Information report for AT2G38320
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- GO:0045492 — acts upstream of or within — xylan biosynthetic process
- GO:0005794 — is active in — Golgi apparatus
- GO:0016413 — enables — O-acetyltransferase activity
- GO:1990538 — enables — xylan O-acetyltransferase activity
- GO:0005634 — located in — nucleus
- GO:0005794 — located in — Golgi apparatus
- tbl34/tbl35/esk1-1 — tbl34 esk1, tbl35 esk1 double mutant and tbl34 tbl35 esk1 triple mutants have more retarded plant growth and lower stem strength than wild type or esk1.
Functional Keywords
Literature and News
- Arabidopsis ESK1 encodes a novel regulator of freezing tolerance. DOI: 10.1111/j.1365-313X.2006.02994.x ; PMID: 17316173
- TRICHOME BIREFRINGENCE and its homolog AT5G01360 encode plant-specific DUF231 proteins required for cellulose biosynthesis in Arabidopsis. DOI: 10.1104/pp.110.153320 ; PMID: 20388664
- Involvement of TBL/DUF231 proteins into cell wall biology. DOI: 10.4161/psb.5.8.12414 ; PMID: 20657172
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- An integrative approach to the identification of Arabidopsis and rice genes involved in xylan and secondary wall development. DOI: 10.1371/journal.pone.0015481 ; PMID: 21124849
- Systematic identification of functional plant modules through the integration of complementary data sources. DOI: 10.1104/pp.112.196725 ; PMID: 22589469
- Transcriptional dynamics of two seed compartments with opposing roles in Arabidopsis seed germination. DOI: 10.1104/pp.113.223511 ; PMID: 23858430
- Roles of Arabidopsis TBL34 and TBL35 in xylan acetylation and plant growth. DOI: 10.1016/j.plantsci.2015.12.007 ; PMID: 26795157
- Regiospecific Acetylation of Xylan is Mediated by a Group of DUF231-Containing O-Acetyltransferases. DOI: 10.1093/pcp/pcx147 ; PMID: 29059346
- Molecular Mechanism of Polysaccharide Acetylation by the Arabidopsis Xylan O-acetyltransferase XOAT1. DOI: 10.1105/tpc.20.00028 ; PMID: 32354790
Gene Resources
- UniProt: A0A654EZX9
- EMBL: CACRSJ010000105
- AlphaFoldDB: A0A654EZX9
- EnsemblPlants: AT2G38320.1
- Gramene: AT2G38320.1
- KEGG: ath:AT2G38320
- Orthologous matrix: TEATPKM
- ExpressionAtlas: AT2G38320
- InterPro: IPR025846, IPR026057, IPR029962
- PANTHER: PTHR32285, PTHR32285:SF11
- SWISS-MODEL: A0A654EZX9
