Information report for AT2G31770
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009031 — sepal — sépalo (Spanish, exact), がく片 (Japanese, exact)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- GO:0006511 — involved in — ubiquitin-dependent protein catabolic process
- GO:0032436 — involved in — positive regulation of proteasomal ubiquitin-dependent protein catabolic process
- GO:0008270 — enables — zinc ion binding
- GO:0005737 — is active in — cytoplasm
- GO:0000151 — part of — ubiquitin ligase complex
- GO:0031624 — enables — ubiquitin conjugating enzyme binding
- GO:0061630 — enables — ubiquitin protein ligase activity
- GO:0005737 — located in — cytoplasm
- SALK_049255 — Homozygous mutant exhibits abnormal floral structures and embryo development.
- SALK_049255 — Late flowering.Decreased freezing tolerance.
Literature and News
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Identification and characterization of the ARIADNE gene family in Arabidopsis. A group of putative E3 ligases. DOI: 10.1104/pp.012781 ; PMID: 12529512
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Degree of Functional Divergence in Duplicates Is Associated with Distinct Roles in Plant Evolution. DOI: 10.1093/molbev/msaa302 ; PMID: 33290522
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Gene Resources
- UniProt: A0A5S9X301
- EMBL: CACSHJ010000088
- AlphaFoldDB: A0A5S9X301
- EnsemblPlants: AT2G31770.1
- Gramene: AT2G31770.1
- KEGG: ath:AT2G31770
- Orthologous matrix: NWMLANS
- ExpressionAtlas: AT2G31770
- InterPro: IPR001841, IPR002867, IPR013083
- PANTHER: PTHR11685
- SUPFAM: SSF57850
- PROSITE: PS00518, PS50089, PS51873
- Gene3D: 1.20.120.1750, 3.30.40.10
- OrthoDB: A0A5S9X301
- SWISS-MODEL: A0A5S9X301
- Conserved Domain Database: cd20346, cd23141
Homologs
- Daucus carota DCAR_022379
- Malus domestica MDP0000266267, MDP0000286589
- Pyrus bretschneideri Pbr011696.1, Pbr035981.1, Pbr037384.1
- Setaria italica Seita.8G217300
- Setaria viridis SEVIR_8G228300v2
- Zea mays Zm00001d007709
Sequences
cDNA Sequence
- >AT2G31770.1
ATGGACTTTTCAGATGATGACATGATTGATAACAAATCAGGGGAGGAGAATTACAGCTATGGTGGTGGTAACGAATCCGATGACTACAACGATGTGGTAGACACAATTATTCCATCGGAGAAAAGTTACGTGATTCTCAAGGAAGAAGACATTCTCAAGCTTCAAAGAGACGATATCGAACGAGTTTCATCGATTCTTTCTCTAAGCCAAGTGGAAGTGATTGTTCTGCTTCTTCACTATAACTGGTGTGTTAGTAAAGTCGAAGACGAATGGTTTACGGACGAAGAAAGAATCCGTAAAGCCGTTGGTTTATTGAAGGAGCCTGTCGTTGACTTCAATGGTGGAGAAAAAGACAAAAAATGTAGAAAAGTGAATATCCAATGTGGAATTTGCTTTGAATCATACACTCGAGAGGAAATTGCAAGGGTTTCTTGTGGTCATCCTTATTGCAAGACTTGCTGGGCTGGTTACATCACTACAAAAATCGAAGACGGTCCGGGATGTTTAAGGGTTAAATGTCCTGAGCCTTCTTGTTCCGCTGCTGTTGGTAAAGATATGATCGAGGATGTTACTGAGACAAAAGTTAACGAGAAGTATTCTAGATATATTCTTAGGTCTTATGTAGAAGATGGGAAGAAGATTAAATGGTGTCCATCACCGGGATGCGGATACGCGGTTGAATTCGGTGGAAGTGAAAGTAGTAGTTACGATGTTTCTTGTTTGTGTTCGTATAGGTTTTGCTGGAATTGCAGTGAAGATGCTCACAGTCCTGTGGATTGTGACACGGTTTCAAAATGGATATTCAAGAACCAGGATGAGTCGGAGAACAAGAATTGGATGCTTGCGAATTCAAAGCCTTGTCCTGAATGCAAGCGTCCTATCGAGAAGAACGATGGATGTAACCATATGACATGTTCAGCTCCGTGTGGACATGAGTTTTGTTGGATTTGTCTTAAAGCATATCGTCGTCACAGCGGTGCTTGCAATAGGTTTGTTGTGGAGCAGGCAGAAAGTAAGAGAGCATTGCTTCAGAGTGAAATCAAAAGATACACGCATTATTATGTAAGATGGGCAGAAAATCAATCGTCGAGGCTAAAGGCTATGAGAGATCTGGAGAAGTTGCAATCGGTGCAGCTTAAGGAGCTTAGTGACAATCAGTGCACGTCTGAAACTCAGCTTCAATTCACCGTAGATGCATGGCTTCAGATCATCGAATGTAGGAGAGTCTTGAAATGGACATATGCATATGGATACTACCTTCAAGATCTCCCCAAGCGGAAATTTTTTGAGTATTTGCAAGGGGAGGCTGAATCAGGTTTGGAGAGGCTTCATCATTGTGCAGAGAATGAGTTGAAACAATTTTTCATTAAAAGTGAAGATCCATCCGATACTTTCAATGCTTTCCGGATGAAATTAACTGGTTTGACTACAGTAACCAAAACCTACTTCGAAAATCTGGTGAAAGCTTTGGAGAATGGTCTGGTTGATGTGACACATAATGAATTCCCCCCAGATAATGAGACCAAATCAACACAAGAAAAATACGAAGAATATCAAGATTACGAAGACGATTTTCTCGAAACACAAAGGCTATATGATGAAGCTCTTTTAAGTGGCTGCTACTACGATTGA
CDS Sequence
- >AT2G31770.1
ATGGACTTTTCAGATGATGACATGATTGATAACAAATCAGGGGAGGAGAATTACAGCTATGGTGGTGGTAACGAATCCGATGACTACAACGATGTGGTAGACACAATTATTCCATCGGAGAAAAGTTACGTGATTCTCAAGGAAGAAGACATTCTCAAGCTTCAAAGAGACGATATCGAACGAGTTTCATCGATTCTTTCTCTAAGCCAAGTGGAAGTGATTGTTCTGCTTCTTCACTATAACTGGTGTGTTAGTAAAGTCGAAGACGAATGGTTTACGGACGAAGAAAGAATCCGTAAAGCCGTTGGTTTATTGAAGGAGCCTGTCGTTGACTTCAATGGTGGAGAAAAAGACAAAAAATGTAGAAAAGTGAATATCCAATGTGGAATTTGCTTTGAATCATACACTCGAGAGGAAATTGCAAGGGTTTCTTGTGGTCATCCTTATTGCAAGACTTGCTGGGCTGGTTACATCACTACAAAAATCGAAGACGGTCCGGGATGTTTAAGGGTTAAATGTCCTGAGCCTTCTTGTTCCGCTGCTGTTGGTAAAGATATGATCGAGGATGTTACTGAGACAAAAGTTAACGAGAAGTATTCTAGATATATTCTTAGGTCTTATGTAGAAGATGGGAAGAAGATTAAATGGTGTCCATCACCGGGATGCGGATACGCGGTTGAATTCGGTGGAAGTGAAAGTAGTAGTTACGATGTTTCTTGTTTGTGTTCGTATAGGTTTTGCTGGAATTGCAGTGAAGATGCTCACAGTCCTGTGGATTGTGACACGGTTTCAAAATGGATATTCAAGAACCAGGATGAGTCGGAGAACAAGAATTGGATGCTTGCGAATTCAAAGCCTTGTCCTGAATGCAAGCGTCCTATCGAGAAGAACGATGGATGTAACCATATGACATGTTCAGCTCCGTGTGGACATGAGTTTTGTTGGATTTGTCTTAAAGCATATCGTCGTCACAGCGGTGCTTGCAATAGGTTTGTTGTGGAGCAGGCAGAAAGTAAGAGAGCATTGCTTCAGAGTGAAATCAAAAGATACACGCATTATTATGTAAGATGGGCAGAAAATCAATCGTCGAGGCTAAAGGCTATGAGAGATCTGGAGAAGTTGCAATCGGTGCAGCTTAAGGAGCTTAGTGACAATCAGTGCACGTCTGAAACTCAGCTTCAATTCACCGTAGATGCATGGCTTCAGATCATCGAATGTAGGAGAGTCTTGAAATGGACATATGCATATGGATACTACCTTCAAGATCTCCCCAAGCGGAAATTTTTTGAGTATTTGCAAGGGGAGGCTGAATCAGGTTTGGAGAGGCTTCATCATTGTGCAGAGAATGAGTTGAAACAATTTTTCATTAAAAGTGAAGATCCATCCGATACTTTCAATGCTTTCCGGATGAAATTAACTGGTTTGACTACAGTAACCAAAACCTACTTCGAAAATCTGGTGAAAGCTTTGGAGAATGGTCTGGTTGATGTGACACATAATGAATTCCCCCCAGATAATGAGACCAAATCAACACAAGAAAAATACGAAGAATATCAAGATTACGAAGACGATTTTCTCGAAACACAAAGGCTATATGATGAAGCTCTTTTAAGTGGCTGCTACTACGATTGA
Protein Sequence
- >AT2G31770.1
MDFSDDDMIDNKSGEENYSYGGGNESDDYNDVVDTIIPSEKSYVILKEEDILKLQRDDIERVSSILSLSQVEVIVLLLHYNWCVSKVEDEWFTDEERIRKAVGLLKEPVVDFNGGEKDKKCRKVNIQCGICFESYTREEIARVSCGHPYCKTCWAGYITTKIEDGPGCLRVKCPEPSCSAAVGKDMIEDVTETKVNEKYSRYILRSYVEDGKKIKWCPSPGCGYAVEFGGSESSSYDVSCLCSYRFCWNCSEDAHSPVDCDTVSKWIFKNQDESENKNWMLANSKPCPECKRPIEKNDGCNHMTCSAPCGHEFCWICLKAYRRHSGACNRFVVEQAESKRALLQSEIKRYTHYYVRWAENQSSRLKAMRDLEKLQSVQLKELSDNQCTSETQLQFTVDAWLQIIECRRVLKWTYAYGYYLQDLPKRKFFEYLQGEAESGLERLHHCAENELKQFFIKSEDPSDTFNAFRMKLTGLTTVTKTYFENLVKALENGLVDVTHNEFPPDNETKSTQEKYEEYQDYEDDFLETQRLYDEALLSGCYYD