Information report for AT2G38700
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
Functional Keywords
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen tube cell , pollen
Literature and News
- Heterologous expression in Saccharomyces cerevisiae of an Arabidopsis thaliana cDNA encoding mevalonate diphosphate decarboxylase. DOI: 10.1023/a:1006181720100 ; PMID: 10344201
- Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism. DOI: 10.1023/a:1023005504702 ; PMID: 12777052
- Proteomic analysis and extensive protein identification from dry, germinating Arabidopsis seeds and young seedlings. DOI: 10.5483/bmbrep.2005.38.6.650 ; PMID: 16336779
- Nine 3-ketoacyl-CoA thiolases (KATs) and acetoacetyl-CoA thiolases (ACATs) encoded by five genes in Arabidopsis thaliana are targeted either to peroxisomes or cytosol but not to mitochondria. DOI: 10.1007/s11103-006-9075-1 ; PMID: 17120136
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Peroxisomal localisation of the final steps of the mevalonic acid pathway in planta. DOI: 10.1007/s00425-011-1444-6 ; PMID: 21655959
- Orthologs of the archaeal isopentenyl phosphate kinase regulate terpenoid production in plants. DOI: 10.1073/pnas.1504798112 ; PMID: 26216978
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: A0A178VRG6
- EMBL: CACRSJ010000105, CACSHJ010000088, LUHQ01000002
- AlphaFoldDB: A0A178VRG6
- EnsemblPlants: AT2G38700.1
- Gramene: AT2G38700.1
- KEGG: ath:AT2G38700
- Orthologous matrix: LYCFPPK
- ExpressionAtlas: AT2G38700
- InterPro: IPR005935, IPR014721, IPR020568
- PANTHER: PTHR10977, PTHR10977:SF3
- SUPFAM: SSF54211, SSF55060
- Gene3D: 3.30.230.10, 3.30.70.890
- OrthoDB: A0A178VRG6
- SWISS-MODEL: A0A178VRG6
Homologs
- Zea mays GRMZM2G396451_P02, GRMZM2G396451_P01
Sequences
cDNA Sequence
- >AT2G38700.1
ATGGTTAATTTAAGAGTACACGCTTATTTCGTAAGAATATTTAAAAGTTGGGGGTGTTTATTTTGATTTTTTCGCATATTAAAAAATTAAGAATCATGAATCGCTTACGCATGTGCAGTTTGGACGCAACTGAATCGTACCAATGAGATCATCCTCCTTATTTTAATCTCCCACCTGATTTGAGCTGTTTCTTTCTCTTTCGAACTCTCCGTCACTTCCATTTCATTTCTATTTGAATCTTCTCAAAGCTACACAGATCTCTGAAATCGAAAAAGCTTGAGCTGTGTTAATGGCGGAGGAGAAATGGGTGGTGATGGTGACGGCGCAGACTCCAACGAATATCGCCGTGATTAAGTATTGGGGAAAGAGAGATGAGGTTCGGATTCTTCCCATTAATGATAGCATTAGCGTCACGCTTGATCCTGATCACCTCTGTACTCTCACCACCGTCGCTGTTAGTCCTTCCTTTGATCGAGATCGAATGTGGCTCAATGGCAAGGAAATCTCGCTTTCTGGAAGTAGGTACCAGAATTGCTTGAGGGAAATTCGAAGTCGTGCTGATGATGTAGAAGATAAAGAAAAGGGTATCAAGATTGCGAAGAAAGATTGGGAGAAGCTGCATCTGCACATTGCTTCTCATAACAACTTCCCTACTGCTGCTGGCTTAGCATCTTCTGCTGCTGGTTTTGCTTGCTTAGTTTTTGCTCTTGCCAAGTTGATGAATGTAAATGAAGATCCAAGCCAACTTTCTGCTATAGCAAGGCAAGGTTCAGGAAGTGCTTGCCGTAGTTTATTTGGGGGATTTGTCAAGTGGAATATGGGAAACAAAGAAGATGGAAGTGACAGTGTTGCAGTTCAACTGGTAGATGATAAGCACTGGGATGATCTTGTTATCATTATTGCTGTGGTTAGTTCACGACAGAAGGAAACAAGCAGCACCTCGGGAATGCGTGAGAGTGTTGAGACAAGTTTGCTTTTACAGCATAGAGCAAAGGAAGTTGTCCCAGTACGGATTTTGCAAATGGAAGAAGCTATAAAGAATCGAGATTTCACATCTTTTACAAAATTGACGTGTTCAGACAGTAATCAGTTTCATGCTGTTTGTATGGATACATCTCCACCCATATTCTACATGAATGACACCTCCCACAGGATAATCAGCTTAGTTGAAAAGTGGAACCGTTCTGCCGGTACACCAGAGATTGCTTATACATTTGATGCTGGCCCAAATGCAGTCATGATTGCAAGAAACAGGAAAGTAGCAGTTGAATTGCTGCAGGGGCTGCTCTACTGCTTCCCTCCTAAGCCTGACACAGACATGAAGAGTTACGTACTGGGGGATACATCGATAGTAAAAGAGGCAGGCTTGGAAGGAGAGCTTCCACAAGGAATTAAAGACAAAATTGGAAGTCAGGATCAAAAAGGTGAAGTGAGTTATTTTATATGCAGCAGACCTGGAAGAGGTCCTGTGGTGCTTCAAGACCAAACTCAAGCTCTTCTCCATCCTCAAACTGGCCTCCCCAAATAACCATTTCTATGTCTTGTTGTTACTTCAACTCTGAGATTTGCAACAGCTTCATCTTTTGCTTTGCCAGCTCCAACTCTTGTCCTAAGAGAGCACTCTTCTGAATCTTTTCCCAATTATTTGTGTTTACGTACAATTCTTCTGCATCGGGTGCAAAAAACAAAACAATCAATATTGCAAACGAATAAGATCTTGATGCTAAATCTGAGTGTATCATTCAAATCCAGAACAAGAAGAAGTTGTTGTACTGTAGTCCATATCGTATAAAAACACTAACCATACAAGATCTCGAAACCAAATCATGTGTTGCTGCTTTCACTTGTGACTCCATCGGAATTCCTGTTTCTTATTTCCCTAGTTTAATCTCTATTCACTGAATTTGATTATTGTCTATGCACCATGTAGTATTTAATTTGAT
CDS Sequence
- >AT2G38700.1
ATGGCGGAGGAGAAATGGGTGGTGATGGTGACGGCGCAGACTCCAACGAATATCGCCGTGATTAAGTATTGGGGAAAGAGAGATGAGGTTCGGATTCTTCCCATTAATGATAGCATTAGCGTCACGCTTGATCCTGATCACCTCTGTACTCTCACCACCGTCGCTGTTAGTCCTTCCTTTGATCGAGATCGAATGTGGCTCAATGGCAAGGAAATCTCGCTTTCTGGAAGTAGGTACCAGAATTGCTTGAGGGAAATTCGAAGTCGTGCTGATGATGTAGAAGATAAAGAAAAGGGTATCAAGATTGCGAAGAAAGATTGGGAGAAGCTGCATCTGCACATTGCTTCTCATAACAACTTCCCTACTGCTGCTGGCTTAGCATCTTCTGCTGCTGGTTTTGCTTGCTTAGTTTTTGCTCTTGCCAAGTTGATGAATGTAAATGAAGATCCAAGCCAACTTTCTGCTATAGCAAGGCAAGGTTCAGGAAGTGCTTGCCGTAGTTTATTTGGGGGATTTGTCAAGTGGAATATGGGAAACAAAGAAGATGGAAGTGACAGTGTTGCAGTTCAACTGGTAGATGATAAGCACTGGGATGATCTTGTTATCATTATTGCTGTGGTTAGTTCACGACAGAAGGAAACAAGCAGCACCTCGGGAATGCGTGAGAGTGTTGAGACAAGTTTGCTTTTACAGCATAGAGCAAAGGAAGTTGTCCCAGTACGGATTTTGCAAATGGAAGAAGCTATAAAGAATCGAGATTTCACATCTTTTACAAAATTGACGTGTTCAGACAGTAATCAGTTTCATGCTGTTTGTATGGATACATCTCCACCCATATTCTACATGAATGACACCTCCCACAGGATAATCAGCTTAGTTGAAAAGTGGAACCGTTCTGCCGGTACACCAGAGATTGCTTATACATTTGATGCTGGCCCAAATGCAGTCATGATTGCAAGAAACAGGAAAGTAGCAGTTGAATTGCTGCAGGGGCTGCTCTACTGCTTCCCTCCTAAGCCTGACACAGACATGAAGAGTTACGTACTGGGGGATACATCGATAGTAAAAGAGGCAGGCTTGGAAGGAGAGCTTCCACAAGGAATTAAAGACAAAATTGGAAGTCAGGATCAAAAAGGTGAAGTGAGTTATTTTATATGCAGCAGACCTGGAAGAGGTCCTGTGGTGCTTCAAGACCAAACTCAAGCTCTTCTCCATCCTCAAACTGGCCTCCCCAAATAA
Protein Sequence
- >AT2G38700.1
MAEEKWVVMVTAQTPTNIAVIKYWGKRDEVRILPINDSISVTLDPDHLCTLTTVAVSPSFDRDRMWLNGKEISLSGSRYQNCLREIRSRADDVEDKEKGIKIAKKDWEKLHLHIASHNNFPTAAGLASSAAGFACLVFALAKLMNVNEDPSQLSAIARQGSGSACRSLFGGFVKWNMGNKEDGSDSVAVQLVDDKHWDDLVIIIAVVSSRQKETSSTSGMRESVETSLLLQHRAKEVVPVRILQMEEAIKNRDFTSFTKLTCSDSNQFHAVCMDTSPPIFYMNDTSHRIISLVEKWNRSAGTPEIAYTFDAGPNAVMIARNRKVAVELLQGLLYCFPPKPDTDMKSYVLGDTSIVKEAGLEGELPQGIKDKIGSQDQKGEVSYFICSRPGRGPVVLQDQTQALLHPQTGLPK