Gene Details:
- Gene ID: AT2G32060
- Gene Symbol: eS12y
- Gene Name: Ribosomal Protein eS12y
- Description: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein;(source:Araport11)
- TAIR Accession: locus:2045417
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
- PO:0008019 — leaf lamina base — base de la lámina de la hoja (Spanish, exact), 葉身基部 (Japanese, exact)
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- PO:0009009 — plant embryo — embrión (Spanish, exact), 植物胚 (Japanese, exact), germ (related), embryo (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009029 — stamen — estambre (Spanish, exact), 雄蕊 (Japanese, exact), Poaceae stamen (narrow), Zea stamen (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009052 — inflorescence flower pedicel — 小花柄 (Japanese, related), pedicelo (Spanish, broad)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- PO:0020038 — petiole — pecíolo (Spanish, exact), 葉柄 (Japanese, exact)
- PO:0020100 — hypocotyl — hipocótile (Spanish, exact), 胚軸 (Japanese, exact)
- PO:0020137 — leaf apex — ápice de la hoja (Spanish, exact), 葉先 (Japanese, exact), leaf lamina apex (narrow), phyllid apex (narrow)
- PO:0025022 — collective leaf structure — estructura colectiva de hoja (Spanish, exact), leaf series (exact), 葉が集まった構造 (Japanese, exact), leaf whorl (narrow), rosette (narrow), cycle (broad), verticil (broad)
- PO:0025281 — pollen — polen (Spanish, exact), pollen grain (exact), 花粉 (Japanese, exact)
Gene Ontology:
- GO:0022626 — located in — cytosolic ribosome
- GO:0006412 — involved in — translation
- GO:0005634 — located in — nucleus
- GO:0003735 — enables — structural constituent of ribosome
- GO:0022627 — located in — cytosolic small ribosomal subunit
- GO:0022627 — part of — cytosolic small ribosomal subunit
- GO:0005777 — located in — peroxisome
Function-related keywords:
- shoot axis apex , leaf lamina base , root , shoot system , plant embryo , vascular leaf , stamen , sepal , flower , inflorescence flower pedicel , cotyledon , petiole , hypocotyl , leaf apex , collective leaf structure , pollen
Literature:
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- The Arabidopsis co-expression tool (ACT): a WWW-based tool and database for microarray-based gene expression analysis. DOI: 10.1111/j.1365-313X.2006.02681.x ; PMID: 16623895
- The role of a zinc finger-containing glycine-rich RNA-binding protein during the cold adaptation process in Arabidopsis thaliana. DOI: 10.1093/pcp/pcj047 ; PMID: 16608866
- An analysis of expressed sequence tags of developing castor endosperm using a full-length cDNA library. DOI: 10.1186/1471-2229-7-42 ; PMID: 17672910
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Differential phosphorylation of ribosomal proteins in Arabidopsis thaliana plants during day and night. DOI: 10.1371/journal.pone.0029307 ; PMID: 22195043
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Analysis of the Arabidopsis nuclear proteome and its response to cold stress. DOI: 10.1046/j.1365-313x.2003.01907.x ; PMID: 14617066
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- The role of a zinc finger-containing glycine-rich RNA-binding protein during the cold adaptation process in Arabidopsis thaliana. DOI: 10.1093/pcp/pcj047 ; PMID: 16608866
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Analysis of the Arabidopsis nuclear proteome and its response to cold stress. DOI: 10.1046/j.1365-313x.2003.01907.x ; PMID: 14617066
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- The role of a zinc finger-containing glycine-rich RNA-binding protein during the cold adaptation process in Arabidopsis thaliana. DOI: 10.1093/pcp/pcj047 ; PMID: 16608866
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Analysis of the Arabidopsis nuclear proteome and its response to cold stress. DOI: 10.1046/j.1365-313x.2003.01907.x ; PMID: 14617066
- Proteomic characterization of evolutionarily conserved and variable proteins of Arabidopsis cytosolic ribosomes. DOI: 10.1104/pp.104.053637 ; PMID: 15734919
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- The role of a zinc finger-containing glycine-rich RNA-binding protein during the cold adaptation process in Arabidopsis thaliana. DOI: 10.1093/pcp/pcj047 ; PMID: 16608866
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
Sequences:
cDNA Sequence
- >AT2G32060.2
AATATATAACTTCGCTACTCATTTTTTGCTCTTCGTTGCAGCCTCTCTCTCTTTAAGATTTGGAAAAGACCTTTGCTTCTCTTCGTTCGGAAAACCAGCTCAAAGATTCAATATGTCAGGTGATGAGGCTGTTGCTGCTCCTGTGGTTCCTCCTGTTGCTGAGGCAGCAGTGATCCCAGAGGACATGGATGTGAGTACTGCATTGGAGTTGACTGTAAGGAAATCTCGTGCTTATGGTGGTGTTGTTCGTGGTCTCCATGAAAGCGCTAAGCTTATTGAGAAGCGTAATGCTCAGCTCTGTGTCCTGGCTGAAGATTGCAACCAACCTGATTATGTCAAGCTTGTTAAAGCTCTTTGCGCTGACCACAGCATCAAATTGCTTACTGTTCCAAGTGCCAAAACACTCGGCGAATGGGCTGGTCTTTGCAAGATTGATTCTGAGGGCAATGCAAGGAAGGTTGTTGGATGCTCATGTCTCGTGATCAAGGATTTCGGTGAGGAGACAACTGCACTAAACATTGTCAAGAAGCATCTTGATTCTAACTAAATCAAGCAAAAAGGTCAAGTTTACAGATGCTTTCTTCTCAAAAGGAAACGCATTTTGTGGCCACTCTTTTTTTCTTTCCAGTCTTTTCTGTTTTTGACATTAAATACTCAGTAGTGGACATGTCTTGAGATTTGTTTGGAACATGAAAGTTTTGATGTTTATGTAGGTTCTTTCAGTTCGCTCATCAAGGTTTTATATTTTGCTTTCTTACCACGTAGTTCTACTTCCATTAAATGAAAATTTCAATTTCGGAAAAAAAAAACAAATTGACTTCTTGGTATACATAACAAAACCAAGCTAAGACAGACCTGTAGCAAGACCTAATTCTCCTAGGAAAAAAATAGTTTAGAAATTGTAACCAATCAGAAAAAAGGGAAAAAGAAAGAAAGAACGGGTTATCTATATAAGAGAGGAACTACAGATTGATCATTCCATTATTTTCTTTCGTTGCCATAGAAATTAAGAA - >AT2G32060.1
AATATATAACTTCGCTACTCATTTTTTGCTCTTCGTTGCAGCCTCTCTCTCTTTAAGATTTGGAAAAGACCTTTGCTTCTCTTCGTTCGGAAAACCAGCTCAAAGATTCAATATGTCAGGTGATGAGGCTGTTGCTGCTCCTGTGGTTCCTCCTGTTGCTGAGGCAGCAGTGATCCCAGAGGACATGGATGTGAGTACTGCATTGGAGTTGACTGTAAGGAAATCTCGTGCTTATGGTGGTGTTGTTCGTGGTCTCCATGAAAGCGCTAAGCTTATTGAGAAGCGTAATGCTCAGCTCTGTGTCCTGGCTGAAGATTGCAACCAACCTGATTATGTCAAGCTTGTTAAAGCTCTTTGCGCTGACCACAGCATCAAATTGCTTACTGTTCCAAGTGCCAAAACACTCGGCGAATGGGCTGGTCTTTGCAAGATTGATTCTGAGGGCAATGCAAGGAAGGTTGTTGGATGCTCATGTCTCGTGATCAAGGATTTCGGTGAGGAGACAACTGCACTAAACATTGTCAAGAAGCATCTTGATTCTAACTAAATCAAGCAAAAAGGTCAAGTTTACAGATGCTTTCTTCTCAAAAGGAAACGCATTTTGTGGCCACTCTTTTTTTCTTTCCAGTCTTTTCTGTTTTTGACATTAAATACTCAGTAGTGGACATGTCTTGAGATTTGTTTGGAACATGAAAGTTTTGATGTTTATGTAGGTTCTTTCAGTTCGCTCATCAAGGTTTTATATTTTGCTTTCTTACCACGTAGTTCTACTTCCATTAAATGAAAATTTCAATTTCGGAAAAAAAAAACAAATTGACTTCTTGGTATACATAACAAAACCAAGCTAAGACAGACCTGTAGCAAGACCTAATTCTCCTAGGAAAAAAATAGTTTAGAAATTGTAACCAATCAGAAAAAAGGGAAAAAGAAAGAAAGAACGGGTTATCTATATAAGAGAGGAACTACAGATTGATCATTCCATTATTTTCTTTCGTTGCCATAGAAATTAAGAA - >AT2G32060.3
