Information report for AT2G32260
Gene Details
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Functional Descriptions
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0025195 — pollen tube cell — célula del tubo polínico (Spanish, exact), 花粉管細胞 (Japanese, exact)
- GO:0006656 — acts upstream of or within — phosphatidylcholine biosynthetic process
- GO:0006657 — involved in — CDP-choline pathway
- GO:0004105 — enables — choline-phosphate cytidylyltransferase activity
- GO:0005634 — located in — nucleus
- GO:0031210 — enables — phosphatidylcholine binding
- GO:0005737 — located in — cytoplasm
Functional Keywords
Literature and News
- Changes in the endoplasmic reticulum lipid properties in response to low temperature in Brassica napus. DOI: 10.1016/j.plaphy.2004.10.001 ; PMID: 15596101
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Isozyme-specific modes of activation of CTP:phosphorylcholine cytidylyltransferase in Arabidopsis thaliana at low temperature. DOI: 10.1093/pcp/pcp115 ; PMID: 19667100
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- PHOSPHATIDIC ACID PHOSPHOHYDROLASE Regulates Phosphatidylcholine Biosynthesis in Arabidopsis by Phosphatidic Acid-Mediated Activation of CTP:PHOSPHOCHOLINE CYTIDYLYLTRANSFERASE Activity. DOI: 10.1105/tpc.15.00037 ; PMID: 25862304
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Arabidopsis CTP:phosphocholine cytidylyltransferase 1 is phosphorylated and inhibited by sucrose nonfermenting 1-related protein kinase 1 (SnRK1). DOI: 10.1074/jbc.RA119.008047 ; PMID: 31439667
- Genome-wide characterization of plant CTP:phosphocholine cytidylyltransferases through evolutionary, biochemical, and structural analyses. DOI: 10.1111/tpj.16264 ; PMID: 37129256
Gene Resources
- UniProt: A0A384KL63
- EMBL: CACRSJ010000105, CACSHJ010000088, LR881467
- AlphaFoldDB: A0A384KL63
- EnsemblPlants: AT2G32260.1
- Gramene: AT2G32260.1
- KEGG: ath:AT2G32260
- Orthologous matrix: DEMTHRY
- ExpressionAtlas: AT2G32260
- InterPro: IPR004821, IPR014729, IPR041723
- PANTHER: PTHR10739, PTHR10739:SF56
