Gene Details:
- Gene ID: AT2G32290
- Gene Symbol: BAM6, BMY5
- Gene Name: beta-amylase 6, BETA-AMYLASE 5
- Description: beta-amylase 6;(source:Araport11)
- TAIR Accession: locus:2062535
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
Gene Ontology:
- GO:0102229 — enables — amylopectin maltohydrolase activity
- GO:0005783 — located in — endoplasmic reticulum
- GO:0005576 — located in — extracellular region
- GO:0016161 — enables — beta-amylase activity
- GO:0009507 — located in — chloroplast
Function-related keywords:
- leaf lamina base , shoot system , vascular leaf , stamen , sepal , flower , cotyledon , petiole , leaf apex , collective leaf structure
Literature:
- Phylogenetic profiling of the Arabidopsis thaliana proteome: what proteins distinguish plants from other organisms? DOI: 10.1186/gb-2004-5-8-r53 ; PMID: 15287975
- Diurnal changes in the transcriptome encoding enzymes of starch metabolism provide evidence for both transcriptional and posttranscriptional regulation of starch metabolism in Arabidopsis leaves. DOI: 10.1104/pp.104.044347 ; PMID: 15347792
- Leaf starch degradation comes out of the shadows. DOI: 10.1016/j.tplants.2005.01.001 ; PMID: 15749471
- RNA interference of Arabidopsis beta-amylase8 prevents maltose accumulation upon cold shock and increases sensitivity of PSII photochemical efficiency to freezing stress. DOI: 10.1111/j.1365-313X.2005.02565.x ; PMID: 16297066
- Redox regulation of a novel plastid-targeted beta-amylase of Arabidopsis. DOI: 10.1104/pp.106.079186 ; PMID: 16698902
- Starch metabolism in Arabidopsis. DOI: 10.1199/tab.0160 ; PMID: 23393426
- β-Amylase1 and β-amylase3 are plastidic starch hydrolases in Arabidopsis That Seem to Be Adapted for Different Thermal, pH, and stress conditions. DOI: 10.1104/pp.114.246421 ; PMID: 25293962
- Review: The Arabidopsis β-amylase (BAM) gene family: Diversity of form and function. DOI: 10.1016/j.plantsci.2018.08.016 ; PMID: 30348315
- Involvement of five catalytically active Arabidopsis β-amylases in leaf starch metabolism and plant growth. DOI: 10.1002/pld3.199 ; PMID: 32072133
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Sequences:
cDNA Sequence
- >AT2G32290.1
ATTTAATTAATTTCACTGAAAAAATTATTTTTGTGTGTGTATGATCATAATGATTCCAGTAAATGATTTTTGTAGTTCCGTCAAGTGCAAGGTACCATGACAAGCGTATTAGGAATGATGAACCCTAATCTGATCAACGGAAGAAATCTCCACAAAGGATCTTCAATTTTTGTACAAGATAAAGAAACTAAAAAACGAGTCCAATGGAGATTATCAATCAAGGAGGGATCTCTAAGAACGCATCAAGCCACTGCTTCTTCTGCAACAGAACCAAAGGCGACAGAGTTCAATACGACGACGTATGAAGACAAAATGTTGACCAACTATGTTCCTGTCTACGTCATGCTTCAGCTTGGAGTCATCACGAACGATAACGTTCTTGAAAACGAAGAGAGTCTCAAGAAACAGCTCAAGAAACTGAAACAAAGTCAAGTAGATGGAGTGATGGTTGACGTATGGTGGGGAATCGTTGAATCAAAAGGTCCAAAGCAATATCAATGGAGTGCTTATAGAAACTTGTTTGCGATCGTACAAAGCTTTGGACTAAAGTTACAAGCTATAATGTCGTTTCATAGATGTGGAGGCAACATAGGAGACGATGTCAACATCCCGATACCGAAATGGGTACTCGAAATCGGGGATTCGAATCCGGATATCTTCTATACGAACAAGAGTGGTAATAGAAACAAAGAGTGTTTGTCTCTCTCTGTAGATAACTTGTCTCTCTTCAGAGGACGAACAGCTGTTGAGATGTATAGAGACTACATGAAGAGCTTTAGAGAGAACATGGAAGATTTCATAAGCTCTGGAGTTATAATAGACATTGAAGTAGGGCTTGGTCCTGCTGGAGAGCTTAGATATCCTTCTTACAGTGAGACTCAAGGATGGGTTTTTCCAGGAATTGGGGAATTTCAATGTTATGACAAGTATCTAAGATCAGACTATGAAGAAGAAGTTAGAAGAATCGGGCATCCAGAGTGGAAACTTCCGGAAAACGCAGGCGAATACAACAGTGTTCCAGGAGAAACAGAGTTTTTCGAGTACTCGAATGGGACTTACCTTAAGGAAGAAGGAAATTTCTTCTTGTCATGGTACTCCAAAAAGTTACTTCTCCATGGTGATCAGATTCTTGATGAAGCTAATAAAGTATTTCTCGGGTGTAAACTCAAGATAGCAGCAAAAGTCTCTGGAATCCATTGGTGGTACAAAACTGAAAGTCATGCTGCAGAACTTACGGCGGGTTATTACAATCTCAAAAACAGAGATGGTTATCGTGCGATTGCGAAAATAATGCGTAGACATCACGCTATCTTGAATTTCACTTGTCTAGAGATGAAAAACACAGAGCAACCAGCAAAAGCTAAGAGTGGACCTCAAGAACTTGTTCAACAAGTTTTGAGCTCTGGATGGAGAGAAGGGATTGAAGTTGCGGGCGAAAACGCGCTTCCAAGATTCGATAGAAATGGATATAACCAGATCATACTAAACGCAAGGCCTAATGGAGTTAACCAAGATGGTAAACCGAGGATGTTTGGGTTCACATATCTCAGACTGTCTGATAAACTTCTCAATGAACCAAATTTCTCAACGTTTAAAATGTTCTTGAAACGAATGCATGCGAACCAAGAGTATTGTTCAGAGCCTGAAAGGTATAATCACGAGCTGCTTCCGTTGGAAAGATCGAGAAACGATGAATCCTTGGAGATGTTTATGGAAGAAACAGAACCATTTGATCCATTTCCATGGCTGGACGAGACAGACATGAGTATTAGACCCTTTGAGAGTGTACTGTCTCTATTGCGAAGCACATTTTTGAGAAAGAAGTCCTAGAGAATATGCTAAGGGGAAATTCTATAAACGTATAAGATTTCTGAAGTAAATATGTAAAGATTTGAGATAAATATATAAAAGTAAATAATTCATCCTAATGATATAAATTTGAACCATTAGTTTTCTG
CDS Sequence
- >AT2G32290.1
