Information report for AT2G32210
Gene Details
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Functional Descriptions
- GO:0005515 — enables — protein binding
- GO:0009651 — acts upstream of or within — response to salt stress
- GO:0071456 — acts upstream of or within — cellular response to hypoxia
- GO:0048827 — acts upstream of or within — phyllome development
- GO:0009737 — acts upstream of or within — response to abscisic acid
- GO:0042803 — enables — protein homodimerization activity
- GO:0005886 — is active in — plasma membrane
- GO:0005886 — located in — plasma membrane
- GO:0042802 — enables — identical protein binding
- GO:0005737 — located in — cytoplasm
- GO:0010035 — acts upstream of or within — response to inorganic substance
- SALK_005698C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:no change,osmotic stress:no change,salt stress:decreased,ABA:no change,hypoxia:no change.
- SALK_077303C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:decreased,oxidative stress:no change,osmotic stress:no change,salt stress:no change,ABA:no change,hypoxia:no change.
Functional Keywords
Literature and News
- Arabidopsis transcriptome profiling indicates that multiple regulatory pathways are activated during cold acclimation in addition to the CBF cold response pathway. DOI: 10.1105/tpc.003483 ; PMID: 12172015
- Diverse RNA viruses elicit the expression of common sets of genes in susceptible Arabidopsis thaliana plants. DOI: 10.1046/j.1365-313x.2003.01625.x ; PMID: 12535341
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- PCC1: a merging point for pathogen defence and circadian signalling in Arabidopsis. DOI: 10.1007/s00425-003-1143-z ; PMID: 14614626
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- An Arabidopsis homeodomain transcription factor gene, HOS9, mediates cold tolerance through a CBF-independent pathway. DOI: 10.1073/pnas.0403166101 ; PMID: 15205481
- Transcriptional divergence of the duplicated oxidative stress-responsive genes in the Arabidopsis genome. DOI: 10.1111/j.1365-313X.2004.02295.x ; PMID: 15634198
- Genetic analysis of Arabidopsis GATA transcription factor gene family reveals a nitrate-inducible member important for chlorophyll synthesis and glucose sensitivity. DOI: 10.1111/j.1365-313X.2005.02568.x ; PMID: 16262716
- Analysis of the female gametophyte transcriptome of Arabidopsis by comparative expression profiling. DOI: 10.1104/pp.105.067314 ; PMID: 16299181
- The Arabidopsis root hair cell wall formation mutant lrx1 is suppressed by mutations in the RHM1 gene encoding a UDP-L-rhamnose synthase. DOI: 10.1105/tpc.105.038653 ; PMID: 16766693
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Identification, cloning and characterization of sis7 and sis10 sugar-insensitive mutants of Arabidopsis. DOI: 10.1186/1471-2229-8-104 ; PMID: 18854047
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- CYSTM, a Novel Non-Secreted Cysteine-Rich Peptide Family, Involved in Environmental Stresses in Arabidopsis thaliana. DOI: 10.1093/pcp/pcx202 ; PMID: 29272523
- Integrative Analysis from the Epigenome to Translatome Uncovers Patterns of Dominant Nuclear Regulation during Transient Stress. DOI: 10.1105/tpc.19.00463 ; PMID: 31519798
- Arabidopsis cysteine-rich trans-membrane module (CYSTM) small proteins play a protective role mainly against heat and UV stresses. DOI: 10.1071/FP19236 ; PMID: 32007127
- A family of pathogen-induced cysteine-rich transmembrane proteins is involved in plant disease resistance. DOI: 10.1007/s00425-021-03606-3 ; PMID: 33856567
Gene Resources
- UniProt: A0A178VLH4
- EMBL: CACRSJ010000105, CACSHJ010000088, LR881467
- AlphaFoldDB: A0A178VLH4
- EnsemblPlants: AT2G32210.1
- Gramene: AT2G32210.1
- KEGG: ath:AT2G32210
- Orthologous matrix: NTSHATM
- ExpressionAtlas: AT2G32210
- InterPro: IPR028144, IPR044850
- PANTHER: PTHR31568, PTHR31568:SF138
- OrthoDB: A0A178VLH4
Sequences
cDNA Sequence
- >AT2G32210.1
AATTCATTTCATAATCATACACCTCTCTACATTTGTTACTACTTTCTTCTAACTTGTTTTCAAAGAGAAATCACAATCTATCTGTTCCAAGATGAGTCAATACAGCCAAAACCAATCTTCAGGAGCTTATCCTACGCCGCCAGTGTCTACCGGCCCTTACGTGGCACCGCCACCGCTAGGTTACCCAACGAACGACACAAGTCATGCCACGGTGGCAACGGTGGAGACAAAGTCCAAGGGTGATGGATTCTTAAAAGGCTGTCTTGCGGCCATGTGTTGTTGTTGTGTCCTCGACGCATGCTTCTGAAGACTTAGATGGTTTATTTTGATTATCTTTGTATTTTGCTTTACCAAAATGATTCGACTAGGTTTATGACATTTGGTACTTCTATTTGTTAATTCATTTCTATATCACTCTTTCTTTTGCATTGTGTAATTTTATAAATTCTTAATATATCGTTTGTTTTCTCTTAGACATCTTCTAAACCACGCTAGATTCACATTTTTGACTTTATTACCGGTTAGTCAACGTGGACTTAAAATCAATTTAATAACACTATATAAGCCAAAGTTATAAACAATTAAAACTCTTGGGGTTAGAATGCAAATAATGAACAAATCGATGCGTATAAATATCTCCCGATAAAGCCCTAGAATCC - >AT2G32210.3
AATTCATTTCATAATCATACACCTCTCTACATTTGTTACTACTTTCTTCTAACTTGTTTTCAAAGAGAAATCACAATCTATCTGTTCCAAGATGAGTCAATACAGCCAAAACCAATCTTCAGGAGCTTATCCTACGCCGCCAGTGTCTACCGGCCCTTACGTGGCACCGCCACCGCTAGGTTACCCAACGAACGACACAAGTCATGCCACGGTGGCAACGGTGGAGACAAAGTCCAAGGGTGATGGATTCTTAAAAGGCTGTCTTGCGGCCATGTGTTGTTGTTGTGTCCTCGACGCATGCTTCTGAAGACTTAGATGGTTTATTTTGATTATCTTTGTATTTTGCTTTACCAAAATGATTCGACTAGGTTTATGACATTTGGTACTTCTATTTGTTAATTCATTTCTATATCACTCTTTCTTTTGCATTGTGTAATTTTATAAATTCTTAATATATCGTTTGTTTTCTCTTAGACATCTTCTAAACCACGCTAGATTCACATTTTTGACTTTATTACCGGTTAGTCAACGTGGACTTAAAATCAATTTAATAACACTATATAAGCCAAAGTTATAAACAATTAAAACTCTTGGGGTTAGAATGCAAATAATGAACAAATCGATGCGTATAAATATCTCCCGATAAAGCCCTAGAATCC - >AT2G32210.2
AATTCATTTCATAATCATACACCTCTCTACATTTGTTACTACTTTCTTCTAACTTGTTTTCAAAGAGAAATCACAATCTATCTGTTCCAAGATGAGTCAATACAGCCAAAACCAATCTTCAGGAGCTTATCCTACGCCGCCAGTGTCTACCGGCCCTTACGTGGCACCGCCACCGCTAGGTTACCCAACGAACGACACAAGTCATGCCACGGTGGCAACGGTGGAGACAAAGTCCAAGGGTGATGGATTCTTAAAAGGCTGTCTTGCGGCCATGTGTTGTTGTTGTGTCCTCGACGCATGCTTCTGAAGACTTAGATGGTTTATTTTGATTATCTTTGTATTTTGCTTTACCAAAATGATTCGACTAGGTTTATGACATTTGGTACTTCTATTTGTTAATTCATTTCTATATCACTCTTTCTTTTGCATTGTGTAATTTTATAAATTCTTAATATATCGTTTGTTTTCTCTTAGACATCTTCTAAACCACGCTAGATTCACATTTTTGACTTTATTACCGGTTAGTCAACGTGGACTTAAAATCAATTTAATAACACTATATAAGCCAAAGTTATAAACAATTAAAACTCTTGGGGTTAGAATGCAAATAATGAACAAATCGATGCGTATAAATATCTCCCGATAAAGCCCTAGAATCC
CDS Sequence
- >AT2G32210.1
ATGAGTCAATACAGCCAAAACCAATCTTCAGGAGCTTATCCTACGCCGCCAGTGTCTACCGGCCCTTACGTGGCACCGCCACCGCTAGGTTACCCAACGAACGACACAAGTCATGCCACGGTGGCAACGGTGGAGACAAAGTCCAAGGGTGATGGATTCTTAAAAGGCTGTCTTGCGGCCATGTGTTGTTGTTGTGTCCTCGACGCATGCTTCTGA - >AT2G32210.3
ATGAGTCAATACAGCCAAAACCAATCTTCAGGAGCTTATCCTACGCCGCCAGTGTCTACCGGCCCTTACGTGGCACCGCCACCGCTAGGTTACCCAACGAACGACACAAGTCATGCCACGGTGGCAACGGTGGAGACAAAGTCCAAGGGTGATGGATTCTTAAAAGGCTGTCTTGCGGCCATGTGTTGTTGTTGTGTCCTCGACGCATGCTTCTGA - >AT2G32210.2
ATGAGTCAATACAGCCAAAACCAATCTTCAGGAGCTTATCCTACGCCGCCAGTGTCTACCGGCCCTTACGTGGCACCGCCACCGCTAGGTTACCCAACGAACGACACAAGTCATGCCACGGTGGCAACGGTGGAGACAAAGTCCAAGGGTGATGGATTCTTAAAAGGCTGTCTTGCGGCCATGTGTTGTTGTTGTGTCCTCGACGCATGCTTCTGA
Protein Sequence
- >AT2G32210.1
MSQYSQNQSSGAYPTPPVSTGPYVAPPPLGYPTNDTSHATVATVETKSKGDGFLKGCLAAMCCCCVLDACF - >AT2G32210.3
MSQYSQNQSSGAYPTPPVSTGPYVAPPPLGYPTNDTSHATVATVETKSKGDGFLKGCLAAMCCCCVLDACF - >AT2G32210.2
MSQYSQNQSSGAYPTPPVSTGPYVAPPPLGYPTNDTSHATVATVETKSKGDGFLKGCLAAMCCCCVLDACF