- SUPFAM: SSF52374
- Gene3D: 3.40.50.620
- OrthoDB: A0A384KL63
- SWISS-MODEL: A0A384KL63
- Conserved Domain Database: cd02174
Homologs
- Brassica napus GSBRNA2T00140053001
- Brassica oleracea Bol014204
- Hordeum vulgare HORVU6Hr1G031590
Sequences
cDNA Sequence
- >AT2G32260.1
ATAAAATTACAAATGCCTGAACACAAAAATAAATAAAATTAGAATAATCAGTTTCCTCTAGAGGATATTCTTCGTCACAAAATTAAAAAAAAAAAGAGTAGGAGAAGAGGGAAGCGACTAGCACCTTTTGTAGTTTTCCGTTTATTTTCTGTATAAGGCGGGTGATTTCGGCTCCTTCATCGGAAATTATGAGCAACGTTATCGGCGATCGCACTGAAGACGGCCTTTCCACCGCCGCTGCGGCCTCTGGCTCTACGGCTGTCCAGAGTTCTCCTCCCACTGATCGTCCTGTCCGCGTCTACGCCGATGGGATCTACGATCTTTTCCACTTTGGTCATGCTCGATCTCTCGAACAAGCCAAATTAGCGTTTCCAAACAACACTTACCTTCTTGTTGGATGTTGCAATGATGAGACTACCCATAAGTACAAGGGAAGGACTGTAATGACTGCAGAAGAGCGATATGAATCACTTCGACATTGCAAGTGGGTGGATGAAGTCATCCCTGATGCACCATGGGTGGTCAACCAGGAGTTTCTTGACAAGCACCAGATTGACTATGTTGCCCACGATTCTCTTCCCTATGCTGATTCAAGCGGAGCTGGAAAGGATGTCTATGAATTTGTTAAGAAAGTTGGGAGGTTTAAGGAAACACAGCGAACTGAAGGAATATCGACCTCGGATATAATAATGAGAATAGTGAAAGATTACAATCAGTATGTCATGCGTAACTTGGATAGAGGATACTCAAGGGAAGATCTTGGAGTTAGCTTTGTCAAGGAAAAGAGACTTAGAGTTAATATGAGGCTAAAGAAACTCCAGGAGAGGGTCAAAGAACAACAAGAAAGAGTGGGAGAAAAGATCCAAACTGTAAAAATGCTGCGCAACGAGTGGGTAGAGAATGCAGATCGATGGGTCGCTGGATTTCTTGAAATATTTGAAGAAGGTTGCCATAAGATGGGAACTGCAATCGTAGACAGTATCCAAGAAAGGTTAATGAGACAAAAGTCGGCAGAGAGGCTGGAGAACGGTCAGGATGATGACACAGACGACCAGTTCTATGAAGAATACTTCGATCATGACATGGGTAGTGACGATGATGAAGATGAAAAATTCTACGACGAGGAAGAAGTAAAGGAAGAAGAGACAGAGAAAACTGTTATGACGGATGCTAAAGACAACAAGTAAGAACAAATTTGGCTTGCAGAAACCTCAGATTAGCTCTACTTATGGCCACTTCTACTAAACTCCCTTAAGCCTCGCACTCTCTCTCGAAATTCATCTACTTAACATATAATACCAATGTTTAGAAAGAGAGAGTGTGTGATGTGTTTGTTTGTGTGTGTTGAACAAACGAACGTGCGTGGTTGTCTTTGGTGAGTTGGTCTCATCTTTGTTGATTTTTGAATGCGCATGTATTTTTTTCTTCTTTTTCATGACGGGCAAAGTGTTATGAAGTACAATGCAATTGTCTAAAACAGGATAAGTCAATGGTTCGTGTGTGCCATAAAGTAAACATCGCTGTGTACATCTTCCATGTTCCAAACTCAACTCGTTTTCTTCAAATATTGAAATACAAATTGGTCAA - >AT2G32260.2