AATATATAACTTCGCTACTCATTTTTTGCTCTTCGTTGCAGCCTCTCTCTCTTTAAGATTTGGAAAAGACCTTTGCTTCTCTTCGTTCGGAAAACCAGCTCAAAGATTCAATATGTCAGGTGATGAGGCTGTTGCTGCTCCTGTGGTTCCTCCTGTTGCTGAGGCAGCAGTGATCCCAGAGGACATGGATGTGAGTACTGCATTGGAGTTGACTGTAAGGAAATCTCGTGCTTATGGTGGTGTTGTTCGTGGTCTCCATGAAAGCGCTAAGCTTATTGAGAAGCGTAATGCTCAGCTCTGTGTCCTGGCTGAAGATTGCAACCAACCTGATTATGTCAAGCTTGTTAAAGCTCTTTGCGCTGACCACAGCATCAAATTGCTTACTGTTCCAAGTGCCAAAACACTCGGCGAATGGGCTGGTCTTTGCAAGATTGATTCTGAGGGCAATGCAAGGAAGGTTGTTGGATGCTCATGTCTCGTGATCAAGGATTTCGGTGAGGAGACAACTGCACTAAACATTGTCAAGAAGCATCTTGATTCTAACTAAATCAAGCAAAAAGGTCAAGTTTACAGATGCTTTCTTCTCAAAAGGAAACGCATTTTGTGGCCACTCTTTTTTTCTTTCCAGTCTTTTCTGTTTTTGACATTAAATACTCAGTAGTGGACATGTCTTGAGATTTGTTTGGAACATGAAAGTTTTGATGTTTATGTAGGTTCTTTCAGTTCGCTCATCAAGGTTTTATATTTTGCTTTCTTACCACGTAGTTCTACTTCCATTAAATGAAAATTTCAATTTCGGAAAAAAAAAACAAATTGACTTCTTGGTATACATAACAAAACCAAGCTAAGACAGACCTGTAGCAAGACCTAATTCTCCTAGGAAAAAAATAGTTTAGAAATTGTAACCAATCAGAAAAAAGGGAAAAAGAAAGAAAGAACGGGTTATCTATATAAGAGAGGAACTACAGATTGATCATTCCATTATTTTCTTTCGTTGCCATAGAAATTAAGAA
CDS Sequence
- >AT2G32060.2
ATGTCAGGTGATGAGGCTGTTGCTGCTCCTGTGGTTCCTCCTGTTGCTGAGGCAGCAGTGATCCCAGAGGACATGGATGTGAGTACTGCATTGGAGTTGACTGTAAGGAAATCTCGTGCTTATGGTGGTGTTGTTCGTGGTCTCCATGAAAGCGCTAAGCTTATTGAGAAGCGTAATGCTCAGCTCTGTGTCCTGGCTGAAGATTGCAACCAACCTGATTATGTCAAGCTTGTTAAAGCTCTTTGCGCTGACCACAGCATCAAATTGCTTACTGTTCCAAGTGCCAAAACACTCGGCGAATGGGCTGGTCTTTGCAAGATTGATTCTGAGGGCAATGCAAGGAAGGTTGTTGGATGCTCATGTCTCGTGATCAAGGATTTCGGTGAGGAGACAACTGCACTAAACATTGTCAAGAAGCATCTTGATTCTAACTAA - >AT2G32060.1
ATGTCAGGTGATGAGGCTGTTGCTGCTCCTGTGGTTCCTCCTGTTGCTGAGGCAGCAGTGATCCCAGAGGACATGGATGTGAGTACTGCATTGGAGTTGACTGTAAGGAAATCTCGTGCTTATGGTGGTGTTGTTCGTGGTCTCCATGAAAGCGCTAAGCTTATTGAGAAGCGTAATGCTCAGCTCTGTGTCCTGGCTGAAGATTGCAACCAACCTGATTATGTCAAGCTTGTTAAAGCTCTTTGCGCTGACCACAGCATCAAATTGCTTACTGTTCCAAGTGCCAAAACACTCGGCGAATGGGCTGGTCTTTGCAAGATTGATTCTGAGGGCAATGCAAGGAAGGTTGTTGGATGCTCATGTCTCGTGATCAAGGATTTCGGTGAGGAGACAACTGCACTAAACATTGTCAAGAAGCATCTTGATTCTAACTAA - >AT2G32060.3
ATGTCAGGTGATGAGGCTGTTGCTGCTCCTGTGGTTCCTCCTGTTGCTGAGGCAGCAGTGATCCCAGAGGACATGGATGTGAGTACTGCATTGGAGTTGACTGTAAGGAAATCTCGTGCTTATGGTGGTGTTGTTCGTGGTCTCCATGAAAGCGCTAAGCTTATTGAGAAGCGTAATGCTCAGCTCTGTGTCCTGGCTGAAGATTGCAACCAACCTGATTATGTCAAGCTTGTTAAAGCTCTTTGCGCTGACCACAGCATCAAATTGCTTACTGTTCCAAGTGCCAAAACACTCGGCGAATGGGCTGGTCTTTGCAAGATTGATTCTGAGGGCAATGCAAGGAAGGTTGTTGGATGCTCATGTCTCGTGATCAAGGATTTCGGTGAGGAGACAACTGCACTAAACATTGTCAAGAAGCATCTTGATTCTAACTAA
Protein Sequence
- >AT2G32060.2
MSGDEAVAAPVVPPVAEAAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVIKDFGEETTALNIVKKHLDSN - >AT2G32060.1
MSGDEAVAAPVVPPVAEAAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVIKDFGEETTALNIVKKHLDSN - >AT2G32060.3
MSGDEAVAAPVVPPVAEAAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCSCLVIKDFGEETTALNIVKKHLDSN