Information report for AT2G31610
Gene Details
|
|
Functional Descriptions
- GO:0005634 — is active in — nucleus
- GO:0009506 — located in — plasmodesma
- GO:0009507 — located in — chloroplast
- GO:0000325 — located in — plant-type vacuole
- GO:0022627 — located in — cytosolic small ribosomal subunit
- GO:0022626 — located in — cytosolic ribosome
- GO:0003735 — enables — structural constituent of ribosome
- GO:0006412 — involved in — translation
- GO:0003729 — enables — mRNA binding
- GO:0022627 — part of — cytosolic small ribosomal subunit
- GO:0005777 — located in — peroxisome
Functional Keywords
Literature and News
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- Transcriptional profiling of Arabidopsis tissues reveals the unique characteristics of the pollen transcriptome. DOI: 10.1104/pp.103.028241 ; PMID: 14500793
- a high-density colony array study (HDCA). DOI: 10.1046/j.1365-313x.2003.01847.x ; PMID: 12969430
- Analysis of detergent-resistant membranes in Arabidopsis. Evidence for plasma membrane lipid rafts. DOI: 10.1104/pp.104.053041 ; PMID: 15618420
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Stable isotope labeling of Arabidopsis thaliana cells and quantitative proteomics by mass spectrometry. DOI: 10.1074/mcp.M500190-MCP200 ; PMID: 16088002
- Towards the proteome of Brassica napus phloem sap. DOI: 10.1002/pmic.200500155 ; PMID: 16400686
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Differential phosphorylation of ribosomal proteins in Arabidopsis thaliana plants during day and night. DOI: 10.1371/journal.pone.0029307 ; PMID: 22195043
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- a high-density colony array study (HDCA). DOI: 10.1046/j.1365-313x.2003.01847.x ; PMID: 12969430
- The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. DOI: 10.1016/j.cub.2004.02.039 ; PMID: 15028209
- Analysis of detergent-resistant membranes in Arabidopsis. Evidence for plasma membrane lipid rafts. DOI: 10.1104/pp.104.053041 ; PMID: 15618420
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Membrane proteomic analysis of Arabidopsis thaliana using alternative solubilization techniques. DOI: 10.1021/pr060525b ; PMID: 17432890
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Comparative proteomic analysis of NaCl stress-responsive proteins in Arabidopsis roots. DOI: 10.1093/jxb/erm207 ; PMID: 17916636
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: A0A178VT49
- EMBL: CACRSJ010000105, CACSHJ010000088, LR881467
- AlphaFoldDB: A0A178VT49
- EnsemblPlants: AT2G31610.1
- Gramene: AT2G31610.1
- KEGG: ath:AT2G31610