ATAAAATTACAAATGCCTGAACACAAAAATAAATAAAATTAGAATAATCAGTTTCCTCTAGAGGATATTCTTCGTCACAAAATTAAAAAAAAAAAGAGTAGGAGAAGAGGGAAGCGACTAGCACCTTTTGTAGTTTTCCGTTTATTTTCTGTATAAGGCGGGTGATTTCGGCTCCTTCATCGGAAATTATGAGCAACGTTATCGGCGATCGCACTGAAGACGGCCTTTCCACCGCCGCTGCGGCCTCTGGCTCTACGGCTGTCCAGAGTTCTCCTCCCACTGATCGTCCTGTCCGCGTCTACGCCGATGGGATCTACGATCTTTTCCACTTTGGTCATGCTCGATCTCTCGAACAAGCCAAATTAGCGTTTCCAAACAACACTTACCTTCTTGTTGGATGTTGCAATGATGAGACTACCCATAAGTACAAGGGAAGGACTGTAATGACTGCAGAAGAGCGATATGAATCACTTCGACATTGCAAGTGGGTGGATGAAGTCATCCCTGATGCACCATGGGTGGTCAACCAGGAGTTTCTTGACAAGCACCAGATTGACTATGTTGCCCACGATTCTCTTCCCTATGCTGATTCAAGCGGAGCTGGAAAGGATGTCTATGAATTTGTTAAGAAAGTTGGGAGGTTTAAGGAAACACAGCGAACTGAAGGAATATCGACCTCGGATATAATAATGAGAATAGTGAAAGATTACAATCAGTATGTCATGCGTAACTTGGATAGAGGATACTCAAGGGAAGATCTTGGAGTTAGCTTTGTCAAGGAAAAGAGACTTAGAGTTAATATGAGGCTAAAGAAACTCCAGGAGAGGGTCAAAGAACAACAAGAAAGAGTGGGAGAAAAGATCCAAACTGTAAAAATGCTGCGCAACGAGTGGGTAGAGAATGCAGATCGATGGGTCGCTGGATTTCTTGAAATATTTGAAGAAGGTTGCCATAAGATGGGAACTGCAATCGTAGACAGTATCCAAGAAAGGTTAATGAGACAAAAGTCGGCAGAGAGGCTGGAGAACGGTCAGGATGATGACACAGACGACCAGTTCTATGAAGAATACTTCGATCATGACATGGGTAGTGACGATGATGAAGATGAAAAATTCTACGACGAGGAAGAAGTAAAGGAAGAAGAGACAGAGAAAACTGTTATGACGGATGCTAAAGACAACAAGTAAGAACAAATTTGGCTTGCAGAAACCTCAGATTAGCTCTACTTATGGCCACTTCTACTAAACTCCCTTAAGCCTCGCACTCTCTCTCGAAATTCATCTACTTAACATATAATACCAATGTTTAGAAAGAGAGAGTGTGTGATGTGTTTGTTTGTGTGTGTTGAACAAACGAACGTGCGTGGTTGTCTTTGGTGAGTTGGTCTCATCTTTGTTGATTTTTGAATGCGCATGTATTTTTTTCTTCTTTTTCATGACGGGCAAAGTGTTATGAAGTACAATGCAATTGTCTAAAACAGGATAAGTCAATGGTTCGTGTGTGCCATAAAGTAAACATCGCTGTGTACATCTTCCATGTTCCAAACTCAACTCGTTTTCTTCAAATATTGAAATACAAATTGGTCAA
CDS Sequence
- >AT2G32260.1
ATGAGCAACGTTATCGGCGATCGCACTGAAGACGGCCTTTCCACCGCCGCTGCGGCCTCTGGCTCTACGGCTGTCCAGAGTTCTCCTCCCACTGATCGTCCTGTCCGCGTCTACGCCGATGGGATCTACGATCTTTTCCACTTTGGTCATGCTCGATCTCTCGAACAAGCCAAATTAGCGTTTCCAAACAACACTTACCTTCTTGTTGGATGTTGCAATGATGAGACTACCCATAAGTACAAGGGAAGGACTGTAATGACTGCAGAAGAGCGATATGAATCACTTCGACATTGCAAGTGGGTGGATGAAGTCATCCCTGATGCACCATGGGTGGTCAACCAGGAGTTTCTTGACAAGCACCAGATTGACTATGTTGCCCACGATTCTCTTCCCTATGCTGATTCAAGCGGAGCTGGAAAGGATGTCTATGAATTTGTTAAGAAAGTTGGGAGGTTTAAGGAAACACAGCGAACTGAAGGAATATCGACCTCGGATATAATAATGAGAATAGTGAAAGATTACAATCAGTATGTCATGCGTAACTTGGATAGAGGATACTCAAGGGAAGATCTTGGAGTTAGCTTTGTCAAGGAAAAGAGACTTAGAGTTAATATGAGGCTAAAGAAACTCCAGGAGAGGGTCAAAGAACAACAAGAAAGAGTGGGAGAAAAGATCCAAACTGTAAAAATGCTGCGCAACGAGTGGGTAGAGAATGCAGATCGATGGGTCGCTGGATTTCTTGAAATATTTGAAGAAGGTTGCCATAAGATGGGAACTGCAATCGTAGACAGTATCCAAGAAAGGTTAATGAGACAAAAGTCGGCAGAGAGGCTGGAGAACGGTCAGGATGATGACACAGACGACCAGTTCTATGAAGAATACTTCGATCATGACATGGGTAGTGACGATGATGAAGATGAAAAATTCTACGACGAGGAAGAAGTAAAGGAAGAAGAGACAGAGAAAACTGTTATGACGGATGCTAAAGACAACAAGTAA - >AT2G32260.2
ATGAGCAACGTTATCGGCGATCGCACTGAAGACGGCCTTTCCACCGCCGCTGCGGCCTCTGGCTCTACGGCTGTCCAGAGTTCTCCTCCCACTGATCGTCCTGTCCGCGTCTACGCCGATGGGATCTACGATCTTTTCCACTTTGGTCATGCTCGATCTCTCGAACAAGCCAAATTAGCGTTTCCAAACAACACTTACCTTCTTGTTGGATGTTGCAATGATGAGACTACCCATAAGTACAAGGGAAGGACTGTAATGACTGCAGAAGAGCGATATGAATCACTTCGACATTGCAAGTGGGTGGATGAAGTCATCCCTGATGCACCATGGGTGGTCAACCAGGAGTTTCTTGACAAGCACCAGATTGACTATGTTGCCCACGATTCTCTTCCCTATGCTGATTCAAGCGGAGCTGGAAAGGATGTCTATGAATTTGTTAAGAAAGTTGGGAGGTTTAAGGAAACACAGCGAACTGAAGGAATATCGACCTCGGATATAATAATGAGAATAGTGAAAGATTACAATCAGTATGTCATGCGTAACTTGGATAGAGGATACTCAAGGGAAGATCTTGGAGTTAGCTTTGTCAAGGAAAAGAGACTTAGAGTTAATATGAGGCTAAAGAAACTCCAGGAGAGGGTCAAAGAACAACAAGAAAGAGTGGGAGAAAAGATCCAAACTGTAAAAATGCTGCGCAACGAGTGGGTAGAGAATGCAGATCGATGGGTCGCTGGATTTCTTGAAATATTTGAAGAAGGTTGCCATAAGATGGGAACTGCAATCGTAGACAGTATCCAAGAAAGGTTAATGAGACAAAAGTCGGCAGAGAGGCTGGAGAACGGTCAGGATGATGACACAGACGACCAGTTCTATGAAGAATACTTCGATCATGACATGGGTAGTGACGATGATGAAGATGAAAAATTCTACGACGAGGAAGAAGTAAAGGAAGAAGAGACAGAGAAAACTGTTATGACGGATGCTAAAGACAACAAGTAA
Protein Sequence
- >AT2G32260.1
MSNVIGDRTEDGLSTAAAASGSTAVQSSPPTDRPVRVYADGIYDLFHFGHARSLEQAKLAFPNNTYLLVGCCNDETTHKYKGRTVMTAEERYESLRHCKWVDEVIPDAPWVVNQEFLDKHQIDYVAHDSLPYADSSGAGKDVYEFVKKVGRFKETQRTEGISTSDIIMRIVKDYNQYVMRNLDRGYSREDLGVSFVKEKRLRVNMRLKKLQERVKEQQERVGEKIQTVKMLRNEWVENADRWVAGFLEIFEEGCHKMGTAIVDSIQERLMRQKSAERLENGQDDDTDDQFYEEYFDHDMGSDDDEDEKFYDEEEVKEEETEKTVMTDAKDNK - >AT2G32260.2
MSNVIGDRTEDGLSTAAAASGSTAVQSSPPTDRPVRVYADGIYDLFHFGHARSLEQAKLAFPNNTYLLVGCCNDETTHKYKGRTVMTAEERYESLRHCKWVDEVIPDAPWVVNQEFLDKHQIDYVAHDSLPYADSSGAGKDVYEFVKKVGRFKETQRTEGISTSDIIMRIVKDYNQYVMRNLDRGYSREDLGVSFVKEKRLRVNMRLKKLQERVKEQQERVGEKIQTVKMLRNEWVENADRWVAGFLEIFEEGCHKMGTAIVDSIQERLMRQKSAERLENGQDDDTDDQFYEEYFDHDMGSDDDEDEKFYDEEEVKEEETEKTVMTDAKDNK