Homologs
- Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VG61HV, arahy.Tifrunner.gnm1.ann1.T8K23Z, arahy.Tifrunner.gnm1.ann1.XZ6HV0
- Brassica napus GSBRNA2T00106144001
- Brassica oleracea Bo5g127700
- Daucus carota DCAR_017590, DCAR_013290
- Oryza sativa OsTBL2, OsTBL1
- Vitis vinifera VIT_219s0014g00510
Sequences
cDNA Sequence
- >AT2G38320.1
GTCAACACAAAAAGTTTTAGAATTTATATTAGGAAAATGATTCATAAATGTATATATAGACAGCTACAGAAAATTGATTGACCACCAAACAACAAAATAACTTCAAGAAGGCTGGAGTTAAAAGGCAAGTAAGAGAAAGACACATCAATATAACCCAAAACAAAACATCATAACAGCAACAATAACAGACACATAACCAATGGCAAAGCGACAACTGTTGATGCTGGGTATTAGAACTAGCTTTCATACTATCGCCGCCGTGCTTGTGGCCGGATTAATATTCACTGCCGTGTTTTTGTCCAGAAACAGTTTGCCAAAGGAAAATCCTCAAAGCCACGGTGTTACGGATCGCGGAGGGGACAGTGGCAGAGAATGTAATTTGTTCGAAGGGAAATGGGTATTTGATAACGTATCATACCCTCTTTATAAAGAAGAAGATTGCAAGTTCATGTCTGACCAGTTGGCTTGTGAGAAGTTTGGGAGGAAAGATCTGAGTTACAAATTCTGGAGGTGGCAACCTCACACGTGTGATCTTCCCAGGTTTAATGGAACGAAGTTGCTGGAGAGGCTAAGAAATAAGAGGATGGTGTACGTAGGAGACTCTCTGAACAGAGGCCAATGGGTATCAATGGTGTGTATGGTTAGTTCGGTAATTACAAACCCAAAGGCGATGTATATGCACAACAATGGCTCTAACCTCATCACGTTCAAAGCTCTCGAATACAATGCTACAATAGACTACTATTGGGCTCCTTTGCTGGTGGAATCCAACTCGGACGACCCGACAAACCATAGATTCCCCGATCGGATAGTTCGGATCCAATCAATAGAAAAACATGCAAGGCATTGGACGAACTCTGATATCATTGTTTTCAACTCTTACTTATGGTGGAGAATGCCTCATATCAAGTCACTGTGGGGATCGTTTGAGAAATTAGATGGAATATACAAGGAAGTGGAGATGGTGAGAGTTTATGAAATGGCTTTGCAAACACTGTCTCAGTGGTTGGAGGTTCACGTTAACCCCAATATTACCAAACTTTTCTTCATGTCCATGTCTCCCACCCATGAAAGGGCTGAAGAATGGGGAGGAATACTTAATCAGAACTGTTATGGAGAAGCTAGTCTAATAGATAAAGAAGGATATACTGGAAGAGGGTCAGATCCAAAGATGATGAGAGTCTTAGAAAATGTGCTTGACGGGCTAAAAAATCGAGGATTAAACATGCAGATGATAAACATTACGCAACTATCAGAGTATCGAAAAGAAGGTCATCCTTCGATCTACAGAAAACAATGGGGAACAGTGAAGGAAAATGAAATCTCGAATCCAAGTAGTAACGCAGATTGTATACATTGGTGTTTGCCTGGAGTTCCTGATGTTTGGAATGAACTCCTTTATGCTTATATTCTTGACCATCATTCTAGTTGAAAACTACTATTATATCTTTTGTTTTTTTACCTATTCCACTTCAATTGTACAGTTGATTTCCTTACTCTCACTTCTTTTCTATCAAAAAAATTAACATGTTTTTCTTAATATGCCATTTCTTCAATGAATTGCTAGGTGAG - >AT2G38320.2
GTCAACACAAAAAGTTTTAGAATTTATATTAGGAAAATGATTCATAAATGTATATATAGACAGCTACAGAAAATTGATTGACCACCAAACAACAAAATAACTTCAAGAAGGCTGGAGTTAAAAGGCAAGTAAGAGAAAGACACATCAATATAACCCAAAACAAAACATCATAACAGCAACAATAACAGACACATAACCAATGGCAAAGCGACAACTGTTGATGCTGGGTATTAGAACTAGCTTTCATACTATCGCCGCCGTGCTTGTGGCCGGATTAATATTCACTGCCGTGTTTTTGTCCAGAAACAGTTTGCCAAAGGAAAATCCTCAAAGCCACGGTGTTACGGATCGCGGAGGGGACAGTGGCAGAGAATGTAATTTGTTCGAAGGGAAATGGGTATTTGATAACGTATCATACCCTCTTTATAAAGAAGAAGATTGCAAGTTCATGTCTGACCAGTTGGCTTGTGAGAAGTTTGGGAGGAAAGATCTGAGTTACAAATTCTGGAGGTGGCAACCTCACACGTGTGATCTTCCCAGGTTTAATGGAACGAAGTTGCTGGAGAGGCTAAGAAATAAGAGGATGGTGTACGTAGGAGACTCTCTGAACAGAGGCCAATGGGTATCAATGGTGTGTATGGTTAGTTCGGTAATTACAAACCCAAAGGCGATGTATATGCACAACAATGGCTCTAACCTCATCACGTTCAAAGCTCTCGAATACAATGCTACAATAGACTACTATTGGGCTCCTTTGCTGGTGGAATCCAACTCGGACGACCCGACAAACCATAGATTCCCCGATCGGATAGTTCGGATCCAATCAATAGAAAAACATGCAAGGCATTGGACGAACTCTGATATCATTGTTTTCAACTCTTACTTATGGTGGAGAATGCCTCATATCAAGTCACTGTGGGGATCGTTTGAGAAATTAGATGGAATATACAAGGAAGTGGAGATGGTGAGAGTTTATGAAATGGCTTTGCAAACACTGTCTCAGTGGTTGGAGGTTCACGTTAACCCCAATATTACCAAACTTTTCTTCATGTCCATGTCTCCCACCCATGAAAGGGCTGAAGAATGGGGAGGAATACTTAATCAGAACTGTTATGGAGAAGCTAGTCTAATAGATAAAGAAGGATATACTGGAAGAGGGTCAGATCCAAAGATGATGAGAGTCTTAGAAAATGTGCTTGACGGGCTAAAAAATCGAGGATTAAACATGCAGATGATAAACATTACGCAACTATCAGAGTATCGAAAAGAAGGTCATCCTTCGATCTACAGAAAACAATGGGGAACAGTGAAGGAAAATGAAATCTCGAATCCAAGTAGTAACGCAGATTGTATACATTGGTGTTTGCCTGGAGTTCCTGATGTTTGGAATGAACTCCTTTATGCTTATATTCTTGACCATCATTCTAGTTGAAAACTACTATTATATCTTTTGTTTTTTTACCTATTCCACTTCAATTGTACAGTTGATTTCCTTACTCTCACTTCTTTTCTATCAAAAAAATTAACATGTTTTTCTTAATATGCCATTTCTTCAATGAATTGCTAGGTGAG
CDS Sequence
- >AT2G38320.1
ATGGCAAAGCGACAACTGTTGATGCTGGGTATTAGAACTAGCTTTCATACTATCGCCGCCGTGCTTGTGGCCGGATTAATATTCACTGCCGTGTTTTTGTCCAGAAACAGTTTGCCAAAGGAAAATCCTCAAAGCCACGGTGTTACGGATCGCGGAGGGGACAGTGGCAGAGAATGTAATTTGTTCGAAGGGAAATGGGTATTTGATAACGTATCATACCCTCTTTATAAAGAAGAAGATTGCAAGTTCATGTCTGACCAGTTGGCTTGTGAGAAGTTTGGGAGGAAAGATCTGAGTTACAAATTCTGGAGGTGGCAACCTCACACGTGTGATCTTCCCAGGTTTAATGGAACGAAGTTGCTGGAGAGGCTAAGAAATAAGAGGATGGTGTACGTAGGAGACTCTCTGAACAGAGGCCAATGGGTATCAATGGTGTGTATGGTTAGTTCGGTAATTACAAACCCAAAGGCGATGTATATGCACAACAATGGCTCTAACCTCATCACGTTCAAAGCTCTCGAATACAATGCTACAATAGACTACTATTGGGCTCCTTTGCTGGTGGAATCCAACTCGGACGACCCGACAAACCATAGATTCCCCGATCGGATAGTTCGGATCCAATCAATAGAAAAACATGCAAGGCATTGGACGAACTCTGATATCATTGTTTTCAACTCTTACTTATGGTGGAGAATGCCTCATATCAAGTCACTGTGGGGATCGTTTGAGAAATTAGATGGAATATACAAGGAAGTGGAGATGGTGAGAGTTTATGAAATGGCTTTGCAAACACTGTCTCAGTGGTTGGAGGTTCACGTTAACCCCAATATTACCAAACTTTTCTTCATGTCCATGTCTCCCACCCATGAAAGGGCTGAAGAATGGGGAGGAATACTTAATCAGAACTGTTATGGAGAAGCTAGTCTAATAGATAAAGAAGGATATACTGGAAGAGGGTCAGATCCAAAGATGATGAGAGTCTTAGAAAATGTGCTTGACGGGCTAAAAAATCGAGGATTAAACATGCAGATGATAAACATTACGCAACTATCAGAGTATCGAAAAGAAGGTCATCCTTCGATCTACAGAAAACAATGGGGAACAGTGAAGGAAAATGAAATCTCGAATCCAAGTAGTAACGCAGATTGTATACATTGGTGTTTGCCTGGAGTTCCTGATGTTTGGAATGAACTCCTTTATGCTTATATTCTTGACCATCATTCTAGTTGA - >AT2G38320.2