- Orthologous matrix: NKKKWMI
- ExpressionAtlas: AT2G31610
- InterPro: IPR001351, IPR004044, IPR005703
- PANTHER: PTHR11760, PTHR11760:SF69
- SUPFAM: SSF54814, SSF54821
- PROSITE: PS50823
- Gene3D: 3.30.1140.32, 3.30.300.20
- OrthoDB: A0A178VT49
- SWISS-MODEL: A0A178VT49
- Conserved Domain Database: cd02413
Homologs
- Arachis hypogaea arahy.Tifrunner.gnm1.ann1.J8KP6L, arahy.Tifrunner.gnm1.ann1.AYL6ZU, arahy.Tifrunner.gnm1.ann1.3FR8RY
- Malus domestica MDP0000279204
Sequences
cDNA Sequence
- >AT2G31610.1
CTCAATTGGATGTGAGACCTAAGTTTCTGAATTAGGTCAATATAAATACTAAAATCATATCTGATAACGAACACGAGCTTACCGATTCTCTTCGTCTCAACATTTAGGGTTTCAGAGATCGGCTGATTTTCACATCCACAAGTATGGCGACTCAAATCAGCAAGAAGAGAAAGTTTGTAGCGGATGGTGTATTCTACGCTGAATTGAATGAGGTTCTCACAAGAGAGCTAGCAGAGGATGGTTACTCTGGTGTTGAGGTTAGGGTTACTCCAATGAGGACTGAGATTATCATCAGAGCTACTCGTACTCAGAATGTTCTTGGTGAGAAGGGGAGGAGAATTAGGGAATTGACATCTCTTGTCCAGAAGAGATTCAAGTTTCCAGTTGACAGTGTTGAGCTCTATGCTGAGAAGGTTAACAACAGAGGTCTCTGTGCCATTGCTCAGGCTGAGTCTCTACGTTACAAGCTTCTCGGTGGTCTTGCTGTTCGCAGGGCCTGTTATGGTGTTTTGAGATTTGTTATGGAGAGTGGAGCTAAGGGATGTGAGGTCATCGTGAGTGGAAAGCTCCGTGCTGCACGTGCTAAGTCCATGAAGTTCAAGGATGGTTACATGGTTTCATCTGGTCAACCAACTAAGGAATACATCGATGCTGCAGTGAGACATGTTTTGCTCAGACAGGGGGTGTTGGGAATCAAGGTGAAGATCATGCTTGACTGGGACCCTACGGGCAAATCAGGACCAAAGACACCATTGCCTGATGTTGTGATCATTCATGCTCCTAAAGATGATGTTGTCTACTCTGCACCTGCTCAGGCTGCTGCTCCAGTTACTCTTGTGCAAGAAGCTCCACTCACAACCGTAGATTACCCTGAGATGATTCCTCCAGTGGCCTAGAGAAGACCTTTTTTACTATTACTCCATGGGATTTTGTTCTTTTTGTTATAACTTTTCTACTTTTGACACTCTCTAGTCGTATCTCTTATATCCTCCAAGCAGACAAGTTTTTTCTCATGTTGTTTCTTAACCTATGTCAAGTTTTCTGGAGGTTGAATGCTTTTAGTTCCATGATTTTTTTGTTCTTAAGACTCGTAATAAGAAAAAGAATGACGACAACAATGCCTGGTATTTGATGTTGTTACTTTGAATTATCATTTTGCTCAGAACACTTTATTCGAAAATAACAAAAACTAAAATGTTTGGAGCTCTC
CDS Sequence
- >AT2G31610.1
ATGGCGACTCAAATCAGCAAGAAGAGAAAGTTTGTAGCGGATGGTGTATTCTACGCTGAATTGAATGAGGTTCTCACAAGAGAGCTAGCAGAGGATGGTTACTCTGGTGTTGAGGTTAGGGTTACTCCAATGAGGACTGAGATTATCATCAGAGCTACTCGTACTCAGAATGTTCTTGGTGAGAAGGGGAGGAGAATTAGGGAATTGACATCTCTTGTCCAGAAGAGATTCAAGTTTCCAGTTGACAGTGTTGAGCTCTATGCTGAGAAGGTTAACAACAGAGGTCTCTGTGCCATTGCTCAGGCTGAGTCTCTACGTTACAAGCTTCTCGGTGGTCTTGCTGTTCGCAGGGCCTGTTATGGTGTTTTGAGATTTGTTATGGAGAGTGGAGCTAAGGGATGTGAGGTCATCGTGAGTGGAAAGCTCCGTGCTGCACGTGCTAAGTCCATGAAGTTCAAGGATGGTTACATGGTTTCATCTGGTCAACCAACTAAGGAATACATCGATGCTGCAGTGAGACATGTTTTGCTCAGACAGGGGGTGTTGGGAATCAAGGTGAAGATCATGCTTGACTGGGACCCTACGGGCAAATCAGGACCAAAGACACCATTGCCTGATGTTGTGATCATTCATGCTCCTAAAGATGATGTTGTCTACTCTGCACCTGCTCAGGCTGCTGCTCCAGTTACTCTTGTGCAAGAAGCTCCACTCACAACCGTAGATTACCCTGAGATGATTCCTCCAGTGGCCTAG
Protein Sequence
- >AT2G31610.1
MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAAAPVTLVQEAPLTTVDYPEMIPPVA