTGAGAGGAAGAAGTTGTTATGTCTCAAGAAGCATTTTGGATTGCCGCAAAAGGTTCATAAGGCGTTTGAGAGACATCCGCAGATTTTCTACTTGTCTATGAAGAATAAAACTTGTACAGCTATTCTTAGAGAGCCTTATAGAGATAAAGCTAGTGTTGAAACACATCCTGTGTTGGGGGTAAGGAAGAAATACATCCAGTTGATGAAGAATTCAGAGTTGATTCTGAAGAGTCGAAGGAATAGTTTCGGGTTTAGGGACGAAGGGGTTGTAGATAAAGATTTGGATTTGGATTTTGAAGGCTAA
Protein Sequence
- >AT2G39120.1
MLSIRRHAKTVASSCTNLTQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDVSTKIAHFLRKFPSIFEEFVGPEYNLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSELILKSRRNSFGFRDEGVVDKDLDLDFEG