ATGACAAGCGTATTAGGAATGATGAACCCTAATCTGATCAACGGAAGAAATCTCCACAAAGGATCTTCAATTTTTGTACAAGATAAAGAAACTAAAAAACGAGTCCAATGGAGATTATCAATCAAGGAGGGATCTCTAAGAACGCATCAAGCCACTGCTTCTTCTGCAACAGAACCAAAGGCGACAGAGTTCAATACGACGACGTATGAAGACAAAATGTTGACCAACTATGTTCCTGTCTACGTCATGCTTCAGCTTGGAGTCATCACGAACGATAACGTTCTTGAAAACGAAGAGAGTCTCAAGAAACAGCTCAAGAAACTGAAACAAAGTCAAGTAGATGGAGTGATGGTTGACGTATGGTGGGGAATCGTTGAATCAAAAGGTCCAAAGCAATATCAATGGAGTGCTTATAGAAACTTGTTTGCGATCGTACAAAGCTTTGGACTAAAGTTACAAGCTATAATGTCGTTTCATAGATGTGGAGGCAACATAGGAGACGATGTCAACATCCCGATACCGAAATGGGTACTCGAAATCGGGGATTCGAATCCGGATATCTTCTATACGAACAAGAGTGGTAATAGAAACAAAGAGTGTTTGTCTCTCTCTGTAGATAACTTGTCTCTCTTCAGAGGACGAACAGCTGTTGAGATGTATAGAGACTACATGAAGAGCTTTAGAGAGAACATGGAAGATTTCATAAGCTCTGGAGTTATAATAGACATTGAAGTAGGGCTTGGTCCTGCTGGAGAGCTTAGATATCCTTCTTACAGTGAGACTCAAGGATGGGTTTTTCCAGGAATTGGGGAATTTCAATGTTATGACAAGTATCTAAGATCAGACTATGAAGAAGAAGTTAGAAGAATCGGGCATCCAGAGTGGAAACTTCCGGAAAACGCAGGCGAATACAACAGTGTTCCAGGAGAAACAGAGTTTTTCGAGTACTCGAATGGGACTTACCTTAAGGAAGAAGGAAATTTCTTCTTGTCATGGTACTCCAAAAAGTTACTTCTCCATGGTGATCAGATTCTTGATGAAGCTAATAAAGTATTTCTCGGGTGTAAACTCAAGATAGCAGCAAAAGTCTCTGGAATCCATTGGTGGTACAAAACTGAAAGTCATGCTGCAGAACTTACGGCGGGTTATTACAATCTCAAAAACAGAGATGGTTATCGTGCGATTGCGAAAATAATGCGTAGACATCACGCTATCTTGAATTTCACTTGTCTAGAGATGAAAAACACAGAGCAACCAGCAAAAGCTAAGAGTGGACCTCAAGAACTTGTTCAACAAGTTTTGAGCTCTGGATGGAGAGAAGGGATTGAAGTTGCGGGCGAAAACGCGCTTCCAAGATTCGATAGAAATGGATATAACCAGATCATACTAAACGCAAGGCCTAATGGAGTTAACCAAGATGGTAAACCGAGGATGTTTGGGTTCACATATCTCAGACTGTCTGATAAACTTCTCAATGAACCAAATTTCTCAACGTTTAAAATGTTCTTGAAACGAATGCATGCGAACCAAGAGTATTGTTCAGAGCCTGAAAGGTATAATCACGAGCTGCTTCCGTTGGAAAGATCGAGAAACGATGAATCCTTGGAGATGTTTATGGAAGAAACAGAACCATTTGATCCATTTCCATGGCTGGACGAGACAGACATGAGTATTAGACCCTTTGAGAGTGTACTGTCTCTATTGCGAAGCACATTTTTGAGAAAGAAGTCCTAG
Protein Sequence
- >AT2G32290.1
MTSVLGMMNPNLINGRNLHKGSSIFVQDKETKKRVQWRLSIKEGSLRTHQATASSATEPKATEFNTTTYEDKMLTNYVPVYVMLQLGVITNDNVLENEESLKKQLKKLKQSQVDGVMVDVWWGIVESKGPKQYQWSAYRNLFAIVQSFGLKLQAIMSFHRCGGNIGDDVNIPIPKWVLEIGDSNPDIFYTNKSGNRNKECLSLSVDNLSLFRGRTAVEMYRDYMKSFRENMEDFISSGVIIDIEVGLGPAGELRYPSYSETQGWVFPGIGEFQCYDKYLRSDYEEEVRRIGHPEWKLPENAGEYNSVPGETEFFEYSNGTYLKEEGNFFLSWYSKKLLLHGDQILDEANKVFLGCKLKIAAKVSGIHWWYKTESHAAELTAGYYNLKNRDGYRAIAKIMRRHHAILNFTCLEMKNTEQPAKAKSGPQELVQQVLSSGWREGIEVAGENALPRFDRNGYNQIILNARPNGVNQDGKPRMFGFTYLRLSDKLLNEPNFSTFKMFLKRMHANQEYCSEPERYNHELLPLERSRNDESLEMFMEETEPFDPFPWLDETDMSIRPFESVLSLLRSTFLRKKS