Gene Details:

• Gene ID: AT2G32280
• Gene Symbol: VCC
• Gene Name: VASCULATURE COMPLEXITY AND CONNECTIVITY
• Description: GPI inositol-deacylase C, putative (DUF1218);(source:Araport11)
• TAIR Accession: locus:2062561
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT2G32280.1     AT2G32280.2

Plant Ontology Annotations:

• PO:0000037  — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
• PO:0008019  — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0009009  — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
• PO:0009025  — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
• PO:0009031  — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
• PO:0009046  — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
• PO:0009052  — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
• PO:0020038  — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
• PO:0020100  — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
• PO:0020137  — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
• PO:0025022  — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
• PO:0000263  — non-hair root epidermal cell — atrichoblast (exact), atricoblasto (Spanish, exact), 非毛根形成細胞、アトリコブラスト (Japanese, exact), non-hair cell (broad)

Gene Ontology:

• GO:0010588  — acts upstream of or within — cotyledon vascular tissue pattern formation
• GO:0009855  — acts upstream of or within — determination of bilateral symmetry
• GO:0048825  — acts upstream of or within — cotyledon development
• GO:0010087  — acts upstream of or within — phloem or xylem histogenesis
• GO:0048366  — acts upstream of or within — leaf development
• GO:0010305  — acts upstream of or within — leaf vascular tissue pattern formation
• GO:0005783  — colocalizes with — endoplasmic reticulum
• GO:0005515  — enables — protein binding

Germplasm Phenotype:

• SALK_023737C  — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:decreased,cold:decreased,oxidative stress:no change,osmotic stress:no change,salt stress:no change,ABA:no change,hypoxia:no change.
• SALK_023737C  — Abnormal leaves. Increased lobing of rosette leaves.
• SALK_047972C  — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:no change,osmotic stress:decreased,salt stress:no change,ABA:no change,hypoxia:no change.
• SALK_047972C  — Abnormal leaves. Increased lobing of rosette leaves.
• vcc-3  — Abnormal leaves. Increased lobing of rosette leaves.

Function-related keywords:

• shoot axis apex ,  leaf lamina base ,  root ,  shoot system ,  plant embryo ,  vascular leaf ,  sepal ,  flower ,  inflorescence flower pedicel ,  petiole ,  hypocotyl ,  leaf apex ,  collective leaf structure ,  non-hair root epidermal cell

Literature:

• Transcriptional regulation of NADP-dependent malate dehydrogenase: comparative genetics and identification of DNA-binding proteins.   DOI:  10.1007/s00239-007-9025-9 ;  PMID:  17925997
• A gene regulatory network for root epidermis cell differentiation in Arabidopsis.   DOI:  10.1371/journal.pgen.1002446 ;  PMID:  22253603
• The VASCULATURE COMPLEXITY AND CONNECTIVITY gene encodes a plant-specific protein required for embryo provasculature development.   DOI:  10.1104/pp.114.246314 ;  PMID:  25149602
• Members of the DEAL subfamily of the DUF1218 gene family are required for bilateral symmetry but not for dorsoventrality in Arabidopsis leaves.   DOI:  10.1111/nph.14898 ;  PMID:  29139551
• Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis.   DOI:  10.1111/nph.16071 ;  PMID:  31334862

Sequences: