Information report for AT2G38670
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- GO:0006646 — involved in — phosphatidylethanolamine biosynthetic process
- GO:0005741 — located in — mitochondrial outer membrane
- GO:0031966 — located in — mitochondrial membrane
- GO:0006646 — acts upstream of or within — phosphatidylethanolamine biosynthetic process
- GO:0005634 — located in — nucleus
- GO:0004306 — enables — ethanolamine-phosphate cytidylyltransferase activity
- GO:0005737 — is active in — cytoplasm
- GO:0005794 — located in — Golgi apparatus
- GO:0010119 — involved in — regulation of stomatal movement
- GO:0005739 — located in — mitochondrion
- CS92951 — ethanolamine-phosphate cytidylyltransferase activity is reduced to 74%. Seedling phosphatidylethanolamine content is reduced by 20%. Dwarf when grown at 8oC. Earlier senescence of cotyladons and mature leaves. Pale green and smaller seeds. Delay in embryo maturation. Reduced fertility.
- pect1-6 — embryo lethal. Embryos do not develop beyond the octant stage.
Functional Keywords
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen , pollen tube cell , pollen
Literature and News
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Regulation of phosphatidylcholine biosynthesis under salt stress involves choline kinases in Arabidopsis thaliana. DOI: 10.1016/j.febslet.2004.04.015 ; PMID: 15147879
- Changes in the endoplasmic reticulum lipid properties in response to low temperature in Brassica napus. DOI: 10.1016/j.plaphy.2004.10.001 ; PMID: 15596101
- Defects in CTP:PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE affect embryonic and postembryonic development in Arabidopsis. DOI: 10.1105/tpc.106.040840 ; PMID: 17189343
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Multiple lines of evidence localize signaling, morphology, and lipid biosynthesis machinery to the mitochondrial outer membrane of Arabidopsis. DOI: 10.1104/pp.111.183160 ; PMID: 21896887
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- Mitochondrial phosphatidylethanolamine level modulates Cyt c oxidase activity to maintain respiration capacity in Arabidopsis thaliana rosette leaves. DOI: 10.1093/pcp/pct104 ; PMID: 23872271
- Diurnal and circadian expression profiles of glycerolipid biosynthetic genes in Arabidopsis. DOI: 10.4161/psb.29715 ; PMID: 25763705
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- PHOSPHORYLETHANOLAMINE CYTIDYLYLTRANSFERASE 1 modulates flowering in a florigen-independent manner by regulating SVP. DOI: 10.1242/dev.193870 ; PMID: 33268452
- PECT1, a rate-limiting enzyme in phosphatidylethanolamine biosynthesis, is involved in the regulation of stomatal movement in Arabidopsis. DOI: 10.1111/tpj.16245 ; PMID: 37058128
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Regulation of phosphatidylcholine biosynthesis under salt stress involves choline kinases in Arabidopsis thaliana. DOI: 10.1016/j.febslet.2004.04.015 ; PMID: 15147879
Gene Resources
- UniProt: A0A178VVP1
- EMBL: CACRSJ010000105, CACSHJ010000088, LR881467
- AlphaFoldDB: A0A178VVP1
- EnsemblPlants: AT2G38670.1
- Gramene: AT2G38670.1
- KEGG: ath:AT2G38670
- Orthologous matrix: QCKYINA
- ExpressionAtlas: AT2G38670
- InterPro: IPR004821, IPR014729, IPR041723
- PANTHER: PTHR45780, PTHR45780:SF2
- SUPFAM: SSF52374
- Gene3D: 3.40.50.620
- OrthoDB: A0A178VVP1
- SWISS-MODEL: A0A178VVP1
- Conserved Domain Database: cd02173, cd02174
Homologs
- Brassica napus GSBRNA2T00140053001
- Brassica oleracea Bol014204
Sequences
cDNA Sequence
- >AT2G38670.1
TTTGTAAAACTCGAAACCGGTTTTTGATTCTTTTTTTCCTTCGAAACTTAAATGATATCTTTAAACCAAAACGAACCAAACTAAATCACACAATTACGATCCGGTTTGAAGATATTTTGTTGTCCGTAGGATTCTGATTCCGAGTCTCTAGTTCCAAAGAGAAGAGAACATCTGTGAGAGATCTGAGACGTCTGGAAATGTGAAGAAAACAAAAAAAAAAAAGATCTGAGAGAGAGAGTTTCGAAATTCTCGTGTTCGTAAGCAAAAATGGTTTGGGAGAAAGAGAAGATCGTCGGAAGTTGTATAGTCGGAGGAGCTGCGTTCGCCGTCGGAGCTTCTTTCCTTCATCTTTTCCTTAAAGGTGAGCTTCCGTTAGGATTAGGTTTAGGTTTGTCTTGTCCATGGCGCATTTTGAGAAAACGAAAACCTGTTCGCGTTTACATGGATGGTTGCTTCGATATGATGCACTATGGCCACTGCAACGCTCTTCGTCAAGCTCGTGCTCTCGGTGACCAATTGGTCGTCGGTGTTGTTTCCGACGAAGAAATTATAGCCAACAAAGGACCTCCTGTTACTCCTCTTCATGAAAGAATGACAATGGTGAAAGCTGTGAAGTGGGTGGATGAAGTTATATCTGATGCTCCTTACGCTATTACGGAAGATTTCATGAAGAAATTGTTCGATGAGTATCAGATCGATTACATTATCCATGGTGATGATCCTTGTGTTCTTCCTGATGGTACTGATGCTTATGCACTTGCTAAGAAGGCTGGTCGTTACAAGCAGATTAAGCGCACTGAAGGAGTTTCTAGCACTGATATCGTTGGTCGTATGCTTCTTTGTGTAAGAGAAAGATCCATTAGTGACACTCATAGTCGTTCCTCTCTGCAAAGGCAATTTAGTCATGGGCATAGTAGCCCAAAGTTTGAGGATGGAGCTTCTTCTGCTGGTACTCGTGTCTCGCATTTTCTTCCTACTTCCCGCAGGATTGTTCAGTTCTCCAATGGAAAGGGGCCAGGACCTGATGCACGCATTATCTACATAGATGGTGCTTTTGATCTTTTCCATGCTGGCCATGTTGAGATTCTTAGACGTGCTCGAGAGCTTGGAGACTTTCTTCTTGTTGGTATACATAATGACCAGACTGTCAGTGCTAAACGAGGAGCGCATCGCCCTATTATGAATCTCCATGAAAGGAGCTTAAGCGTTCTGGCGTGCCGCTACGTGGATGAGGTGATAATTGGTGCTCCATGGGAAGTGTCGAGAGATACGATCACGACATTTGACATCTCGTTGGTGGTACATGGGACAGTAGCCGAGAGCGATGATTTTCGAAAGGAGGAAGATAATCCGTATTCTGTACCAATTAGCATGGGCATATTCCAAGTTCTAGATAGCCCTCTTGATATCACAACGTCCACCATAATCAGGAGGATTGTAGCAAACCATGAAGCTTATCAGAAACGTAATGCGAAGAAGGAAGCTAGCGAGAAAAAGTATTACGAGCAGAAGTCGTTTGTGTCCGGAGACTGATAGAGCTATATGCTTAGCTTTTTAAATCTATCTACATCTTGTACTTTGACTATAGTAGGATGTTTTTGGTTGAGACTCCAAATGCTACATACTACATTTTGCTATCTAGTTTTTACTTTACATAAAGAGGGCCATTGATGGTTTTAGTACCAATTGCATCTTTTATTTTCACTCTTTTGGATCTTTCATTTTACCTTTTACTTACTTTATTTACTGCCACAAATATCCTTATTGGCTG
CDS Sequence
- >AT2G38670.1
ATGGTTTGGGAGAAAGAGAAGATCGTCGGAAGTTGTATAGTCGGAGGAGCTGCGTTCGCCGTCGGAGCTTCTTTCCTTCATCTTTTCCTTAAAGGTGAGCTTCCGTTAGGATTAGGTTTAGGTTTGTCTTGTCCATGGCGCATTTTGAGAAAACGAAAACCTGTTCGCGTTTACATGGATGGTTGCTTCGATATGATGCACTATGGCCACTGCAACGCTCTTCGTCAAGCTCGTGCTCTCGGTGACCAATTGGTCGTCGGTGTTGTTTCCGACGAAGAAATTATAGCCAACAAAGGACCTCCTGTTACTCCTCTTCATGAAAGAATGACAATGGTGAAAGCTGTGAAGTGGGTGGATGAAGTTATATCTGATGCTCCTTACGCTATTACGGAAGATTTCATGAAGAAATTGTTCGATGAGTATCAGATCGATTACATTATCCATGGTGATGATCCTTGTGTTCTTCCTGATGGTACTGATGCTTATGCACTTGCTAAGAAGGCTGGTCGTTACAAGCAGATTAAGCGCACTGAAGGAGTTTCTAGCACTGATATCGTTGGTCGTATGCTTCTTTGTGTAAGAGAAAGATCCATTAGTGACACTCATAGTCGTTCCTCTCTGCAAAGGCAATTTAGTCATGGGCATAGTAGCCCAAAGTTTGAGGATGGAGCTTCTTCTGCTGGTACTCGTGTCTCGCATTTTCTTCCTACTTCCCGCAGGATTGTTCAGTTCTCCAATGGAAAGGGGCCAGGACCTGATGCACGCATTATCTACATAGATGGTGCTTTTGATCTTTTCCATGCTGGCCATGTTGAGATTCTTAGACGTGCTCGAGAGCTTGGAGACTTTCTTCTTGTTGGTATACATAATGACCAGACTGTCAGTGCTAAACGAGGAGCGCATCGCCCTATTATGAATCTCCATGAAAGGAGCTTAAGCGTTCTGGCGTGCCGCTACGTGGATGAGGTGATAATTGGTGCTCCATGGGAAGTGTCGAGAGATACGATCACGACATTTGACATCTCGTTGGTGGTACATGGGACAGTAGCCGAGAGCGATGATTTTCGAAAGGAGGAAGATAATCCGTATTCTGTACCAATTAGCATGGGCATATTCCAAGTTCTAGATAGCCCTCTTGATATCACAACGTCCACCATAATCAGGAGGATTGTAGCAAACCATGAAGCTTATCAGAAACGTAATGCGAAGAAGGAAGCTAGCGAGAAAAAGTATTACGAGCAGAAGTCGTTTGTGTCCGGAGACTGA
Protein Sequence
- >AT2G38670.1
MVWEKEKIVGSCIVGGAAFAVGASFLHLFLKGELPLGLGLGLSCPWRILRKRKPVRVYMDGCFDMMHYGHCNALRQARALGDQLVVGVVSDEEIIANKGPPVTPLHERMTMVKAVKWVDEVISDAPYAITEDFMKKLFDEYQIDYIIHGDDPCVLPDGTDAYALAKKAGRYKQIKRTEGVSSTDIVGRMLLCVRERSISDTHSRSSLQRQFSHGHSSPKFEDGASSAGTRVSHFLPTSRRIVQFSNGKGPGPDARIIYIDGAFDLFHAGHVEILRRARELGDFLLVGIHNDQTVSAKRGAHRPIMNLHERSLSVLACRYVDEVIIGAPWEVSRDTITTFDISLVVHGTVAESDDFRKEEDNPYSVPISMGIFQVLDSPLDITTSTIIRRIVANHEAYQKRNAKKEASEKKYYEQKSFVSGD