ATGGCAAAGCGACAACTGTTGATGCTGGGTATTAGAACTAGCTTTCATACTATCGCCGCCGTGCTTGTGGCCGGATTAATATTCACTGCCGTGTTTTTGTCCAGAAACAGTTTGCCAAAGGAAAATCCTCAAAGCCACGGTGTTACGGATCGCGGAGGGGACAGTGGCAGAGAATGTAATTTGTTCGAAGGGAAATGGGTATTTGATAACGTATCATACCCTCTTTATAAAGAAGAAGATTGCAAGTTCATGTCTGACCAGTTGGCTTGTGAGAAGTTTGGGAGGAAAGATCTGAGTTACAAATTCTGGAGGTGGCAACCTCACACGTGTGATCTTCCCAGGTTTAATGGAACGAAGTTGCTGGAGAGGCTAAGAAATAAGAGGATGGTGTACGTAGGAGACTCTCTGAACAGAGGCCAATGGGTATCAATGGTGTGTATGGTTAGTTCGGTAATTACAAACCCAAAGGCGATGTATATGCACAACAATGGCTCTAACCTCATCACGTTCAAAGCTCTCGAATACAATGCTACAATAGACTACTATTGGGCTCCTTTGCTGGTGGAATCCAACTCGGACGACCCGACAAACCATAGATTCCCCGATCGGATAGTTCGGATCCAATCAATAGAAAAACATGCAAGGCATTGGACGAACTCTGATATCATTGTTTTCAACTCTTACTTATGGTGGAGAATGCCTCATATCAAGTCACTGTGGGGATCGTTTGAGAAATTAGATGGAATATACAAGGAAGTGGAGATGGTGAGAGTTTATGAAATGGCTTTGCAAACACTGTCTCAGTGGTTGGAGGTTCACGTTAACCCCAATATTACCAAACTTTTCTTCATGTCCATGTCTCCCACCCATGAAAGGGCTGAAGAATGGGGAGGAATACTTAATCAGAACTGTTATGGAGAAGCTAGTCTAATAGATAAAGAAGGATATACTGGAAGAGGGTCAGATCCAAAGATGATGAGAGTCTTAGAAAATGTGCTTGACGGGCTAAAAAATCGAGGATTAAACATGCAGATGATAAACATTACGCAACTATCAGAGTATCGAAAAGAAGGTCATCCTTCGATCTACAGAAAACAATGGGGAACAGTGAAGGAAAATGAAATCTCGAATCCAAGTAGTAACGCAGATTGTATACATTGGTGTTTGCCTGGAGTTCCTGATGTTTGGAATGAACTCCTTTATGCTTATATTCTTGACCATCATTCTAGTTGA
Protein Sequence
- >AT2G38320.1
MAKRQLLMLGIRTSFHTIAAVLVAGLIFTAVFLSRNSLPKENPQSHGVTDRGGDSGRECNLFEGKWVFDNVSYPLYKEEDCKFMSDQLACEKFGRKDLSYKFWRWQPHTCDLPRFNGTKLLERLRNKRMVYVGDSLNRGQWVSMVCMVSSVITNPKAMYMHNNGSNLITFKALEYNATIDYYWAPLLVESNSDDPTNHRFPDRIVRIQSIEKHARHWTNSDIIVFNSYLWWRMPHIKSLWGSFEKLDGIYKEVEMVRVYEMALQTLSQWLEVHVNPNITKLFFMSMSPTHERAEEWGGILNQNCYGEASLIDKEGYTGRGSDPKMMRVLENVLDGLKNRGLNMQMINITQLSEYRKEGHPSIYRKQWGTVKENEISNPSSNADCIHWCLPGVPDVWNELLYAYILDHHSS - >AT2G38320.2
MAKRQLLMLGIRTSFHTIAAVLVAGLIFTAVFLSRNSLPKENPQSHGVTDRGGDSGRECNLFEGKWVFDNVSYPLYKEEDCKFMSDQLACEKFGRKDLSYKFWRWQPHTCDLPRFNGTKLLERLRNKRMVYVGDSLNRGQWVSMVCMVSSVITNPKAMYMHNNGSNLITFKALEYNATIDYYWAPLLVESNSDDPTNHRFPDRIVRIQSIEKHARHWTNSDIIVFNSYLWWRMPHIKSLWGSFEKLDGIYKEVEMVRVYEMALQTLSQWLEVHVNPNITKLFFMSMSPTHERAEEWGGILNQNCYGEASLIDKEGYTGRGSDPKMMRVLENVLDGLKNRGLNMQMINITQLSEYRKEGHPSIYRKQWGTVKENEISNPSSNADCIHWCLPGVPDVWNELLYAYILDHHSS