Gene Details:

• Gene ID: AT2G38325
• Gene Symbol: MIR390, MIR390A
• Gene Name: MICRORNA 390, microRNA390A
• Description: microRNA ath-MIR390a precursor;(source:Araport11)
• TAIR Accession: locus:4010713691
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT2G38325.1

Gene Ontology:

• GO:0035195  — acts upstream of or within — miRNA-mediated gene silencing

Literature:

• microRNA-directed phasing during trans-acting siRNA biogenesis in plants.   DOI:  10.1016/j.cell.2005.04.004 ;  PMID:  15851028
• A two-hit trigger for siRNA biogenesis in plants.   DOI:  10.1016/j.cell.2006.09.032 ;  PMID:  17081978
• The mechanism selecting the guide strand from small RNA duplexes is different among argonaute proteins.   DOI:  10.1093/pcp/pcn043 ;  PMID:  18344228
• Triggering the formation of tasiRNAs in Arabidopsis thaliana: the role of microRNA miR173.   DOI:  10.1038/embor.2008.247 ;  PMID:  19180117
• Specificity of ARGONAUTE7-miR390 interaction and dual functionality in TAS3 trans-acting siRNA formation.   DOI:  10.1016/j.cell.2008.02.033 ;  PMID:  18342362
• Novel miR390-dependent transacting siRNA precursors in plants revealed by a PCR-based experimental approach and database analysis.   DOI:  10.1155/2009/952304 ;  PMID:  19859540
• Identification of MIR390a precursor processing-defective mutants in Arabidopsis by direct genome sequencing.   DOI:  10.1073/pnas.0913203107 ;  PMID:  20018656
• Auxin regulation of the microRNA390-dependent transacting small interfering RNA pathway in Arabidopsis lateral root development.   DOI:  10.1093/nar/gkp1128 ;  PMID:  19969544
• miR390, Arabidopsis TAS3 tasiRNAs, and their AUXIN RESPONSE FACTOR targets define an autoregulatory network quantitatively regulating lateral root growth.   DOI:  10.1105/tpc.109.072553 ;  PMID:  20363771
• Cytoplasmic Arabidopsis AGO7 accumulates in membrane-associated siRNA bodies and is required for ta-siRNA biogenesis.   DOI:  10.1038/emboj.2012.20 ;  PMID:  22327216
• RDR6-mediated synthesis of complementary RNA is terminated by miRNA stably bound to template RNA.   DOI:  10.1093/nar/gkr760 ;  PMID:  21930511
• MicroRNA superfamilies descended from miR390 and their roles in secondary small interfering RNA Biogenesis in Eudicots.   DOI:  10.1105/tpc.113.110957 ;  PMID:  23695981
• Arabidopsis ARGONAUTE7 selects miR390 through multiple checkpoints during RISC assembly.   DOI:  10.1038/embor.2013.73 ;  PMID:  23732541
• TAS3 Genes for small ta-siARF RNAs in plants belonging to subtribe Senecioninae: occurrence of prematurely terminated RNA precursors.   DOI:  NA ;  PMID:  24003511
• The role of microRNAs in the control of flowering time.   DOI:  10.1093/jxb/ert453 ;  PMID:  24474808
• New generation of artificial MicroRNA and synthetic trans-acting small interfering RNA vectors for efficient gene silencing in Arabidopsis.   DOI:  10.1104/pp.113.234989 ;  PMID:  24647477
• Highly specific gene silencing in a monocot species by artificial microRNAs derived from chimeric miRNA precursors.   DOI:  10.1111/tpj.12835 ;  PMID:  25809382
• Differentially expressed small RNAs in Arabidopsis galls formed by Meloidogyne javanica: a functional role for miR390 and its TAS3-derived tasiRNAs.   DOI:  10.1111/nph.13735 ;  PMID:  26542733
• Identification of miRNAs associated with dark-induced senescence in Arabidopsis.   DOI:  10.1186/s12870-015-0656-5 ;  PMID:  26530097
• A Reliable Protocol for In situ microRNAs Detection in Feeding Sites Induced by Root-Knot Nematodes.   DOI:  10.3389/fpls.2016.00966 ;  PMID:  27458466
• MicroRNAs Are Intensively Regulated during Induction of Somatic Embryogenesis in Arabidopsis.   DOI:  10.3389/fpls.2017.00018 ;  PMID:  28167951
• A single miR390 targeting event is sufficient for triggering TAS3-tasiRNA biogenesis in Arabidopsis.   DOI:  10.1093/nar/gkx119 ;  PMID:  28334969
• Arabidopsis thaliana miRNAs promote embryo pattern formation beginning in the zygote.   DOI:  10.1016/j.ydbio.2017.09.009 ;  PMID:  28912016
• Expression dynamics of miRNAs and their targets in seed germination conditions reveals miRNA-ta-siRNA crosstalk as regulator of seed germination.   DOI:  10.1038/s41598-017-18823-8 ;  PMID:  29352229
• Genome-wide profiling of sRNAs in the Verticillium dahliae-infected Arabidopsis roots.   DOI:  10.1080/21501203.2018.1426062 ;  PMID:  30181922
• Whole Mount in situ Localization of miRNAs and mRNAs During Somatic Embryogenesis in Arabidopsis.   DOI:  10.3389/fpls.2018.01277 ;  PMID:  30233621
• Disruption of miRNA sequences by TALENs and CRISPR/Cas9 induces varied lengths of miRNA production.   DOI:  10.1111/pbi.13315 ;  PMID:  31821678
• ARF5/MONOPTEROS directly regulates miR390 expression in the Arabidopsis thaliana primary root meristem.   DOI:  10.1002/pld3.116 ;  PMID:  31245759
• Rapid sequence and functional diversification of a miRNA superfamily targeting calcium signaling components in seed plants.   DOI:  10.1111/nph.18185 ;  PMID:  35485957
• Divergent regulation of auxin responsive genes in root-knot and cyst nematodes feeding sites formed in Arabidopsis.   DOI:  10.3389/fpls.2023.1024815 ;  PMID:  36875577

Sequences: